Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_14331 | 9 | 0.18 | Mlig455_036281 | Neo: - Age: - |
Mlig455_036281 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_35447} {RNA1310_64055} {RNA815_50141} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_14331 | 9 | 0.18 | Mlig455_036281 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_036281 {REF} {Length: 831} {NoTransDecoderORF} {RNA1509_35447} {RNA1310_64055} {RNA815_50141} | |
2. | MligTC455_06420 | 81 | 1.69 | Mlig455_004566 | Neo: - Age: - |
SLC25A38 | 0.995 | - | - | - | - | 0.995 | - | Mlig455_004566 {REF} {Length: 2175} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=143.1]} {Human: ENSG00000144659, SLC25A38, solute carrier family 25 member 38, [RH, Score=130, Expect=3e-35]} {Mouse: ENSMUSG00000032519, Slc25a38, solute carrier family 25, member 38, [RH, Score=127, Expect=6e-34]} {Dmel: FBgn0028646, aralar1, [Score=100, Expect=2e-23]} {Celegans: WBGene00020422, T10F2.2, [Score=62.8, Expect=4e-11]} {Smed: dd_Smed_v6_12659_0_1, dd_Smed_v6_12659_0_1, [RH, Score=149, Expect=4e-43]} {RNA1310_18015.1} {RNA815_19336} |
3. | MligTC455_36455 | 8 | 0.16 | Mlig455_038435 | Neo: - Age: - |
0.985 | - | - | - | - | 0.985 | - | Mlig455_038435 {REF} {Length: 4019} {RNA1509_56529} {RNA1310_62490} | |
4. | MligTC455_06823 | 18 | 0.37 | Mlig455_048853 | Neo: Germline Age: - Region-enriched R4: 4.530/0.00960 |
0.982 | - | - | - | - | 0.982 | - | Mlig455_048853 {REF} {Length: 804} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51934} {RNA1310_14826} {RNA815_23224} | |
5. | MligTC455_07504 | 85 | 1.77 | Mlig455_001458 | Neo: - Age: - |
0.98 | - | - | - | - | 0.980 | - | Mlig455_001458 {REF} {Length: 4238} {RNA1310_78279} | |
6. | MligTC455_33344 | 32 | 0.66 | Mlig455_002534 | Neo: - Age: Up-Down-Down |
0.98 | - | - | - | - | 0.980 | - | Mlig455_002534 {REF} {Length: 4448} {RNA1509_26266} {RNA1310_121715} {RNA815_60971} | |
7. | MligTC455_09332 | 17 | 0.35 | Mlig455_054514, Mlig455_055433 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_054514 {REF} {Length: 101} {NoTransDecoderORF} Mlig455_055433 {REF} {Length: 225} {NoTransDecoderORF} |
|
8. | MligTC455_55090 | 12 | 0.26 | Mlig455_002755 | Neo: - Age: - |
0.976 | - | - | - | - | 0.976 | - | Mlig455_002755 {REF} {Length: 27} {NoTransDecoderORF} | |
9. | MligTC455_30737 | 10 | 0.22 | Mlig455_059743 | Neo: - Age: - |
NYNRIN | 0.973 | - | - | - | - | 0.973 | - | Mlig455_059743 {REF} {Length: 4760} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=116.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=114.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=81.4]; Integrase zinc binding domain [PF17921.3, score=74.8]; Integrase core domain [PF00665.28, score=54.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.1, Expect=3e-19]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=104, Expect=3e-22]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=392, Expect=2e-121]} {RNA1509_52755} {RNA1310_2440.1} {RNA815_21486} |
10. | MligTC455_48159 | 100 | 2.07 | Mlig455_057372, Mlig455_057396, Mlig455_059563 | Neo: - Age: Down-Up-Up |
0.971 | - | - | - | - | 0.971 | - | Mlig455_057372 {REF} {Length: 1060} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=25.8]} {RNA1310_31078} {RNA815_45415} Mlig455_057396 {REF} {Length: 1126} {RNA1310_31078} {RNA815_45415} Mlig455_059563 {REF} {Length: 920} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=29.7]} {RNA1310_31078} {RNA815_45415} |
|
11. | MligTC455_33519 | 77 | 1.61 | Mlig455_035174 | Neo: - Age: - |
RHBDL3 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_035174 {REF} {Length: 3074} {Pfam: Rhomboid family [PF01694.24, score=117.4]; EF-hand domain pair [PF13499.8, score=24.1]; EF-hand domain pair [PF13833.8, score=21.9]; EF hand [PF13202.8, score=20.3]; EF hand [PF00036.34, score=20.1]} {Human: ENSG00000141314, RHBDL3, rhomboid like 3, [Score=171, Expect=1e-48]; ENSG00000158315, RHBDL2, rhomboid like 2, [Score=171, Expect=2e-49]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=188, Expect=4e-56]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=177, Expect=4e-50]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=145, Expect=1e-39]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [RH, Score=332, Expect=5e-111]} {RNA1310_72334} {RNA815_32924} |
12. | MligTC455_21337 | 11 | 0.23 | Mlig455_047767 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_047767 {REF} {Length: 4066} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2} | |
13. | MligTC455_10740 | 15 | 0.32 | Mlig455_061543 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_061543 {REF} {Length: 3618} {Pfam: Starch binding domain [PF00686.21, score=30.6]} {RNA1509_32396} {RNA1310_55992} {RNA815_16867} | |
14. | MligTC455_10848 | 46 | 0.96 | Mlig455_042721 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_042721 {REF} {Length: 589} {TRANSSPLICED} {RNA1509_14772} {RNA1310_8010} {RNA815_3364.2} | |
15. | MligTC455_10849 | 55 | 1.14 | Mlig455_042823 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_042823 {REF} {Length: 479} {NoTransDecoderORF} | |
16. | MligTC455_31279 | 62 | 1.29 | Mlig455_067301 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_067301 {REF} {Length: 4204} {RNA1509_6961} {RNA1310_12096.1} {RNA815_17424} | |
17. | MligTC455_01791 | 37 | 0.78 | Mlig455_005666 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_005666 {REF} {Length: 933} {Pfam: Cell division protein ZapB [PF06005.14, score=21.1]} | |
18. | MligTC455_47877 | 27 | 0.57 | Mlig455_016941 | Neo: - Age: - |
TRAF4 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_016941 {REF} {Length: 5966} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=84.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=22.0]; Seven in absentia protein family [PF03145.18, score=21.6]; Ring finger domain [PF13639.8, score=19.3]; zf-RING of BARD1-type protein [PF14835.8, score=19.3]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [RH, Score=240, Expect=1e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [RH, Score=244, Expect=2e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [RH, Score=172, Expect=2e-47]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=262, Expect=1e-81]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=573, Expect=0.0]} {RNA1310_10917} {RNA815_7389} |
19. | MligTC455_23180 | 59 | 1.22 | Mlig455_018797 | Neo: - Age: - |
RPS18 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_018797 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Ribosomal protein S13/S18 [PF00416.24, score=155.0]} {Human: ENSG00000231500, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000235650, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000096150, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000226225, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]; ENSG00000223367, RPS18, ribosomal protein S18, [RH, Score=215, Expect=2e-72]} {Mouse: ENSMUSG00000008668, Rps18, ribosomal protein S18, [RH, Score=215, Expect=1e-72]; ENSMUSG00000113061, Gm11361, predicted pseudogene 11361, [RH, Score=213, Expect=1e-71]; ENSMUSG00000069117, Gm10260, predicted gene 10260, [RH, Score=211, Expect=5e-71]} {Dmel: FBgn0010411, RpS18, Ribosomal protein S18, [RH, Score=213, Expect=5e-72]} {Celegans: WBGene00004487, rps-18, Ribosomal Protein, Small subunit, [RH, Score=201, Expect=4e-67]} {Smed: dd_Smed_v6_99_0_1, dd_Smed_v6_99_0_1, [RH, Score=202, Expect=1e-67]} {RNA1509_19061} {RNA1310_59111.1} {RNA815_18233.1} |
20. | MligTC455_24484 | 13 | 0.28 | Mlig455_029076 | Neo: - Age: - |
GIPC3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_029076 {REF} {Length: 4488} {Human: ENSG00000179855, GIPC3, GIPC PDZ domain containing family member 3, [Score=57.0, Expect=1e-07]} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=118, Expect=2e-27]} {RNA1509_37183} {RNA1310_7048.1} {RNA815_45630} |
21. | MligTC455_23400 | 7 | 0.16 | Mlig455_026159 | Neo: - Age: - |
AVPR1B | 0.955 | - | - | - | - | 0.955 | - | Mlig455_026159 {REF} {Length: 3115} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=105.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.5]} {Human: ENSG00000198049, AVPR1B, arginine vasopressin receptor 1B, [Score=114, Expect=8e-27]; ENSG00000187258, NPSR1, neuropeptide S receptor 1, [Score=110, Expect=2e-25]} {Mouse: ENSMUSG00000043659, Npsr1, neuropeptide S receptor 1, [Score=110, Expect=1e-25]; ENSMUSG00000020123, Avpr1a, arginine vasopressin receptor 1A, [Score=107, Expect=2e-24]} {Dmel: FBgn0039396, CCAP-R, Crustacean cardioactive peptide receptor, [Score=118, Expect=7e-28]} {Celegans: WBGene00015646, mlt-10, [Score=171, Expect=5e-45]} {Smed: dd_Smed_v6_35162_0_1, dd_Smed_v6_35162_0_1, [Score=110, Expect=4e-26]} {RNA1509_52929} {RNA1310_25125} {RNA815_32669} |
22. | MligTC455_38645 | 39 | 0.81 | Mlig455_050725 | Neo: - Age: Up-Down-Down |
ANK2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_050725 {REF} {Length: 4388} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=233.5]; Ankyrin repeats (many copies) [PF13637.8, score=166.2]; Ankyrin repeat [PF00023.32, score=152.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.1]; Ankyrin repeat [PF13606.8, score=119.1]; Caspase domain [PF00656.24, score=111.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=153, Expect=7e-37]; ENSG00000151150, ANK3, ankyrin 3, [Score=147, Expect=5e-35]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=149, Expect=6e-36]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=147, Expect=3e-35]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=162, Expect=5e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=142, Expect=9e-34]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=153, Expect=1e-37]} {RNA1310_35016} {RNA815_47821} |
23. | MligTC455_34382 | 312 | 6.5 | Mlig455_036836 | Neo: Irradiation Age: Up-Up-Down Region-specific R4: 5.749 Region-enriched R4: 4.285/0.00126 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_036836 {REF} {Length: 690} {RNA1509_5931} {RNA1310_36130} {RNA815_20541} | |
24. | MligTC455_39204 | 17 | 0.36 | Mlig455_020742 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_020742 {REF} {Length: 702} {RNA1509_42238} {RNA1310_16552} {RNA815_33632} | |
25. | MligTC455_39205 | 14 | 0.28 | Mlig455_020814 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_020814 {REF} {Length: 640} {RNA1509_42238} {RNA1310_15237.1} {RNA815_33632} | |
26. | MligTC455_14942 | 14 | 0.29 | Mlig455_014044 | Neo: - Age: - Regeneration-enriched R4: 8.480 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_014044 {REF} {Length: 1896} {Pfam: CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 [PF07878.13, score=19.5]; Phage integrase, N-terminal SAM-like domain [PF02899.19, score=19.0]} {RNA1509_41226} {RNA1310_13589} {RNA815_3347.1} | |
27. | MligTC455_25816 | 6 | 0.13 | Mlig455_006375, Mlig455_038003, Mlig455_038005 | Neo: - Age: - |
NOTCH1, PIF1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_006375 {REF} {Length: 1376} {Pfam: EGF-like domain [PF00008.29, score=73.9]; Human growth factor-like EGF [PF12661.9, score=30.5]; EGF-like domain [PF07974.15, score=25.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=150, Expect=3e-38]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=153, Expect=2e-39]} {Dmel: FBgn0259685, crb, crumbs, [Score=153, Expect=8e-40]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=129, Expect=5e-32]} {RNA1509_39306} {RNA1310_29543} {RNA815_693.1} Mlig455_038003 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2} Mlig455_038005 {REF} {Length: 5339} {Pfam: PIF1-like helicase [PF05970.16, score=324.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]; AAA domain [PF13604.8, score=57.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=115, Expect=9e-26]} {Celegans: WBGene00018020, F33H12.6, [RH, Score=746, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=104, Expect=1e-22]} {RNA1310_14584.2} |