TomoSeq data search

Data search

Results for MligTC455_54258

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54258

796

16.59

Mlig455_001145, Mlig455_001307

Neo: -

Age: logFC(26M/2M)=0.299

ANKRD63

Mlig455_001145 {REF} {Length: 3319} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=7e-22]} {RNA1509_28990} {RNA1310_26685, RNA1509_28990} {RNA1509_28990, RNA815_11794}

Mlig455_001307 {REF} {Length: 2867} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=6e-22]} {RNA1509_18326, RNA1509_18681} {RNA1310_26685, RNA1509_18326, RNA1509_18681} {RNA1509_18326, RNA1509_18681, RNA815_11794}

Cumulative graph for MligTC455_54258

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.465	4.407	0.16481	0.78875
RegionR2	1.418	4.407	0.00654	0.07648
RegionR3	0.447	4.407	0.27826	0.82200
RegionR4	-0.626	4.407	0.22532	0.51673
RegionR5	-0.417	4.407	0.29450	0.62767
RegionR6	0.511	4.407	0.20950	0.78671
RegionR7	0.334	4.407	0.46567	1.00000
RegionR8	-0.203	4.407	0.72081	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.889	4.407	0.32348	1.00000
RegenerationR2	-0.782	4.407	0.08513	0.46873
RegenerationR3	-0.038	4.407	0.94383	1.00000
RegenerationR4	-0.135	4.407	0.79990	0.98642
RegenerationR5	-0.273	4.407	0.59659	0.90881
RegenerationR6	-1.46	4.407	0.00944	0.11951
RegenerationBL	-1.227	4.407	0.07006	0.30818
RegenerationTP	-0.689	4.407	0.31227	0.75684

Genes with expression patterns similar to MligTC455_54258

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54258	796	16.59	Mlig455_001145, Mlig455_001307	Neo: - Age: logFC(26M/2M)=0.299	ANKRD63	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001145 {REF} {Length: 3319} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=7e-22]} {RNA1509_28990} {RNA1310_26685, RNA1509_28990} {RNA1509_28990, RNA815_11794} Mlig455_001307 {REF} {Length: 2867} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=75.9]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeat [PF13606.8, score=59.1]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]} {Human: ENSG00000230778, ANKRD63, ankyrin repeat domain 63, [Score=66.6, Expect=3e-11]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=67.0, Expect=3e-11]; ENSMUSG00000078137, Ankrd63, ankyrin repeat domain 63, [Score=65.5, Expect=4e-11]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=59.3, Expect=5e-09]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.1, Expect=6e-22]} {RNA1509_18326, RNA1509_18681} {RNA1310_26685, RNA1509_18326, RNA1509_18681} {RNA1509_18326, RNA1509_18681, RNA815_11794}
2.	MligTC455_46535	153	3.19	Mlig455_045934	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.762	SLC17A6	1.733	-	-	0.777	-	-	0.956	Mlig455_045934 {REF} {Length: 2260} {Pfam: Major Facilitator Superfamily [PF07690.18, score=162.7]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=414, Expect=1e-138]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=401, Expect=1e-133]; ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=396, Expect=2e-131]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=414, Expect=1e-138]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=402, Expect=2e-134]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=393, Expect=5e-130]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=358, Expect=2e-117]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [Score=439, Expect=2e-148]} {RNA1509_48730} {RNA1310_31012} {RNA815_15101}
3.	MligTC455_38174	1206	25.13	Mlig455_056208	Neo: - Age: Up-Down-Down Region-enriched R2: 1.702/0.00092	DNAH17	1.701	-	-	0.723	-	-	0.978	Mlig455_056208 {REF} {Length: 14678} {Pfam: Microtubule-binding stalk of dynein motor [PF12777.9, score=562.7]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=559.1]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=503.3]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=431.3]; Dynein heavy chain C-terminal domain [PF18199.3, score=346.4]; P-loop containing dynein motor region D4 [PF12780.9, score=303.0]; ATP-binding dynein motor region [PF12781.9, score=290.0]; P-loop containing dynein motor region [PF12775.9, score=251.9]; Dynein heavy chain AAA lid domain [PF18198.3, score=177.7]; AAA+ lid domain [PF17857.3, score=137.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=129.6]; Dynein heavy chain AAA lid domain [PF17852.3, score=96.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.7]; AAA ATPase domain [PF13191.8, score=28.0]; AAA domain [PF13401.8, score=26.3]; AAA domain [PF13604.8, score=22.0]; AAA domain [PF13245.8, score=21.9]; Sigma-54 interaction domain [PF00158.28, score=20.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.4]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [RH, Score=5962, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [RH, Score=5940, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [RH, Score=5970, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [RH, Score=5955, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [RH, Score=5710, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1108, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [RH, Score=6771, Expect=0.0]} {RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397} {RNA1310_128.1, RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397} {RNA1509_140, RNA1509_25442, RNA1509_52758, RNA1509_7397, RNA815_30.1}
4.	MligTC455_37257	309	6.44	Mlig455_048693	Neo: - Age: logFC(26M/2M)=-0.514	GAS8	1.7	-	-	0.744	-	-	0.956	Mlig455_048693 {REF} {Length: 2216} {Pfam: Growth-arrest specific micro-tubule binding [PF13851.8, score=273.6]} {Human: ENSG00000141013, GAS8, growth arrest specific 8, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000040220, Gas8, growth arrest specific 8, [RH, Score=628, Expect=0.0]} {Dmel: FBgn0029667, Gas8, Growth arrest specific protein 8, [RH, Score=370, Expect=8e-124]} {Smed: dd_Smed_v6_2848_0_1, dd_Smed_v6_2848_0_1, [RH, Score=667, Expect=0.0]} {RNA1509_4695} {RNA1310_10753.1} {RNA815_4143}
5.	MligTC455_53642	1691	35.23	Mlig455_016919, Mlig455_017019	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.430 Region-specific R2: 1.934 Regeneration-downregulated BL: -2.204 Regeneration-depleted BL: -2.204	AC013470.2	1.693	-	-	0.735	-	-	0.958	Mlig455_016919 {REF} {Length: 1485} {Human: ENSG00000226690, AC013470.2, uncharacterized LOC102725191, [RH, Score=81.6, Expect=2e-17]} {Smed: dd_Smed_v6_9968_0_1, dd_Smed_v6_9968_0_1, [RH, Score=137, Expect=6e-39]} {RNA1509_15243, RNA1509_21629} {RNA1310_24799.1, RNA1509_15243, RNA1509_21629} {RNA1509_15243, RNA1509_21629, RNA815_10515.1} Mlig455_017019 {REF} {Length: 1382} {Human: ENSG00000226690, AC013470.2, uncharacterized LOC102725191, [Score=58.5, Expect=4e-10]} {Smed: dd_Smed_v6_9968_0_1, dd_Smed_v6_9968_0_1, [Score=82.0, Expect=5e-19]} {RNA1509_15243} {RNA1310_24799.1} {RNA815_10515.1}
6.	MligTC455_53643	317	6.6	Mlig455_016931	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.542	AC013470.2	0.981	-	-	-	-	-	0.981	Mlig455_016931 {REF} {Length: 1463} {Human: ENSG00000226690, AC013470.2, uncharacterized LOC102725191, [RH, Score=83.6, Expect=4e-18]} {Smed: dd_Smed_v6_9968_0_1, dd_Smed_v6_9968_0_1, [RH, Score=133, Expect=3e-37]} {RNA1509_15243} {RNA1310_24799.1} {RNA815_10515.1}
7.	MligTC455_52972	495	10.31	Mlig455_006569	Neo: - Age: -		0.973	-	-	-	-	-	0.973	Mlig455_006569 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=41.4]; AIG2-like family [PF13772.8, score=36.0]} {RNA1509_12874, RNA1509_28234, RNA1509_32161} {RNA1310_10210.1, RNA1509_12874, RNA1509_28234, RNA1509_32161} {RNA1509_12874, RNA1509_28234, RNA1509_32161, RNA815_7283}
8.	MligTC455_26725	1538	32.05	Mlig455_054429	Neo: - Age: -	CFAP299	0.963	-	-	-	-	-	0.963	Mlig455_054429 {REF} {Length: 1407} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4464) [PF14713.8, score=323.3]} {Human: ENSG00000197826, CFAP299, cilia and flagella associated protein 299, [RH, Score=310, Expect=1e-107]} {Mouse: ENSMUSG00000057816, Cfap299, cilia and flagella associated protein 299, [RH, Score=317, Expect=4e-110]} {Dmel: FBgn0038122, CG8138, [RH, Score=121, Expect=1e-33]} {Smed: dd_Smed_v6_11277_0_1, dd_Smed_v6_11277_0_1, [RH, Score=384, Expect=6e-137]} {RNA1509_38134, RNA1509_41292, RNA1509_4319} {RNA1310_31203.1, RNA1509_38134, RNA1509_41292} {RNA1509_38134, RNA1509_41292, RNA815_17451.1}
9.	MligTC455_19354	971	20.23	Mlig455_013378	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.307	SYNE1	0.962	-	-	-	-	-	0.962	Mlig455_013378 {REF} {Length: 21341} {Pfam: Spectrin repeat [PF00435.23, score=208.6]; Calponin homology (CH) domain [PF00307.33, score=139.1]; CAMSAP CH domain [PF11971.10, score=20.9]; Cholesterol uptake porter CUP1 of Mce4, putative [PF11887.10, score=19.4]} {Human: ENSG00000131018, SYNE1, spectrin repeat containing nuclear envelope protein 1, [RH, Score=472, Expect=9e-132]} {Mouse: ENSMUSG00000096054, Syne1, spectrin repeat containing, nuclear envelope 1, [Score=479, Expect=5e-134]} {Dmel: FBgn0261836, Msp300, Muscle-specific protein 300 kDa, [RH, Score=1383, Expect=0.0]} {Celegans: WBGene00006803, unc-70, Spectrin beta chain, [Score=231, Expect=1e-59]} {Smed: dd_Smed_v6_15904_0_2, dd_Smed_v6_15904_0_2, [Score=337, Expect=2e-101]} {RNA1509_1738, RNA1509_37491} {RNA1310_19.1, RNA1509_37491} {RNA1509_37491, RNA815_68}
10.	MligTC455_37310	188	3.92	Mlig455_043635	Neo: - Age: Down-Down-Up, logFC(26M/2M)=3.872	ARRDC4	0.958	-	-	-	-	-	0.958	Mlig455_043635 {REF} {Length: 2231} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=81.3]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=44.1]} {Human: ENSG00000140450, ARRDC4, arrestin domain containing 4, [Score=70.1, Expect=3e-12]; ENSG00000197070, ARRDC1, arrestin domain containing 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000026972, Arrdc1, arrestin domain containing 1, [Score=63.5, Expect=3e-10]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=78.2, Expect=2e-15]} {Celegans: WBGene00018060, arrd-18, ARRestin Domain protein, [Score=65.5, Expect=4e-11]} {RNA1509_13418} {RNA1310_36821} {RNA815_11006.1}
11.	MligTC455_31254	2231	46.49	Mlig455_037657, Mlig455_037660, Mlig455_037765	Neo: - Age: Down-Down-Up		0.957	-	-	-	-	-	0.957	Mlig455_037657 {REF} {Length: 5604} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1} Mlig455_037660 {REF} {Length: 3418} {RNA1509_8228} {RNA1310_3980} {RNA815_2689.1} Mlig455_037765 {REF} {Length: 3517} {RNA1509_8228} {RNA1310_4535, RNA1509_8228} {RNA1509_8228, RNA815_2689.1}
12.	MligTC455_04662	2358	49.13	Mlig455_056586, Mlig455_056607	Neo: - Age: -	ROPN1L	0.956	-	-	-	-	-	0.956	Mlig455_056586 {REF} {Length: 873} {TRANSSPLICED} {Human: ENSG00000145491, ROPN1L, rhophilin associated tail protein 1 like, [RH, Score=207, Expect=5e-67]} {Mouse: ENSMUSG00000022236, Ropn1l, ropporin 1-like, [RH, Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_4888_0_1, dd_Smed_v6_4888_0_1, [RH, Score=278, Expect=9e-96]} {RNA1509_37498} {RNA1310_39913} {RNA815_19368} Mlig455_056607 {REF} {Length: 872} {TRANSSPLICED} {Human: ENSG00000145491, ROPN1L, rhophilin associated tail protein 1 like, [RH, Score=207, Expect=5e-67]} {Mouse: ENSMUSG00000022236, Ropn1l, ropporin 1-like, [RH, Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_4888_0_1, dd_Smed_v6_4888_0_1, [RH, Score=278, Expect=9e-96]} {RNA1509_37498, RNA1509_42995} {RNA1310_39913, RNA1509_37498, RNA1509_42995} {RNA1509_37498, RNA1509_42995, RNA815_19368}
13.	MligTC455_30879	71	1.48	Mlig455_051449	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.777		0.956	-	-	-	-	-	0.956	Mlig455_051449 {REF} {Length: 649} {TRANSSPLICED} {RNA1509_13351} {RNA1310_56244} {RNA815_28747.1}
14.	MligTC455_39968	3050	63.55	Mlig455_038803, Mlig455_038818	Neo: - Age: -	ARMH1	0.956	-	-	-	-	-	0.956	Mlig455_038803 {REF} {Length: 1521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=307.3]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.8]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [Score=348, Expect=9e-117]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [Score=452, Expect=2e-158]} {RNA1509_47565} {RNA1310_17500.2} {RNA815_7289} Mlig455_038818 {REF} {Length: 1590} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=371.8]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.7]; HEAT repeats [PF13646.8, score=23.6]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [RH, Score=388, Expect=4e-132]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [RH, Score=405, Expect=9e-139]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_47565, RNA1509_5763} {RNA1310_17500.1, RNA1509_47565, RNA1509_5763} {RNA1509_47565, RNA1509_5763, RNA815_7289}
15.	MligTC455_50533	66	1.38	Mlig455_064328	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_064328 {REF} {Length: 838} {RNA1310_88153} {RNA815_57541}
16.	MligTC455_52974	208	4.33	Mlig455_006731	Neo: - Age: logFC(26M/2M)=-0.440		0.95	-	-	-	-	-	0.950	Mlig455_006731 {REF} {Length: 2281} {TRANSSPLICED} {Pfam: Gamma-glutamyl cyclotransferase, AIG2-like [PF06094.14, score=41.4]; AIG2-like family [PF13772.8, score=36.0]} {RNA1509_12874} {RNA1310_10210.1} {RNA815_7283}

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