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Results for MligTC455_31196

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31196 1109 23.10 Mlig455_066769

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.940

 LIG3 Mlig455_066769 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=74.7]; DNA ligase N terminus [PF04675.16, score=38.3]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [Score=196, Expect=5e-58]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [Score=194, Expect=2e-58]} {Dmel: FBgn0038035, lig3, DNA ligase III, [Score=73.6, Expect=4e-14]} {Celegans: WBGene00010626, K07C5.3, [Score=97.8, Expect=1e-22]} {RNA1509_27005} {RNA1310_5001.2} {RNA815_6784.1}

Cumulative graph for MligTC455_31196

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.336 4.758 0.74984 1.00000
RegionR2 0.41 4.758 0.25997 0.64110
RegionR3 -0.004 4.758 0.98977 1.00000
RegionR4 0.387 4.758 0.28050 0.58802
RegionR5 -0.39 4.758 0.18945 0.47249
RegionR6 -0.71 4.758 0.03938 0.37257
RegionR7 0.111 4.758 0.79336 1.00000
RegionR8 0.533 4.758 0.30064 0.93120

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.464 4.758 0.71940 1.00000
RegenerationR2 0.205 4.758 0.45837 0.85158
RegenerationR3 0.302 4.758 0.35176 0.77179
RegenerationR4 -0.025 4.758 0.93821 1.00000
RegenerationR5 0.516 4.758 0.08905 0.45930
RegenerationR6 0.857 4.758 0.01378 0.14472
RegenerationBL 0.447 4.758 0.25176 0.60801
RegenerationTP -0.39 4.758 0.38680 0.82047


Genes with expression patterns similar to MligTC455_31196

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31196 1109 23.1 Mlig455_066769

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.940

 LIG3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066769 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=74.7]; DNA ligase N terminus [PF04675.16, score=38.3]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [Score=196, Expect=5e-58]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [Score=194, Expect=2e-58]} {Dmel: FBgn0038035, lig3, DNA ligase III, [Score=73.6, Expect=4e-14]} {Celegans: WBGene00010626, K07C5.3, [Score=97.8, Expect=1e-22]} {RNA1509_27005} {RNA1310_5001.2} {RNA815_6784.1}
2. MligTC455_31195 1021 21.28 Mlig455_064603

Neo: -

Age: Down-Down-Up

 LIG3 5.895 0.999 0.991 0.970 0.978 0.983 0.974 Mlig455_064603 {REF} {Length: 3324} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=194.0]; DNA ligase N terminus [PF04675.16, score=108.9]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=73.5]; ATP dependent DNA ligase C terminal region [PF04679.17, score=32.8]; RNA ligase [PF09414.12, score=29.4]; mRNA capping enzyme, catalytic domain [PF01331.21, score=20.0]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [Score=715, Expect=0.0]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [Score=708, Expect=0.0]} {Dmel: FBgn0038035, lig3, DNA ligase III, [Score=488, Expect=6e-163]} {Celegans: WBGene00010626, K07C5.3, [RH, Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_7382_0_1, dd_Smed_v6_7382_0_1, [Score=145, Expect=3e-36]} {RNA1509_10062} {RNA1310_5001.1} {RNA815_6784.1}
3. MligTC455_31194 1024 21.34 Mlig455_040769

Neo: -

Age: logFC(26M/2M)=-0.312

 LIG3 5.891 0.994 0.991 0.973 0.976 0.981 0.976 Mlig455_040769 {REF} {Length: 3163} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=192.3]; DNA ligase N terminus [PF04675.16, score=107.5]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=73.2]; ATP dependent DNA ligase C terminal region [PF04679.17, score=67.4]; RNA ligase [PF09414.12, score=28.8]; DNA ligase 3 BRCT domain [PF16759.7, score=28.2]; mRNA capping enzyme, catalytic domain [PF01331.21, score=19.5]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [RH, Score=819, Expect=0.0]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [RH, Score=808, Expect=0.0]} {Dmel: FBgn0038035, lig3, DNA ligase III, [RH, Score=572, Expect=0.0]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=178, Expect=2e-46]} {Smed: dd_Smed_v6_7382_0_1, dd_Smed_v6_7382_0_1, [Score=180, Expect=2e-47]} {RNA1509_10062} {RNA1310_5001.1, RNA1509_10062} {RNA1509_10062, RNA815_6784.1}
4. MligTC455_48953 1852 38.59 Mlig455_011173

Neo: -

Age: -

 MPDZ 1.788 - - - - 0.965 0.823 Mlig455_011173 {REF} {Length: 1065} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=81.8]; PDZ domain [PF17820.3, score=33.1]; PDZ domain [PF13180.8, score=31.8]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=78.6, Expect=1e-16]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=82.8, Expect=3e-18]} {Dmel: FBgn0000008, a, arc, [Score=55.8, Expect=5e-09]} {Celegans: WBGene00011890, mics-1, MItoChondrial Scaffolding protei, [Score=46.6, Expect=3e-06]} {Smed: dd_Smed_v6_854_0_4, dd_Smed_v6_854_0_4, [Score=54.7, Expect=8e-09]} {RNA1509_22633} {RNA1310_4528.2, RNA1509_22633} {RNA1509_22633, RNA815_5539}
5. MligTC455_42511 737 15.35 Mlig455_015661

Neo: -

Age: -

Region-enriched R2: 1.560/0.00433
Region-enriched R7: 1.326/0.01296

 0.959 - - - - - 0.959 Mlig455_015661 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=98.9]} {Dmel: FBgn0033787, CG13321, [Score=76.6, Expect=9e-17]} {Smed: dd_Smed_v6_30758_0_1, dd_Smed_v6_30758_0_1, [Score=105, Expect=7e-29]} {RNA1509_21460, RNA1509_8735} {RNA1310_20408, RNA1509_21460, RNA1509_8735} {RNA1509_21460, RNA1509_8735, RNA815_10936.1}

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