TomoSeq data search

Data search

Results for MligTC455_31309

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31309

1612

33.58

Mlig455_016142, Mlig455_016149, Mlig455_016150, Mlig455_034545, Mlig455_059085, Mlig455_061905

Neo: -

Age: Down-Down-Down

Mlig455_016142 {REF} {Length: 833} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_016149 {REF} {Length: 831} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_016150 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_034545 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_059085 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Mlig455_061905 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}

Cumulative graph for MligTC455_31309

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.788	5.428	0.01064	0.30104
RegionR2	1.328	5.428	0.08909	0.36594
RegionR3	-0.042	5.428	0.94216	1.00000
RegionR4	-0.705	5.428	0.33216	0.65031
RegionR5	0.448	5.428	0.42685	0.78679
RegionR6	0.855	5.428	0.15013	0.69067
RegionR7	1.028	5.428	0.07382	0.52419
RegionR8	0.876	5.428	0.19247	0.78526

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.582	5.428	0.56128	1.00000
RegenerationR2	-0.315	5.428	0.67577	0.94748
RegenerationR3	-0.409	5.428	0.62178	0.91737
RegenerationR4	-0.037	5.428	0.96385	1.00000
RegenerationR5	-0.236	5.428	0.76826	0.97850
RegenerationR6	-1.092	5.428	0.16122	0.49004
RegenerationBL	-0.678	5.428	0.40814	0.77722
RegenerationTP	-2.532	5.428	0.00686	0.13953

Genes with expression patterns similar to MligTC455_31309

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31309	1612	33.58	Mlig455_016142, Mlig455_016149, Mlig455_016150, Mlig455_034545, Mlig455_059085, Mlig455_061905	Neo: - Age: Down-Down-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016142 {REF} {Length: 833} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_016149 {REF} {Length: 831} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_016150 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_034545 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_059085 {REF} {Length: 830} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_061905 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139}
2.	MligTC455_31308	3230	67.28	Mlig455_000724, Mlig455_000725, Mlig455_012146, Mlig455_012148, Mlig455_016997, Mlig455_016998, Mlig455_031917, Mlig455_033315, Mlig455_033316, Mlig455_050631, Mlig455_061904, Mlig455_070557	Neo: - Age: logFC(26M/2M)=-1.904		5.892	0.999	0.994	0.983	0.981	0.944	0.991	Mlig455_000724 {REF} {Length: 827} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895, RNA1509_9941} {RNA1310_31663.1, RNA1509_9895, RNA1509_9941} {RNA1509_9895, RNA1509_9941, RNA815_17139} Mlig455_000725 {REF} {Length: 848} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9941} {RNA1310_30928} {RNA815_17139} Mlig455_012146 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} Mlig455_012148 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} Mlig455_016997 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} Mlig455_016998 {REF} {Length: 841} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} Mlig455_031917 {REF} {Length: 842} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_30928} {RNA815_17139} Mlig455_033315 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_033316 {REF} {Length: 813} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_050631 {REF} {Length: 848} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25759, RNA1509_9941} {RNA1310_30928, RNA1509_25759} {RNA1509_25759, RNA815_17139} Mlig455_061904 {REF} {Length: 803} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9895} {RNA1310_38071} {RNA815_17139} Mlig455_070557 {REF} {Length: 466} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_9941} {RNA1310_38071} {RNA815_17139}
3.	MligTC455_30444	349	7.28	Mlig455_008721	Neo: - Age: -	ITPKC	1.753	-	-	-	-	0.956	0.797	Mlig455_008721 {REF} {Length: 3855} {TRANSSPLICED} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=109.3]} {Human: ENSG00000086544, ITPKC, inositol-trisphosphate 3-kinase C, [RH, Score=276, Expect=7e-87]} {Mouse: ENSMUSG00000003752, Itpkc, inositol 1,4,5-trisphosphate 3-kinase C, [RH, Score=281, Expect=6e-89]} {Dmel: FBgn0283680, IP3K2, Inositol 1,4,5-triphosphate kinase 2, [Score=251, Expect=1e-79]} {Celegans: WBGene00002979, lfe-2, Inositol-trisphosphate 3-kinase homolog, [Score=200, Expect=6e-61]} {Smed: dd_Smed_v6_3687_0_1, dd_Smed_v6_3687_0_1, [RH, Score=242, Expect=4e-75]} {RNA1509_34871} {RNA1310_22346.1} {RNA815_11408}
4.	MligTC455_47797	540	11.25	Mlig455_026443, Mlig455_026475	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.381	TMEM222	1.73	-	-	-	0.770	0.960	-	Mlig455_026443 {REF} {Length: 6387} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=78.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.0]; Ring finger domain [PF13639.8, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=129, Expect=3e-34]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=124, Expect=2e-32]} {Dmel: FBgn0032000, CG8372, [Score=118, Expect=8e-31]} {Celegans: WBGene00019221, H20J04.6, [Score=124, Expect=5e-33]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=134, Expect=8e-37]} {RNA1509_32293} {RNA1310_12215.2} {RNA815_8332} Mlig455_026475 {REF} {Length: 2505} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.9]; Ring finger domain [PF13639.8, score=23.2]} {RNA1509_32293} {RNA1310_12215.2, RNA1509_32293} {RNA1509_32293, RNA815_8332}
5.	MligTC455_52559	318	6.62	Mlig455_022223	Neo: - Age: -	CYP2J2	1.692	-	-	-	-	0.958	0.734	Mlig455_022223 {REF} {Length: 2842} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=315.3]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=252, Expect=3e-77]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=244, Expect=2e-74]} {Mouse: ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=253, Expect=8e-78]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=251, Expect=5e-77]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=249, Expect=2e-76]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=249, Expect=2e-76]} {Dmel: FBgn0036910, Cyp305a1, [RH, Score=211, Expect=7e-62]} {Celegans: WBGene00015135, cyp-23A1, CYtochrome P450 family, [Score=228, Expect=6e-68]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=258, Expect=6e-80]} {RNA1509_9953} {RNA1310_15754, RNA1509_9953} {RNA1509_9953, RNA815_7239}
6.	MligTC455_49511	324	6.76	Mlig455_001161	Neo: - Age: Down-Up-Down		0.963	-	-	-	-	0.963	-	Mlig455_001161 {REF} {Length: 2299} {TRANSSPLICED} {RNA1509_17368, RNA1509_8645} {RNA1310_12470, RNA1509_17368, RNA1509_8645} {RNA1509_17368, RNA1509_8645, RNA815_9297.1}
7.	MligTC455_52111	120	2.5	Mlig455_036893	Neo: - Age: - Region-enriched R5: 2.209/0.02779		0.959	-	-	-	0.959	-	-	Mlig455_036893 {REF} {Length: 1778} {RNA1310_41662.1} {RNA815_33206}
8.	MligTC455_14648	394	8.21	Mlig455_006859	Neo: - Age: logFC(26M/2M)=0.300	CLPB	0.956	-	-	-	-	-	0.956	Mlig455_006859 {REF} {Length: 4077} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=137.2]; Ankyrin repeat [PF00023.32, score=52.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=48.3]; Ankyrin repeats (3 copies) [PF12796.9, score=45.3]; Ankyrin repeat [PF13606.8, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=35.3]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=31.8]; Ankyrin repeats (many copies) [PF13857.8, score=30.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.8]; AAA domain [PF13401.8, score=26.5]; AAA ATPase domain [PF13191.8, score=23.4]; Sigma-54 interaction domain [PF00158.28, score=20.6]} {Human: ENSG00000162129, CLPB, ClpB homolog, mitochondrial AAA ATPase chaperonin, [RH, Score=522, Expect=1e-177]} {Mouse: ENSMUSG00000001829, Clpb, ClpB caseinolytic peptidase B, [RH, Score=525, Expect=4e-179]} {Dmel: FBgn0039075, CG4393, [Score=53.9, Expect=5e-07]} {Smed: dd_Smed_v6_7341_0_1, dd_Smed_v6_7341_0_1, [RH, Score=508, Expect=4e-174]} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1310_12205.1, RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365, RNA815_4340}
9.	MligTC455_19316	221	4.6	Mlig455_050415	Neo: Irradiation Age: -	ZNF626	0.956	-	-	-	-	0.956	-	Mlig455_050415 {REF} {Length: 3403} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=68.5]; Zinc-finger double domain [PF13465.8, score=68.0]; C2H2-type zinc finger [PF13894.8, score=56.1]; C2H2-type zinc finger [PF13912.8, score=36.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=26.1]; Zinc ribbon domain [PF09723.12, score=25.6]; Transposase zinc-ribbon domain [PF12760.9, score=22.3]; Zic proteins zinc finger domain [PF18366.3, score=19.2]} {Human: ENSG00000188171, ZNF626, zinc finger protein 626, [Score=122, Expect=9e-30]} {Mouse: ENSMUSG00000092416, Zfp141, zinc finger protein 141, [Score=112, Expect=4e-26]; ENSMUSG00000074863, Platr25, pluripotency associated transcript 25, [Score=110, Expect=8e-26]; ENSMUSG00000054715, Zscan22, zinc finger and SCAN domain containing 22, [Score=110, Expect=9e-26]; ENSMUSG00000091183, Gm5141, predicted gene 5141, [Score=108, Expect=5e-25]; ENSMUSG00000069476, Zfp616, zinc finger protein 616, [Score=108, Expect=1e-24]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=107, Expect=1e-24]; ENSMUSG00000030757, Zkscan2, zinc finger with KRAB and SCAN domains 2, [Score=107, Expect=3e-24]; ENSMUSG00000045639, Zfp629, zinc finger protein 629, [Score=107, Expect=3e-24]} {Dmel: FBgn0004618, gl, glass, [Score=112, Expect=2e-26]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=97.8, Expect=2e-23]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=99.4, Expect=5e-23]} {RNA1509_16295, RNA1509_53463} {RNA1310_10064, RNA1509_16295, RNA1509_53463} {RNA1509_16295, RNA1509_53463, RNA815_10615}
10.	MligTC455_23583	89	1.85	Mlig455_043283	Neo: - Age: logFC(26M/2M)=2.025	CCDC33	0.954	-	-	-	-	0.954	-	Mlig455_043283 {REF} {Length: 3465} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=24.1]; C-terminal membrane-localisation domain of ion-channel, VCN1 [PF16799.7, score=19.4]} {Human: ENSG00000140481, CCDC33, coiled-coil domain containing 33, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000037716, Ccdc33, coiled-coil domain containing 33, [RH, Score=163, Expect=1e-40]} {Smed: dd_Smed_v6_15844_0_1, dd_Smed_v6_15844_0_1, [RH, Score=198, Expect=3e-52]} {RNA1509_7141} {RNA1310_3740} {RNA815_780.1}
11.	MligTC455_51346	1159	24.15	Mlig455_069672	Neo: - Age: Up-Down-Up	PRDX5	0.953	-	-	-	-	-	0.953	Mlig455_069672 {REF} {Length: 1869} {TRANSSPLICED} {Pfam: Redoxin [PF08534.12, score=108.5]; AhpC/TSA family [PF00578.23, score=44.1]} {Human: ENSG00000126432, PRDX5, peroxiredoxin 5, [Score=132, Expect=8e-39]} {Mouse: ENSMUSG00000024953, Prdx5, peroxiredoxin 5, [Score=123, Expect=2e-35]} {Dmel: FBgn0038570, Prx5, Peroxiredoxin 5, [Score=139, Expect=4e-42]} {Smed: dd_Smed_v6_1290_0_1, dd_Smed_v6_1290_0_1, [Score=157, Expect=2e-49]} {RNA1509_41717, RNA1509_58546} {RNA1310_37609, RNA1509_41717, RNA1509_58546} {RNA1509_41717, RNA1509_58546, RNA815_25605}
12.	MligTC455_04529	474	9.87	Mlig455_019609	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.277	YIPF1	0.951	-	-	-	-	-	0.951	Mlig455_019609 {REF} {Length: 1587} {TRANSSPLICED} {Pfam: Yip1 domain [PF04893.19, score=48.9]} {Human: ENSG00000058799, YIPF1, Yip1 domain family member 1, [RH, Score=206, Expect=3e-64]} {Mouse: ENSMUSG00000057375, Yipf1, Yip1 domain family, member 1, [RH, Score=205, Expect=5e-64]} {Dmel: FBgn0030435, CG4645, [RH, Score=170, Expect=5e-50]} {Celegans: WBGene00021294, Y25C1A.7, [RH, Score=199, Expect=8e-61]} {Smed: dd_Smed_v6_3454_0_1, dd_Smed_v6_3454_0_1, [RH, Score=229, Expect=4e-74]} {RNA1509_28233, RNA1509_48947} {RNA1310_20421.1, RNA1509_28233} {RNA1509_28233, RNA815_8027.1}

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