Data search
Results for MligTC455_31397
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31397 | 3443 | 71.74 | Mlig455_015314 | Neo: - Age: logFC(26M/2M)=1.868 Region-enriched R4: 1.109/0.00012 |
UQCRC1 | Mlig455_015314 {REF} {Length: 2042} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=149.3]; Peptidase M16 inactive domain [PF05193.23, score=81.2]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=436, Expect=1e-149]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=426, Expect=3e-145]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=445, Expect=2e-153]} {Celegans: WBGene00018963, ucr-1, Cytochrome b-c1 complex subunit 1, mitochondrial, [RH, Score=304, Expect=2e-98]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [RH, Score=363, Expect=8e-122]} {RNA1509_1290} {RNA1310_14001.1} {RNA815_4919} |
Cumulative graph for MligTC455_31397
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.212 | 6.252 | 0.71615 | 1.00000 | |
| RegionR2 | -0.151 | 6.252 | 0.57880 | 0.93567 | |
| RegionR3 | 0.442 | 6.252 | 0.04163 | 0.35599 | |
| RegionR4 | 1.109 | 6.252 | 0.00000 | 0.00012 | |
| RegionR5 | 0.693 | 6.252 | 0.00055 | 0.00640 | |
| RegionR6 | 0.189 | 6.252 | 0.40398 | 0.97445 | |
| RegionR7 | -0.247 | 6.252 | 0.40658 | 1.00000 | |
| RegionR8 | -1.822 | 6.252 | 0.00023 | 0.01547 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.227 | 6.252 | 0.74803 | 1.00000 | |
| RegenerationR2 | -0.092 | 6.252 | 0.68199 | 0.94953 | |
| RegenerationR3 | -0.143 | 6.252 | 0.53500 | 0.87445 | |
| RegenerationR4 | -0.013 | 6.252 | 0.95345 | 1.00000 | |
| RegenerationR5 | 0.175 | 6.252 | 0.42086 | 0.81180 | |
| RegenerationR6 | 0.388 | 6.252 | 0.10378 | 0.39914 | |
| RegenerationBL | 1.036 | 6.252 | 0.00035 | 0.01106 | |
| RegenerationTP | 0.504 | 6.252 | 0.18805 | 0.62583 |
Genes with expression patterns similar to MligTC455_31397
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31397 | 3443 | 71.74 | Mlig455_015314 | Neo: - Age: logFC(26M/2M)=1.868 Region-enriched R4: 1.109/0.00012 |
UQCRC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015314 {REF} {Length: 2042} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=149.3]; Peptidase M16 inactive domain [PF05193.23, score=81.2]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=436, Expect=1e-149]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=426, Expect=3e-145]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=445, Expect=2e-153]} {Celegans: WBGene00018963, ucr-1, Cytochrome b-c1 complex subunit 1, mitochondrial, [RH, Score=304, Expect=2e-98]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [RH, Score=363, Expect=8e-122]} {RNA1509_1290} {RNA1310_14001.1} {RNA815_4919} |
| 2. | MligTC455_31398 | 3420 | 71.25 | Mlig455_032995 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.361 Region-enriched R4: 1.126/0.00012 |
UQCRC1 | 5.996 | 1.000 | 0.999 | 1.000 | 0.999 | 0.998 | 1.000 | Mlig455_032995 {REF} {Length: 1933} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=91.7]; Peptidase M16 inactive domain [PF05193.23, score=77.2]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=369, Expect=1e-123]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=357, Expect=5e-119]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [Score=357, Expect=3e-119]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [Score=357, Expect=3e-119]; ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [Score=356, Expect=8e-119]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=380, Expect=1e-128]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [Score=242, Expect=3e-75]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [Score=302, Expect=3e-98]} {RNA1509_1290} {RNA1310_14001.1} {RNA815_4919} |
| 3. | MligTC455_52063 | 6019 | 125.4 | Mlig455_032054 | Neo: - Age: - |
ACADL | 2.489 | 0.729 | - | - | - | 0.951 | 0.809 | Mlig455_032054 {REF} {Length: 1332} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=141.8]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=96.9]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=35.3]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=34.1]} {Human: ENSG00000115361, ACADL, acyl-CoA dehydrogenase long chain, [RH, Score=453, Expect=2e-159]} {Mouse: ENSMUSG00000026003, Acadl, acyl-Coenzyme A dehydrogenase, long-chain, [RH, Score=464, Expect=5e-164]} {Dmel: FBgn0035911, CG6638, [Score=202, Expect=1e-61]} {Celegans: WBGene00015326, ivd-1, IsoValeryl-CoA Dehydrogenase; Isovaleryl-CoA dehydrogenase, [Score=185, Expect=3e-55]} {Smed: dd_Smed_v6_1458_0_1, dd_Smed_v6_1458_0_1, [RH, Score=453, Expect=3e-160]} {RNA1509_14692, RNA1509_2127, RNA1509_7488} {RNA1310_3696.1, RNA1509_14692, RNA1509_2127, RNA1509_7488} {RNA1509_14692, RNA1509_2127, RNA1509_7488, RNA815_4974.1} |
| 4. | MligTC455_17956 | 4052 | 84.43 | Mlig455_033669, Mlig455_050146 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.218 Region-enriched R3: 1.577/0.00014 |
AKR1B10 | 1.729 | - | - | - | 0.769 | 0.960 | - | Mlig455_033669 {REF} {Length: 1299} {TRANSSPLICED} {Pfam: Aldo/keto reductase family [PF00248.23, score=179.4]} {Human: ENSG00000198074, AKR1B10, aldo-keto reductase family 1 member B10, [RH, Score=328, Expect=3e-112]; ENSG00000085662, AKR1B1, aldo-keto reductase family 1 member B, [RH, Score=328, Expect=6e-112]} {Mouse: ENSMUSG00000001642, Akr1b3, aldo-keto reductase family 1, member B3 (aldose reductase), [RH, Score=319, Expect=1e-108]; ENSMUSG00000028692, Akr1a1, aldo-keto reductase family 1, member A1 (aldehyde reductase), [RH, Score=306, Expect=1e-103]; ENSMUSG00000029762, Akr1b8, aldo-keto reductase family 1, member B8, [RH, Score=305, Expect=6e-103]} {Dmel: FBgn0086254, CG6084, [RH, Score=326, Expect=2e-111]} {Celegans: WBGene00012722, Y39G8B.1, [RH, Score=288, Expect=6e-97]} {Smed: dd_Smed_v6_9852_0_1, dd_Smed_v6_9852_0_1, [RH, Score=266, Expect=4e-88]} {RNA1509_6104} {RNA1310_15424} {RNA815_8072} Mlig455_050146 {REF} {Length: 2314} {Pfam: Aldo/keto reductase family [PF00248.23, score=180.6]} {Human: ENSG00000198074, AKR1B10, aldo-keto reductase family 1 member B10, [RH, Score=329, Expect=2e-112]; ENSG00000085662, AKR1B1, aldo-keto reductase family 1 member B, [RH, Score=328, Expect=4e-112]} {Mouse: ENSMUSG00000001642, Akr1b3, aldo-keto reductase family 1, member B3 (aldose reductase), [RH, Score=319, Expect=1e-108]; ENSMUSG00000028692, Akr1a1, aldo-keto reductase family 1, member A1 (aldehyde reductase), [RH, Score=307, Expect=8e-104]; ENSMUSG00000029762, Akr1b8, aldo-keto reductase family 1, member B8, [RH, Score=305, Expect=3e-103]} {Dmel: FBgn0086254, CG6084, [RH, Score=326, Expect=1e-111]} {Celegans: WBGene00012722, Y39G8B.1, [RH, Score=289, Expect=4e-97]} {Smed: dd_Smed_v6_9852_0_1, dd_Smed_v6_9852_0_1, [RH, Score=266, Expect=3e-88]} {RNA1509_18580, RNA1509_20473, RNA1509_26383, RNA1509_6104} {RNA1310_15424, RNA1509_18580, RNA1509_20473, RNA1509_26383, RNA1509_6104} {RNA1509_18580, RNA1509_20473, RNA1509_26383, RNA1509_6104, RNA815_8072} |
| 5. | MligTC455_52721 | 546 | 11.37 | Mlig455_043346 | Neo: Int S/G2/M Age: - |
API5 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_043346 {REF} {Length: 2749} {Pfam: Apoptosis inhibitory protein 5 (API5) [PF05918.13, score=309.2]; HEAT repeats [PF13646.8, score=22.4]} {Human: ENSG00000166181, API5, apoptosis inhibitor 5, [Score=250, Expect=2e-75]} {Mouse: ENSMUSG00000027193, Api5, apoptosis inhibitor 5, [Score=249, Expect=4e-75]} {Dmel: FBgn0027885, Aac11, [Score=192, Expect=6e-54]} {Smed: dd_Smed_v6_2384_0_1, dd_Smed_v6_2384_0_1, [RH, Score=140, Expect=8e-36]} {RNA1509_59316} {RNA1310_7983} {RNA815_2911.1} |
| 6. | MligTC455_17282 | 910 | 18.96 | Mlig455_013069 | Neo: - Age: - Region-enriched R5: 1.392/0.00382 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_013069 {REF} {Length: 1607} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=68.5]; Methyltransferase domain [PF08242.14, score=41.8]; Methyltransferase domain [PF13649.8, score=39.4]; Methyltransferase domain [PF13847.8, score=36.1]; Methyltransferase domain [PF08241.14, score=33.5]; Putative methyltransferase [PF02390.19, score=31.4]; Methyltransferase domain [PF12847.9, score=27.0]; RNA methyltransferase [PF05971.14, score=26.1]; Lysine methyltransferase [PF10294.11, score=24.4]; Methyltransferase domain [PF13489.8, score=24.3]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=23.7]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=23.4]; Conserved hypothetical protein 95 [PF03602.17, score=22.8]; Domain of unknown function (DUF2431) [PF10354.11, score=22.5]; Methyltransferase domain [PF13578.8, score=21.5]; tRNA (adenine(22)-N(1))-methyltransferase [PF04816.14, score=21.2]; Putative RNA methylase family UPF0020 [PF01170.20, score=19.8]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=19.7]} {RNA1509_4717} {RNA1310_19616, RNA1509_4717} {RNA1509_4717, RNA815_4785.2} | |
| 7. | MligTC455_37965 | 2119 | 44.14 | Mlig455_061609 | Neo: - Age: logFC(26M/2M)=-0.234 Region-enriched R4: 1.829/0.00050 |
HSD17B4 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_061609 {REF} {Length: 2731} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=134.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=111.9]; MaoC like domain [PF01575.21, score=97.6]; KR domain [PF08659.12, score=53.8]; SCP-2 sterol transfer family [PF02036.19, score=48.6]} {Human: ENSG00000133835, HSD17B4, hydroxysteroid 17-beta dehydrogenase 4, [RH, Score=778, Expect=0.0]} {Mouse: ENSMUSG00000024507, Hsd17b4, hydroxysteroid (17-beta) dehydrogenase 4, [RH, Score=754, Expect=0.0]} {Dmel: FBgn0030731, Mfe2, peroxisomal Multifunctional enzyme type 2, [RH, Score=591, Expect=0.0]} {Celegans: WBGene00000991, dhs-28, DeHydrogenases, Short chain, [RH, Score=358, Expect=1e-116]} {Smed: dd_Smed_v6_5867_0_1, dd_Smed_v6_5867_0_1, [RH, Score=605, Expect=0.0]} {RNA1509_1653, RNA1509_23131, RNA1509_39124, RNA1509_9012} {RNA1310_590.1, RNA1509_1653, RNA1509_23131, RNA1509_39124, RNA1509_9012} {RNA1509_1653, RNA1509_23131, RNA1509_39124, RNA1509_9012, RNA815_2204} |
| 8. | MligTC455_17281 | 861 | 17.93 | Mlig455_011804 | Neo: - Age: - Region-enriched R5: 1.520/0.00011 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_011804 {REF} {Length: 1544} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=68.5]; Methyltransferase domain [PF08242.14, score=41.8]; Methyltransferase domain [PF13649.8, score=39.4]; Methyltransferase domain [PF13847.8, score=36.1]; Methyltransferase domain [PF08241.14, score=33.6]; Putative methyltransferase [PF02390.19, score=31.4]; Methyltransferase domain [PF12847.9, score=27.0]; RNA methyltransferase [PF05971.14, score=26.1]; Lysine methyltransferase [PF10294.11, score=24.4]; Methyltransferase domain [PF13489.8, score=24.3]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=23.7]; RNA cap guanine-N2 methyltransferase [PF09445.12, score=23.4]; Conserved hypothetical protein 95 [PF03602.17, score=22.8]; Domain of unknown function (DUF2431) [PF10354.11, score=22.5]; Methyltransferase domain [PF13578.8, score=21.5]; tRNA (adenine(22)-N(1))-methyltransferase [PF04816.14, score=21.2]; Putative RNA methylase family UPF0020 [PF01170.20, score=19.8]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=19.7]} {RNA1509_4717} {RNA1310_19616} {RNA815_4785.2} |
Berezikov Lab - 2020-2021 © ERIBA