Data search


search
Exact
Search

Results for MligTC455_52721

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52721 546 11.37 Mlig455_043346

Neo: Int S/G2/M

Age: -

API5 Mlig455_043346 {REF} {Length: 2749} {Pfam: Apoptosis inhibitory protein 5 (API5) [PF05918.13, score=309.2]; HEAT repeats [PF13646.8, score=22.4]} {Human: ENSG00000166181, API5, apoptosis inhibitor 5, [Score=250, Expect=2e-75]} {Mouse: ENSMUSG00000027193, Api5, apoptosis inhibitor 5, [Score=249, Expect=4e-75]} {Dmel: FBgn0027885, Aac11, [Score=192, Expect=6e-54]} {Smed: dd_Smed_v6_2384_0_1, dd_Smed_v6_2384_0_1, [RH, Score=140, Expect=8e-36]} {RNA1509_59316} {RNA1310_7983} {RNA815_2911.1}

Cumulative graph for MligTC455_52721

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.879 3.823 0.17864 0.80659
RegionR2 0.107 3.823 0.86635 1.00000
RegionR3 0.404 3.823 0.41365 0.93918
RegionR4 -0.137 3.823 0.78836 1.00000
RegionR5 0.683 3.823 0.10383 0.31289
RegionR6 -0.333 3.823 0.55232 1.00000
RegionR7 0.984 3.823 0.09375 0.58612
RegionR8 0.17 3.823 0.84107 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.577 3.823 0.78515 1.00000
RegenerationR2 0.38 3.823 0.44291 0.84130
RegenerationR3 0.471 3.823 0.35338 0.77268
RegenerationR4 0.845 3.823 0.08220 0.45343
RegenerationR5 0.847 3.823 0.05768 0.38352
RegenerationR6 1.7 3.823 0.00150 0.04331
RegenerationBL 1.447 3.823 0.00594 0.07337
RegenerationTP -0.362 3.823 0.61127 0.96755


Genes with expression patterns similar to MligTC455_52721

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52721 546 11.37 Mlig455_043346

Neo: Int S/G2/M

Age: -

API5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_043346 {REF} {Length: 2749} {Pfam: Apoptosis inhibitory protein 5 (API5) [PF05918.13, score=309.2]; HEAT repeats [PF13646.8, score=22.4]} {Human: ENSG00000166181, API5, apoptosis inhibitor 5, [Score=250, Expect=2e-75]} {Mouse: ENSMUSG00000027193, Api5, apoptosis inhibitor 5, [Score=249, Expect=4e-75]} {Dmel: FBgn0027885, Aac11, [Score=192, Expect=6e-54]} {Smed: dd_Smed_v6_2384_0_1, dd_Smed_v6_2384_0_1, [RH, Score=140, Expect=8e-36]} {RNA1509_59316} {RNA1310_7983} {RNA815_2911.1}
2. MligTC455_18207 1183 24.64 Mlig455_049340, Mlig455_049418

Neo: Int S/G2/M

Age: -

GAMT 3.458 0.857 - - 0.960 0.873 0.768

Mlig455_049340 {REF} {Length: 2324} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.2]; Ankyrin repeats (many copies) [PF13637.8, score=32.5]; Ankyrin repeat [PF00023.32, score=26.8]; Ankyrin repeat [PF13606.8, score=23.2]; Ankyrin repeats (many copies) [PF13857.8, score=22.3]; Methyltransferase domain [PF13649.8, score=21.7]} {Human: ENSG00000130005, GAMT, guanidinoacetate N-methyltransferase, [Score=67.0, Expect=4e-12]} {Mouse: ENSMUSG00000020150, Gamt, guanidinoacetate methyltransferase, [RH, Score=65.5, Expect=7e-12]} {Dmel: FBgn0039590, CG10011, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_5577_0_1, dd_Smed_v6_5577_0_1, [RH, Score=353, Expect=9e-121]} {RNA1509_18687} {RNA1310_24688} {RNA815_9003}

Mlig455_049418 {REF} {Length: 2605} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.3]; Ankyrin repeats (many copies) [PF13637.8, score=31.7]; Methyltransferase domain [PF13649.8, score=26.2]; Ankyrin repeat [PF00023.32, score=25.8]; Ankyrin repeat [PF13606.8, score=21.8]; Ankyrin repeats (many copies) [PF13857.8, score=21.1]} {Human: ENSG00000130005, GAMT, guanidinoacetate N-methyltransferase, [RH, Score=73.6, Expect=2e-14]} {Mouse: ENSMUSG00000020150, Gamt, guanidinoacetate methyltransferase, [RH, Score=68.6, Expect=7e-13]} {Dmel: FBgn0039590, CG10011, [Score=48.5, Expect=8e-06]} {Smed: dd_Smed_v6_5577_0_1, dd_Smed_v6_5577_0_1, [RH, Score=356, Expect=1e-121]} {RNA1509_18687, RNA1509_22658} {RNA1310_24688, RNA1509_18687, RNA1509_22658} {RNA1509_18687, RNA1509_22658, RNA815_9003}
3. MligTC455_20022 767 15.97 Mlig455_022377, Mlig455_022465

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.385

Region-enriched R5: 1.142/0.02757

NSD2 2.444 0.783 - - 0.952 0.709 -

Mlig455_022377 {REF} {Length: 3316} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=107.7]; PHD-finger [PF00628.31, score=33.9]; AWS domain [PF17907.3, score=22.3]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=208, Expect=2e-54]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [Score=198, Expect=4e-51]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=5e-55]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=200, Expect=8e-52]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=168, Expect=4e-42]} {Smed: dd_Smed_v6_10189_0_1, dd_Smed_v6_10189_0_1, [Score=187, Expect=8e-49]} {RNA1509_22588} {RNA1310_10794.1} {RNA815_16118}

Mlig455_022465 {REF} {Length: 3496} {Pfam: PWWP domain [PF00855.19, score=107.2]; PHD-finger [PF00628.31, score=33.7]; AWS domain [PF17907.3, score=21.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=18.7]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=206, Expect=9e-54]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=207, Expect=3e-54]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=197, Expect=8e-51]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=170, Expect=1e-42]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [Score=184, Expect=3e-48]} {RNA1509_22588} {RNA1310_10794.1} {RNA815_16118}
4. MligTC455_25436 822 17.13 Mlig455_023812

Neo: Int S/G2/M

Age: -

Region-specific R5: 1.940

Region-enriched R5: 1.568/0.00000

1.897 - - - 0.947 0.950 - Mlig455_023812 {REF} {Length: 2865} {TRANSSPLICED} {RNA1509_35998, RNA1509_5963} {RNA1310_13597, RNA1509_35998, RNA1509_5963} {RNA1509_35998, RNA1509_5963, RNA815_5824}
5. MligTC455_12128 236 4.91 Mlig455_022096, Mlig455_053634

Neo: -

Age: -

Region-enriched R5: 2.162/0.01635

1.729 0.776 - - - - 0.953

Mlig455_022096 {REF} {Length: 2464} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=21.8]; F-box domain [PF00646.35, score=21.6]} {RNA1509_24923} {RNA1310_14282} {RNA815_5392}

Mlig455_053634 {REF} {Length: 2470} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=21.8]; F-box domain [PF00646.35, score=21.6]} {RNA1509_24923} {RNA1310_14282, RNA1509_24923} {RNA1509_24923, RNA815_5392}
6. MligTC455_35115 2916 60.74 Mlig455_030023

Neo: Neoblast, stringent

Age: -

Regeneration-enriched BL: 1.662
Regeneration-enriched R6: 1.336

SRSF4 1.724 - - - 0.965 - 0.759 Mlig455_030023 {REF} {Length: 1979} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=96.2]; RNA binding motif [PF08777.13, score=23.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.0]; Occluded RNA-recognition motif [PF16842.7, score=21.7]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=188, Expect=5e-55]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=192, Expect=7e-57]} {Dmel: FBgn0004587, B52, [Score=169, Expect=1e-49]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=147, Expect=5e-42]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=179, Expect=7e-54]} {RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703} {RNA1310_10967, RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703} {RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703, RNA815_8646}
7. MligTC455_23110 1801 37.52 Mlig455_015205

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.104/0.00009

EIF4G3 1.675 - - - 0.952 - 0.723 Mlig455_015205 {REF} {Length: 5800} {Pfam: MIF4G domain [PF02854.21, score=100.5]; MA3 domain [PF02847.19, score=22.8]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=298, Expect=1e-81]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=290, Expect=4e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=309, Expect=5e-85]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [Score=155, Expect=2e-37]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=208, Expect=7e-59]} {RNA1509_5307, RNA1509_828} {RNA1310_788.1, RNA1509_5307, RNA1509_828} {RNA1509_5307, RNA1509_828, RNA815_583}
8. MligTC455_31397 3443 71.74 Mlig455_015314

Neo: -

Age: logFC(26M/2M)=1.868

Region-enriched R4: 1.109/0.00012

UQCRC1 0.968 - - - - 0.968 - Mlig455_015314 {REF} {Length: 2042} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=149.3]; Peptidase M16 inactive domain [PF05193.23, score=81.2]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=436, Expect=1e-149]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=426, Expect=3e-145]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [RH, Score=424, Expect=7e-145]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=445, Expect=2e-153]} {Celegans: WBGene00018963, ucr-1, Cytochrome b-c1 complex subunit 1, mitochondrial, [RH, Score=304, Expect=2e-98]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [RH, Score=363, Expect=8e-122]} {RNA1509_1290} {RNA1310_14001.1} {RNA815_4919}
9. MligTC455_31398 3420 71.25 Mlig455_032995

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.361

Region-enriched R4: 1.126/0.00012

UQCRC1 0.956 - - - - 0.956 - Mlig455_032995 {REF} {Length: 1933} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=91.7]; Peptidase M16 inactive domain [PF05193.23, score=77.2]} {Human: ENSG00000010256, UQCRC1, ubiquinol-cytochrome c reductase core protein 1, [Score=369, Expect=1e-123]; ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [Score=357, Expect=5e-119]} {Mouse: ENSMUSG00000107235, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [Score=357, Expect=3e-119]; ENSMUSG00000025651, Uqcrc1, ubiquinol-cytochrome c reductase core protein 1, [Score=357, Expect=3e-119]; ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [Score=356, Expect=8e-119]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [Score=380, Expect=1e-128]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [Score=242, Expect=3e-75]} {Smed: dd_Smed_v6_729_0_1, dd_Smed_v6_729_0_1, [Score=302, Expect=3e-98]} {RNA1509_1290} {RNA1310_14001.1} {RNA815_4919}
10. MligTC455_26457 836 17.43 Mlig455_001958

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.330

Region-enriched R5: 1.295/0.00399

0.955 - - - 0.955 - - Mlig455_001958 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Regulatory factor X-associated C-terminal binding domain [PF15289.8, score=19.6]} {RNA1509_43649, RNA1509_50433} {RNA1310_19279, RNA1509_43649, RNA1509_50433} {RNA1509_43649, RNA1509_50433, RNA815_22593}
11. MligTC455_34528 264 5.5 Mlig455_060288

Neo: -

Age: -

RAD9A 0.955 - - - - 0.955 - Mlig455_060288 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: Rad9 [PF04139.15, score=160.9]} {Human: ENSG00000172613, RAD9A, RAD9 checkpoint clamp component A, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000097909, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]; ENSMUSG00000024824, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]} {Smed: dd_Smed_v6_14121_0_1, dd_Smed_v6_14121_0_1, [RH, Score=167, Expect=4e-47]} {RNA1509_21321} {RNA1310_15353.1} {RNA815_16837}
12. MligTC455_35451 1005 20.93 Mlig455_004134, Mlig455_060505

Neo: -

Age: logFC(26M/2M)=0.571

DPH6 0.953 - - - 0.953 - -

Mlig455_004134 {REF} {Length: 3570} {TRANSSPLICED} {Pfam: Diphthamide synthase [PF01902.19, score=116.5]; Endoribonuclease L-PSP [PF01042.23, score=27.7]} {Human: ENSG00000134146, DPH6, diphthamine biosynthesis 6, [RH, Score=255, Expect=8e-80]} {Mouse: ENSMUSG00000057147, Dph6, diphthamine biosynthesis 6, [RH, Score=255, Expect=4e-80]} {Dmel: FBgn0030336, CG1578, [RH, Score=250, Expect=6e-72]} {Celegans: WBGene00017087, E01A2.5, Diphthine--ammonia ligase, [RH, Score=248, Expect=1e-77]} {Smed: dd_Smed_v6_13307_0_1, dd_Smed_v6_13307_0_1, [RH, Score=294, Expect=7e-91]} {RNA1509_25405} {RNA1310_11460.1, RNA1509_25405} {RNA1509_25405, RNA815_8423}

Mlig455_060505 {REF} {Length: 2302} {Pfam: Diphthamide synthase [PF01902.19, score=95.5]; Endoribonuclease L-PSP [PF01042.23, score=28.3]} {Human: ENSG00000134146, DPH6, diphthamine biosynthesis 6, [Score=205, Expect=1e-60]} {Mouse: ENSMUSG00000057147, Dph6, diphthamine biosynthesis 6, [Score=206, Expect=3e-61]} {Dmel: FBgn0030336, CG1578, [Score=194, Expect=2e-52]} {Celegans: WBGene00017087, E01A2.5, Diphthine--ammonia ligase, [Score=194, Expect=4e-57]} {Smed: dd_Smed_v6_13307_0_1, dd_Smed_v6_13307_0_1, [Score=256, Expect=1e-76]} {RNA1509_25405, RNA1509_54343} {RNA1310_11460.1, RNA1509_54343} {RNA1509_54343, RNA815_8423}
13. MligTC455_19269 2767 57.65 Mlig455_000008

Neo: -

Age: -

WASHC3 0.952 - - - - 0.952 - Mlig455_000008 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=127.7]} {Human: ENSG00000120860, WASHC3, WASH complex subunit 3, [RH, Score=114, Expect=3e-31]} {Mouse: ENSMUSG00000020056, Washc3, WASH complex subunit 3, [RH, Score=113, Expect=3e-31]} {Dmel: FBgn0031979, CCDC53, Coiled-coil domain containing 53, [RH, Score=99.0, Expect=7e-26]} {Celegans: WBGene00019125, ddl-1, WASH complex subunit homolog 3, [Score=62.8, Expect=3e-12]} {RNA1509_22435, RNA1509_39290} {RNA1310_32670, RNA1509_22435} {RNA1509_22435, RNA815_15168.1}
14. MligTC455_29287 675 14.06 Mlig455_049797

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.343

RRBP1 0.952 - - 0.952 - - - Mlig455_049797 {REF} {Length: 4084} {TRANSSPLICED} {Human: ENSG00000125844, RRBP1, ribosome binding protein 1, [Score=57.8, Expect=1e-07]; ENSG00000126777, KTN1, kinectin 1, [Score=56.2, Expect=3e-07]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=60.1, Expect=1e-08]} {Smed: dd_Smed_v6_1111_0_1, dd_Smed_v6_1111_0_1, [RH, Score=103, Expect=1e-22]} {RNA1509_11298} {RNA1310_4678} {RNA815_2519}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA