Data search


search
Exact
Search

Results for MligTC455_31279

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31279 62 1.29 Mlig455_067301

Neo: -

Age: -

Mlig455_067301 {REF} {Length: 4204} {RNA1509_6961} {RNA1310_12096.1} {RNA815_17424}

Cumulative graph for MligTC455_31279

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.16 1.417 0.70346 1.00000
RegionR2 -2.57 1.417 1.00000 1.00000
RegionR3 -0.347 1.417 0.94559 1.00000
RegionR4 3.444 1.417 0.05934 0.21647
RegionR5 0.626 1.417 0.62185 0.97708
RegionR6 -0.438 1.417 0.95511 1.00000
RegionR7 -0.207 1.417 0.92469 1.00000
RegionR8 1.652 1.417 0.35896 0.99311

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.122 1.417 0.99994 1.00000
RegenerationR2 -0.819 1.417 0.56967 0.90222
RegenerationR3 -1.237 1.417 0.41259 0.81038
RegenerationR4 -1.572 1.417 0.29404 0.73748
RegenerationR5 -1.111 1.417 0.42165 0.81216
RegenerationR6 -4.635 1.417 0.01949 0.17232
RegenerationBL -0.672 1.417 0.72885 1.00000
RegenerationTP -1.012 1.417 0.55784 0.93731


Genes with expression patterns similar to MligTC455_31279

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31279 62 1.29 Mlig455_067301

Neo: -

Age: -

4 1.000 - 1.000 - 1.000 1.000 Mlig455_067301 {REF} {Length: 4204} {RNA1509_6961} {RNA1310_12096.1} {RNA815_17424}
2. MligTC455_24484 13 0.28 Mlig455_029076

Neo: -

Age: -

GIPC3 1 - - - - 1.000 - Mlig455_029076 {REF} {Length: 4488} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=118, Expect=2e-27]} {RNA1509_37183} {RNA1310_7048.1} {RNA815_45630}
3. MligTC455_47877 27 0.57 Mlig455_016941

Neo: -

Age: -

TRAF4 1 - - - - 1.000 - Mlig455_016941 {REF} {Length: 5966} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=84.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.0]; Seven in absentia protein family [PF03145.18, score=21.6]; Ring finger domain [PF13639.8, score=19.3]; zf-RING of BARD1-type protein [PF14835.8, score=19.3]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [RH, Score=240, Expect=1e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [RH, Score=244, Expect=2e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [RH, Score=172, Expect=2e-47]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=262, Expect=1e-81]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=573, Expect=0.0]} {RNA1310_10917} {RNA815_7389}
4. MligTC455_34382 312 6.5 Mlig455_036836

Neo: Irradiation

Age: Up-Up-Down

Region-specific R4: 5.749

Region-enriched R4: 4.285/0.00126

0.997 - - - - 0.997 - Mlig455_036836 {REF} {Length: 690} {RNA1509_5931} {RNA1310_36130} {RNA815_20541}
5. MligTC455_48664 60 1.26 Mlig455_026550

Neo: -

Age: -

TMEM50B 0.997 - - - - 0.997 - Mlig455_026550 {REF} {Length: 1534} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0220) [PF05255.13, score=138.4]} {Human: ENSG00000142188, TMEM50B, transmembrane protein 50B, [RH, Score=194, Expect=9e-64]; ENSG00000263160, TMEM50B, transmembrane protein 50B, [RH, Score=194, Expect=9e-64]; ENSG00000183726, TMEM50A, transmembrane protein 50A, [RH, Score=186, Expect=9e-61]} {Mouse: ENSMUSG00000022964, Tmem50b, transmembrane protein 50B, [RH, Score=192, Expect=2e-63]; ENSMUSG00000028822, Tmem50a, transmembrane protein 50A, [RH, Score=187, Expect=3e-61]} {Dmel: FBgn0035528, CG15012, [RH, Score=98.2, Expect=2e-26]} {Celegans: WBGene00022280, Y74C10AL.2, [RH, Score=135, Expect=4e-41]} {Smed: dd_Smed_v6_4466_0_1, dd_Smed_v6_4466_0_1, [RH, Score=170, Expect=4e-55]} {RNA1509_21439, RNA1509_43200} {RNA1310_29718, RNA1509_21439, RNA1509_43200} {RNA1509_21439, RNA1509_43200, RNA815_10537}
6. MligTC455_55090 12 0.26 Mlig455_002755

Neo: -

Age: -

0.997 - - - - 0.997 - Mlig455_002755 {REF} {Length: 27} {NoTransDecoderORF}
7. MligTC455_11976 18 0.37 Mlig455_030317

Neo: -

Age: -

Region-enriched R4: 3.345/0.02722

0.995 - - - - 0.995 - Mlig455_030317 {REF} {Length: 1158} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=22.0]} {RNA1509_16469} {RNA1310_21639.1}
8. MligTC455_06823 18 0.37 Mlig455_048853

Neo: Germline

Age: -

Region-enriched R4: 4.530/0.00960

0.992 - - - - 0.992 - Mlig455_048853 {REF} {Length: 804} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51934} {RNA1310_14826} {RNA815_23224}
9. MligTC455_01985 11 0.22 Mlig455_047156, Mlig455_047234

Neo: -

Age: -

ZMYM1 0.991 - - - - 0.991 -

Mlig455_047156 {REF} {Length: 1126} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=40.6]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=102, Expect=1e-25]} {RNA1509_10511} {RNA1310_43060} {RNA815_5454.2}

Mlig455_047234 {REF} {Length: 1126} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=39.7]} {Human: ENSG00000197056, ZMYM1, zinc finger MYM-type containing 1, [Score=46.6, Expect=1e-05]} {Mouse: ENSMUSG00000043872, Zmym1, zinc finger, MYM domain containing 1, [Score=47.0, Expect=8e-06]} {Smed: dd_Smed_v6_13305_1_1, dd_Smed_v6_13305_1_1, [Score=103, Expect=6e-26]} {RNA1509_10511} {RNA1310_43060} {RNA815_5454.2}
10. MligTC455_32245 7 0.14 Mlig455_025855, Mlig455_025917, Mlig455_056000

Neo: -

Age: -

0.991 - - - - 0.991 -

Mlig455_025855 {REF} {Length: 4805} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=147.1]; Endonuclease-reverse transcriptase [PF14529.8, score=51.9]; RNase H [PF00075.26, score=46.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=32.2]} {RNA1509_14842} {RNA1310_5744} {RNA815_17140}

Mlig455_025917 {REF} {Length: 4805} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=147.0]; Endonuclease-reverse transcriptase [PF14529.8, score=52.5]; RNase H [PF00075.26, score=46.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=29.6]} {RNA1509_14842} {RNA1310_5744} {RNA815_17140}

Mlig455_056000 {REF} {Length: 4745} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=147.1]; Endonuclease-reverse transcriptase [PF14529.8, score=52.0]; RNase H [PF00075.26, score=47.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=32.2]} {RNA1509_14842} {RNA1310_5744} {RNA815_17140}
11. MligTC455_21904 439 9.14 Mlig455_033919, Mlig455_044098, Mlig455_058933

Neo: Germline

Age: logFC(26M/2M)=-1.519

Region-specific R4: 5.773

Region-enriched R4: 5.207/0.00000

0.986 - - - - 0.986 -

Mlig455_033919 {REF} {Length: 2174} {RNA1509_49754} {RNA1310_50896, RNA1509_49754} {RNA1509_49754, RNA815_10763.1}

Mlig455_044098 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_17998} {RNA1310_44069} {RNA815_10763.1}

Mlig455_058933 {REF} {Length: 1346} {NoTransDecoderORF} {RNA1509_17998} {RNA1310_44069} {RNA815_10763.1}
12. MligTC455_06420 81 1.69 Mlig455_004566

Neo: -

Age: -

SLC25A38 0.983 - - - - 0.983 - Mlig455_004566 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=143.1]} {Human: ENSG00000144659, SLC25A38, solute carrier family 25 member 38, [RH, Score=130, Expect=3e-35]} {Mouse: ENSMUSG00000032519, Slc25a38, solute carrier family 25, member 38, [RH, Score=127, Expect=6e-34]} {Dmel: FBgn0028646, aralar1, [Score=100, Expect=2e-23]} {Celegans: WBGene00020422, T10F2.2, [Score=62.8, Expect=4e-11]} {Smed: dd_Smed_v6_12659_0_1, dd_Smed_v6_12659_0_1, [RH, Score=149, Expect=4e-43]} {RNA1310_18015.1} {RNA815_19336}
13. MligTC455_21906 495 10.3 Mlig455_021936, Mlig455_037810, Mlig455_057100

Neo: Germline

Age: -

Region-specific R4: 5.284

Region-enriched R4: 4.898/0.00000

0.982 - - - - 0.982 -

Mlig455_021936 {REF} {Length: 664} {NoTransDecoderORF} {RNA1509_49754} {RNA1310_50896} {RNA815_10763.1}

Mlig455_037810 {REF} {Length: 525} {NoTransDecoderORF} {RNA1509_49754} {RNA1310_50896} {RNA815_10763.1}

Mlig455_057100 {REF} {Length: 2496} {tRNA: Gly(TCC), score=66.7} {Pfam: THAP domain [PF05485.14, score=30.3]} {RNA1509_32664} {RNA1310_23016.1} {RNA815_21719}
14. MligTC455_06003 3 0.06 Mlig455_016057

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_016057 {REF} {Length: 321} {NoTransDecoderORF} {RNA1509_35107} {RNA1310_2396} {RNA815_7096.1}
15. MligTC455_14419 12 0.25 Mlig455_007516, Mlig455_042527

Neo: -

Age: -

0.979 - - - - 0.979 -

Mlig455_007516 {REF} {Length: 198} {NoTransDecoderORF} {RNA1310_85817}

Mlig455_042527 {REF} {Length: 1425} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=44.5]} {Smed: dd_Smed_v6_63969_0_1, dd_Smed_v6_63969_0_1, [Score=48.5, Expect=9e-07]} {RNA1310_48512} {RNA815_39438}
16. MligTC455_18503 17 0.36 Mlig455_007178

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_007178 {REF} {Length: 414} {NoTransDecoderORF} {RNA1310_86515}
17. MligTC455_18517 3 0.06 Mlig455_063416

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_063416 {REF} {Length: 889} {RNA1310_43255} {RNA815_56258}
18. MligTC455_10286 7 0.15 Mlig455_024243

Neo: -

Age: -

AC019117.2 0.978 - - - - 0.978 - Mlig455_024243 {REF} {Length: 1996} {Pfam: PAS fold [PF08447.14, score=61.7]; PAS domain [PF14598.8, score=54.3]; PAS fold [PF00989.27, score=43.0]; Helix-loop-helix DNA-binding domain [PF00010.28, score=28.5]; PAS domain [PF13426.9, score=21.2]} {Human: ENSG00000283321, AC019117.2, novel protein, [Score=249, Expect=3e-73]; ENSG00000106546, AHR, aryl hydrocarbon receptor, [Score=249, Expect=6e-73]} {Mouse: ENSMUSG00000019256, Ahr, aryl-hydrocarbon receptor, [Score=234, Expect=6e-68]} {Dmel: FBgn0003513, ss, spineless, [Score=317, Expect=2e-98]} {Celegans: WBGene00000096, ahr-1, Aryl hydrocarbon receptor protein 1, [Score=217, Expect=2e-63]} {Smed: dd_Smed_v6_17534_0_1, dd_Smed_v6_17534_0_1, [Score=373, Expect=3e-122]}
19. MligTC455_14942 14 0.29 Mlig455_014044

Neo: -

Age: -

Regeneration-enriched R4: 8.480
Regeneration-enriched R5: 6.277

0.978 - - - - 0.978 - Mlig455_014044 {REF} {Length: 1896} {Pfam: CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 [PF07878.13, score=19.5]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=19.0]} {RNA1509_41226} {RNA1310_13589} {RNA815_3347.1}
20. MligTC455_21337 11 0.23 Mlig455_047767

Neo: -

Age: -

0.976 - - - - 0.976 - Mlig455_047767 {REF} {Length: 4066} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
21. MligTC455_36455 8 0.16 Mlig455_038435

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_038435 {REF} {Length: 4019} {RNA1509_56529} {RNA1310_62490}
22. MligTC455_14482 82 1.7 Mlig455_040190

Neo: Germline

Age: -

Region-enriched R4: 3.783/0.00054

0.972 - - - - 0.972 - Mlig455_040190 {REF} {Length: 688} {RNA1509_52538} {RNA1310_59981.1} {RNA815_37277}
23. MligTC455_10848 46 0.96 Mlig455_042721

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_042721 {REF} {Length: 589} {TRANSSPLICED} {RNA1509_14772} {RNA1310_8010} {RNA815_3364.2}
24. MligTC455_10849 55 1.14 Mlig455_042823

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_042823 {REF} {Length: 479} {NoTransDecoderORF}
25. MligTC455_25816 6 0.13 Mlig455_006375, Mlig455_038003, Mlig455_038005

Neo: -

Age: -

NOTCH1, PIF1 0.969 - - - - 0.969 -

Mlig455_006375 {REF} {Length: 1376} {Pfam: EGF-like domain [PF00008.29, score=73.9]; Human growth factor-like EGF [PF12661.9, score=30.5]; EGF-like domain [PF07974.15, score=25.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=150, Expect=3e-38]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=153, Expect=2e-39]} {Dmel: FBgn0259685, crb, crumbs, [Score=153, Expect=8e-40]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=129, Expect=5e-32]} {RNA1509_39306} {RNA1310_29543} {RNA815_693.1}

Mlig455_038003 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2}

Mlig455_038005 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2}
26. MligTC455_13312 90 1.87 Mlig455_043799

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.446/0.00066

0.967 - - - - 0.967 - Mlig455_043799 {REF} {Length: 928} {NoTransDecoderORF} {RNA1310_52585} {RNA815_32224.1}
27. MligTC455_22359 139 2.89 Mlig455_014426

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.407

Region-specific R4: 5.065

Region-enriched R4: 3.907/0.00028

0.967 - - - - 0.967 - Mlig455_014426 {REF} {Length: 3891} {RNA1509_7805} {RNA1310_11802} {RNA815_4118.1}
28. MligTC455_55961 2 0.04 Mlig455_061814

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_061814 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_14328} {RNA815_4890}
29. MligTC455_18062 708 14.76 Mlig455_000839

Neo: Germline

Age: logFC(26M/2M)=-0.621

Region-specific R4: 5.196

Region-enriched R4: 4.161/0.00001

0.965 - - - - 0.965 - Mlig455_000839 {REF} {Length: 596} {NoTransDecoderORF} {RNA1509_5721} {RNA1310_74198} {RNA815_38196}
30. MligTC455_01791 37 0.78 Mlig455_005666

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_005666 {REF} {Length: 933} {Pfam: Cell division protein ZapB [PF06005.14, score=21.1]}
31. MligTC455_14331 9 0.18 Mlig455_036281

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_036281 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_35447} {RNA1310_64055} {RNA815_50141}
32. MligTC455_09089 10 0.21 Mlig455_061689

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_061689 {REF} {Length: 345} {NoTransDecoderORF} {RNA1310_63094.1}
33. MligTC455_33344 32 0.66 Mlig455_002534

Neo: -

Age: Up-Down-Down

0.963 - - - - 0.963 - Mlig455_002534 {REF} {Length: 4448} {RNA1509_26266} {RNA1310_121715} {RNA815_60971}
34. MligTC455_07504 85 1.77 Mlig455_001458

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_001458 {REF} {Length: 4238} {RNA1310_78279}
35. MligTC455_38645 39 0.81 Mlig455_050725

Neo: -

Age: Up-Down-Down

ANK2 0.96 - - - - 0.960 - Mlig455_050725 {REF} {Length: 4388} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=233.5]; Ankyrin repeats (many copies) [PF13637.8, score=166.2]; Ankyrin repeat [PF00023.32, score=152.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.1]; Ankyrin repeat [PF13606.8, score=119.1]; Caspase domain [PF00656.24, score=111.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=153, Expect=7e-37]; ENSG00000151150, ANK3, ankyrin 3, [Score=147, Expect=5e-35]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=149, Expect=6e-36]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=147, Expect=3e-35]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=162, Expect=5e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=142, Expect=9e-34]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=153, Expect=1e-37]} {RNA1310_35016} {RNA815_47821}
36. MligTC455_49737 9 0.18 Mlig455_045303

Neo: -

Age: -

NAA35 0.957 - - - - 0.957 - Mlig455_045303 {REF} {Length: 3104} {TRANSSPLICED} {Pfam: Mak10 subunit, NatC N(alpha)-terminal acetyltransferase [PF04112.15, score=52.6]} {Human: ENSG00000135040, NAA35, N(alpha)-acetyltransferase 35, NatC auxiliary subunit, [RH, Score=223, Expect=4e-62]} {Mouse: ENSMUSG00000021555, Naa35, N(alpha)-acetyltransferase 35, NatC auxiliary subunit, [RH, Score=220, Expect=2e-61]} {Dmel: FBgn0034982, Naa35, N(alpha)-acetyltransferase 35, [RH, Score=194, Expect=7e-52]} {Celegans: WBGene00020719, natc-1, N-alpha-AcetylTransferase C complex subunit, [RH, Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_7606_0_1, dd_Smed_v6_7606_0_1, [RH, Score=246, Expect=1e-70]} {RNA1509_10746} {RNA1310_3968} {RNA815_6081}
37. MligTC455_02765 23 0.48 Mlig455_046340

Neo: Germline

Age: Up-Down-Up

0.956 - - - - 0.956 - Mlig455_046340 {REF} {Length: 2025} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=21.5]} {Smed: dd_Smed_v6_649_0_1, dd_Smed_v6_649_0_1, [RH, Score=50.1, Expect=5e-08]} {RNA1509_1808} {RNA1310_30917} {RNA815_59436}
38. MligTC455_46309 9 0.18 Mlig455_061727

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_061727 {REF} {Length: 1792} {Pfam: Glycine rich protein [PF12810.9, score=22.8]} {RNA1310_134737} {RNA815_57224}
39. MligTC455_41886 216 4.51 Mlig455_004189

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.687

Region-enriched R4: 4.532/0.00001

0.953 - - - - 0.953 - Mlig455_004189 {REF} {Length: 2965} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=75.9, Expect=4e-15]} {RNA1509_16009, RNA1509_43368} {RNA1310_21432, RNA1509_43368} {RNA1509_43368, RNA815_11018}
40. MligTC455_19383 82 1.71 Mlig455_032414

Neo: Germline

Age: -

Region-enriched R4: 3.681/0.00002

GABBR2 0.952 - - - - 0.952 - Mlig455_032414 {REF} {Length: 3517} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=167.6]; Receptor family ligand binding region [PF01094.30, score=72.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=303, Expect=3e-88]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=303, Expect=1e-88]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=338, Expect=1e-99]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=298, Expect=2e-87]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=9e-45]} {RNA1509_48457} {RNA1310_18461} {RNA815_14519}
41. MligTC455_29114 9 0.19 Mlig455_027989, Mlig455_056214

Neo: -

Age: -

0.95 - - - - 0.950 -

Mlig455_027989 {REF} {Length: 2350} {RNA1509_45908} {RNA1310_5039}

Mlig455_056214 {REF} {Length: 4160} {Pfam: EGF-like domain [PF07974.15, score=25.7]; Tenascin EGF domain [PF18720.3, score=18.7]} {RNA1509_45908} {RNA1310_5039}
42. MligTC455_38807 27 0.56 Mlig455_040236, Mlig455_050654, Mlig455_058203

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.714

0.95 - - - - 0.950 -

Mlig455_040236 {REF} {Length: 443} {Pfam: Integrase zinc binding domain [PF17921.3, score=30.4]} {RNA1509_37828} {RNA1310_2927} {RNA815_3168.1}

Mlig455_050654 {REF} {Length: 4214} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=83.8]; Integrase zinc binding domain [PF17921.3, score=64.9]; Integrase core domain [PF00665.28, score=46.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=116, Expect=4e-27]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_058203 {REF} {Length: 1011} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=87.3]; Integrase zinc binding domain [PF17921.3, score=66.0]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=118, Expect=2e-30]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA