Data search


search
Exact
Search

Results for MligTC455_31254

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31254 2231 46.49 Mlig455_037657, Mlig455_037660, Mlig455_037765

Neo: -

Age: Down-Down-Up

Mlig455_037657 {REF} {Length: 5604} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1}

Mlig455_037660 {REF} {Length: 3418} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1}

Mlig455_037765 {REF} {Length: 3517} {RNA1509_8228} {RNA1310_4535, RNA1509_8228} {RNA1509_8228, RNA815_2689.1}

Cumulative graph for MligTC455_31254

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.254 5.757 0.14107 0.74979
RegionR2 0.536 5.757 0.15720 0.49582
RegionR3 0.48 5.757 0.12549 0.60993
RegionR4 0.352 5.757 0.33845 0.65796
RegionR5 -0.051 5.757 0.86993 1.00000
RegionR6 0.234 5.757 0.46990 1.00000
RegionR7 -0.349 5.757 0.39858 1.00000
RegionR8 0.053 5.757 0.90940 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.586 5.757 0.04278 0.67581
RegenerationR2 1.308 5.757 0.00008 0.01047
RegenerationR3 1.175 5.757 0.00096 0.04870
RegenerationR4 0.864 5.757 0.02065 0.22786
RegenerationR5 1.008 5.757 0.00403 0.11387
RegenerationR6 1.002 5.757 0.00566 0.09116
RegenerationBL 0.721 5.757 0.04797 0.25109
RegenerationTP 0.364 5.757 0.39524 0.82594


Genes with expression patterns similar to MligTC455_31254

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31254 2231 46.49 Mlig455_037657, Mlig455_037660, Mlig455_037765

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_037657 {REF} {Length: 5604} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1}

Mlig455_037660 {REF} {Length: 3418} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1}

Mlig455_037765 {REF} {Length: 3517} {RNA1509_8228} {RNA1310_4535, RNA1509_8228} {RNA1509_8228, RNA815_2689.1}
2. MligTC455_16641 1524 31.75 Mlig455_043685, Mlig455_043752, Mlig455_047473

Neo: -

Age: Down-Up-Up

Region-enriched R8: 2.371/0.00579

2.591 - - - 0.798 0.955 0.838

Mlig455_043685 {REF} {Length: 1558} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.2]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=60.1, Expect=6e-10]} {RNA1509_51030} {RNA1310_23381} {RNA815_11328}

Mlig455_043752 {REF} {Length: 1659} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.5]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_51030} {RNA1310_23381} {RNA815_11328}

Mlig455_047473 {REF} {Length: 1659} {Pfam: Domain of unknown function (DUF4735) [PF15882.7, score=104.5]} {Smed: dd_Smed_v6_13989_0_1, dd_Smed_v6_13989_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_18230, RNA1509_43643, RNA1509_51030} {RNA1310_23381, RNA1509_18230, RNA1509_43643, RNA1509_51030} {RNA1509_18230, RNA1509_43643, RNA1509_51030, RNA815_11328}
3. MligTC455_45012 714 14.88 Mlig455_054906

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.349/0.01621

2.545 - - - 0.761 0.966 0.818 Mlig455_054906 {REF} {Length: 1243} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=69.8]; Ankyrin repeats (3 copies) [PF12796.9, score=61.5]; Ankyrin repeats (many copies) [PF13857.8, score=38.9]; Ankyrin repeat [PF13606.8, score=24.5]} {RNA1509_58714} {RNA1310_24810.1, RNA1509_58714} {RNA1509_58714, RNA815_13888.1}
4. MligTC455_07559 716 14.92 Mlig455_042485

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.569

CFAP77 1.674 - 0.723 - - 0.951 - Mlig455_042485 {REF} {Length: 2982} {Pfam: Domain of unknown function (DUF4483) [PF14825.8, score=89.8]} {Human: ENSG00000188523, CFAP77, cilia and flagella associated protein 77, [RH, Score=96.3, Expect=5e-23]} {Mouse: ENSMUSG00000079502, Cfap77, cilia and flagella associated protein 77, [RH, Score=101, Expect=4e-25]} {Smed: dd_Smed_v6_5179_0_1, dd_Smed_v6_5179_0_1, [RH, Score=160, Expect=1e-48]} {RNA1509_23437, RNA1509_28434, RNA1509_31495, RNA1509_34810} {RNA1310_32064, RNA1509_28434, RNA1509_31495, RNA1509_34810} {RNA1509_28434, RNA1509_31495, RNA1509_34810, RNA815_15649}
5. MligTC455_38174 1206 25.13 Mlig455_056208

Neo: -

Age: Up-Down-Down

Region-enriched R2: 1.702/0.00092

DNAH17 1.668 - 0.712 - - - 0.956 Mlig455_056208 {REF} {Length: 14678} {Pfam: Microtubule-binding stalk of dynein motor [PF12777.9, score=562.7]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=559.1]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=503.3]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=431.3]; Dynein heavy chain C-terminal domain [PF18199.3, score=346.4]; P-loop containing dynein motor region D4 [PF12780.9, score=303.0]; ATP-binding dynein motor region [PF12781.9, score=290.0]; P-loop containing dynein motor region [PF12775.9, score=251.9]; Dynein heavy chain AAA lid domain [PF18198.3, score=177.7]; AAA+ lid domain [PF17857.3, score=137.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=129.6]; Dynein heavy chain AAA lid domain [PF17852.3, score=96.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.7]; AAA ATPase domain [PF13191.8, score=28.0]; AAA domain [PF13401.8, score=26.3]; AAA domain [PF13604.8, score=22.0]; AAA domain [PF13245.8, score=21.9]; Sigma-54 interaction domain [PF00158.28, score=20.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.4]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [RH, Score=5962, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [RH, Score=5940, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [RH, Score=5970, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [RH, Score=5955, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [RH, Score=5710, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1108, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [RH, Score=6771, Expect=0.0]} {RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397} {RNA1310_128.1, RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397} {RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397, RNA815_30.1}
6. MligTC455_54118 239 4.98 Mlig455_023729

Neo: Int S/G2/M

Age: -

KLHL3 0.969 - - - - 0.969 - Mlig455_023729 {REF} {Length: 2998} {Pfam: Kelch motif [PF01344.27, score=109.7]; BTB And C-terminal Kelch [PF07707.17, score=94.5]; Kelch motif [PF13964.8, score=92.5]; Galactose oxidase, central domain [PF13415.8, score=65.9]; Galactose oxidase, central domain [PF13418.8, score=61.3]; Kelch motif [PF07646.17, score=40.2]; BTB/POZ domain [PF00651.33, score=36.7]; Kelch motif [PF13854.8, score=32.2]} {Human: ENSG00000146021, KLHL3, kelch like family member 3, [Score=200, Expect=9e-57]; ENSG00000109466, KLHL2, kelch like family member 2, [Score=192, Expect=4e-53]; ENSG00000076321, KLHL20, kelch like family member 20, [Score=191, Expect=7e-53]; ENSG00000179454, KLHL28, kelch like family member 28, [Score=190, Expect=1e-52]} {Mouse: ENSMUSG00000014164, Klhl3, kelch-like 3, [Score=199, Expect=3e-56]; ENSMUSG00000020948, Klhl28, kelch-like 28, [Score=192, Expect=2e-53]; ENSMUSG00000026705, Klhl20, kelch-like 20, [Score=191, Expect=4e-53]; ENSMUSG00000031605, Klhl2, kelch-like 2, Mayven, [Score=191, Expect=4e-53]} {Dmel: FBgn0001301, kel, kelch, [Score=189, Expect=1e-51]} {Celegans: WBGene00020030, R12E2.1, [Score=167, Expect=2e-44]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [Score=174, Expect=4e-47]} {RNA1509_56192} {RNA1310_6930.1} {RNA815_10606}
7. MligTC455_35639 3666 76.37 Mlig455_053362

Neo: -

Age: Down-Up-Up

UBE2A 0.966 - - - - 0.966 - Mlig455_053362 {REF} {Length: 1192} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=178.1]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [RH, Score=270, Expect=6e-94]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [RH, Score=268, Expect=2e-93]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [RH, Score=270, Expect=4e-94]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [RH, Score=268, Expect=2e-93]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [RH, Score=258, Expect=2e-89]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [RH, Score=268, Expect=4e-93]} {Smed: dd_Smed_v6_3543_0_1, dd_Smed_v6_3543_0_1, [RH, Score=244, Expect=2e-84]} {RNA1509_17248, RNA1509_28415, RNA1509_56837, RNA1509_6326} {RNA1310_29040.1, RNA1509_17248, RNA1509_28415, RNA1509_56837, RNA1509_6326} {RNA1509_17248, RNA1509_28415, RNA1509_56837, RNA1509_6326, RNA815_13231}
8. MligTC455_54258 796 16.59 Mlig455_001145, Mlig455_001307

Neo: -

Age: logFC(26M/2M)=0.299

ANKRD63 0.957 - - - - - 0.957

Mlig455_001145 {REF} {Length: 3319} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=7e-22]} {RNA1509_28990} {RNA1310_26685, RNA1509_28990} {RNA1509_28990, RNA815_11794}

Mlig455_001307 {REF} {Length: 2867} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=6e-22]} {RNA1509_18326, RNA1509_18681} {RNA1310_26685, RNA1509_18326, RNA1509_18681} {RNA1509_18326, RNA1509_18681, RNA815_11794}
9. MligTC455_17014 587 12.22 Mlig455_050676, Mlig455_069625

Neo: -

Age: Down-Up-Up

LHPP 0.956 - - - - 0.956 -

Mlig455_050676 {REF} {Length: 1235} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=67.1]; HAD-hyrolase-like [PF13242.8, score=52.2]; haloacid dehalogenase-like hydrolase [PF00702.28, score=23.6]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=21.0]} {Human: ENSG00000107902, LHPP, phospholysine phosphohistidine inorganic pyrophosphate phosphatase, [RH, Score=232, Expect=1e-75]} {Mouse: ENSMUSG00000030946, Lhpp, phospholysine phosphohistidine inorganic pyrophosphate phosphatase, [RH, Score=237, Expect=9e-78]} {Dmel: FBgn0032032, CG17294, [RH, Score=144, Expect=7e-42]} {Celegans: WBGene00007548, C13C4.4, [RH, Score=162, Expect=9e-49]} {Smed: dd_Smed_v6_8083_0_1, dd_Smed_v6_8083_0_1, [RH, Score=181, Expect=6e-56]} {RNA1509_29633} {RNA1310_53177} {RNA815_52285}

Mlig455_069625 {REF} {Length: 1704} {Pfam: HAD-hyrolase-like [PF13242.8, score=51.2]; Ankyrin repeats (3 copies) [PF12796.9, score=29.0]; Ankyrin repeats (many copies) [PF13637.8, score=24.4]; haloacid dehalogenase-like hydrolase [PF00702.28, score=20.1]} {Human: ENSG00000107902, LHPP, phospholysine phosphohistidine inorganic pyrophosphate phosphatase, [Score=152, Expect=3e-43]} {Mouse: ENSMUSG00000030946, Lhpp, phospholysine phosphohistidine inorganic pyrophosphate phosphatase, [Score=150, Expect=1e-42]} {Dmel: FBgn0032032, CG17294, [Score=105, Expect=4e-26]} {Celegans: WBGene00007548, C13C4.4, [Score=112, Expect=2e-28]} {Smed: dd_Smed_v6_8083_0_2, dd_Smed_v6_8083_0_2, [Score=120, Expect=1e-31]} {RNA1509_29633} {RNA1310_61091} {RNA815_52285}
10. MligTC455_42189 996 20.75 Mlig455_049567

Neo: -

Age: -

ATP1B1 0.95 - - - - 0.950 - Mlig455_049567 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=206.6]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [RH, Score=129, Expect=1e-34]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0032946, nrv3, nervana 3, [RH, Score=162, Expect=2e-47]} {Celegans: WBGene00007646, nkb-1, Sodium/potassium-transporting ATPase subunit beta-1, [Score=156, Expect=2e-45]} {Smed: dd_Smed_v6_7917_0_1, dd_Smed_v6_7917_0_1, [Score=228, Expect=1e-73]} {RNA1509_10587, RNA1509_45937} {RNA1310_12857.1, RNA1509_10587, RNA1509_45937} {RNA1509_10587, RNA1509_45937, RNA815_10364}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA