TomoSeq data search

Data search

Results for MligTC455_31415

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31415

41

0.86

Mlig455_061155

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.824

Mlig455_061155 {REF} {Length: 286} {NoTransDecoderORF} {RNA1509_249} {RNA1310_40896} {RNA815_18704}

Cumulative graph for MligTC455_31415

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	3.425	1.279	0.99997	1.00000
RegionR2	-1.085	1.279	0.99993	1.00000
RegionR3	-0.906	1.279	0.99995	1.00000
RegionR4	1.666	1.279	1.00000	1.00000
RegionR5	-0.625	1.279	0.99992	1.00000
RegionR6	-0.892	1.279	0.99997	1.00000
RegionR7	-0.733	1.279	0.99999	1.00000
RegionR8	-0.85	1.279	0.99999	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.011	1.279	1.00000	1.00000
RegenerationR2	4.545	1.279	0.00083	0.04165
RegenerationR3	4.83	1.279	0.00732	0.15674
RegenerationR4	4.608	1.279	0.00684	0.11965
RegenerationR5	4.586	1.279	0.00189	0.07460
RegenerationR6	5.695	1.279	0.00136	0.04101
RegenerationBL	6.172	1.279	0.00169	0.03224
RegenerationTP	3.698	1.279	0.17825	0.61322

Genes with expression patterns similar to MligTC455_31415

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31415	41	0.86	Mlig455_061155	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.824		3	-	-	-	1.000	1.000	1.000	Mlig455_061155 {REF} {Length: 286} {NoTransDecoderORF} {RNA1509_249} {RNA1310_40896} {RNA815_18704}
2.	MligTC455_50105	352	7.33	Mlig455_042985, Mlig455_043018	Neo: - Age: - Region-enriched R5: 1.193/0.04259	KDELR2	1.813	-	-	-	0.861	0.952	-	Mlig455_042985 {REF} {Length: 1614} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=192.3]} {Human: ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [RH, Score=325, Expect=4e-114]} {Mouse: ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [RH, Score=325, Expect=4e-114]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [RH, Score=335, Expect=3e-118]} {Celegans: WBGene00001331, erd-2, ER lumen protein-retaining receptor, [RH, Score=300, Expect=9e-105]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [RH, Score=342, Expect=2e-121]} {RNA1509_38943} {RNA1310_15335} {RNA815_5191} Mlig455_043018 {REF} {Length: 1566} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=192.3]} {Human: ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [RH, Score=325, Expect=4e-114]} {Mouse: ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [RH, Score=325, Expect=4e-114]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [RH, Score=335, Expect=3e-118]} {Celegans: WBGene00001331, erd-2, ER lumen protein-retaining receptor, [RH, Score=300, Expect=9e-105]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [RH, Score=342, Expect=2e-121]} {RNA1509_19108} {RNA1310_15335} {RNA815_5191}
3.	MligTC455_08716	32	0.67	Mlig455_004311	Neo: - Age: Up-Down-Down	IPO9	0.965	-	-	-	0.965	-	-	Mlig455_004311 {REF} {Length: 4847} {TRANSSPLICED} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=26.9]; rRNA processing/ribosome biogenesis [PF08167.14, score=22.9]; Exportin 1-like protein [PF08389.14, score=19.2]} {Human: ENSG00000198700, IPO9, importin 9, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000041879, Ipo9, importin 9, [RH, Score=564, Expect=0.0]} {Dmel: FBgn0037894, Ranbp9, [RH, Score=374, Expect=8e-113]} {RNA1509_15102} {RNA1310_3940} {RNA815_16834}
4.	MligTC455_11711	12	0.26	Mlig455_056966	Neo: Int S/G2/M Age: Up-Down-Down	KCTD1	0.952	-	-	-	-	0.952	-	Mlig455_056966 {REF} {Length: 3083} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=65.1, Expect=1e-10]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=65.1, Expect=1e-10]} {RNA1509_2526} {RNA1310_23350.1} {RNA815_19699.2}
5.	MligTC455_29530	3892	81.07	Mlig455_045612	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.295 Regeneration-enriched BL: 1.295	PSMB3	0.952	-	-	-	-	0.952	-	Mlig455_045612 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=125.9]} {Human: ENSG00000275903, PSMB3, proteasome subunit beta 3, [RH, Score=302, Expect=7e-105]; ENSG00000277791, PSMB3, proteasome subunit beta 3, [RH, Score=302, Expect=7e-105]} {Mouse: ENSMUSG00000069744, Psmb3, proteasome (prosome, macropain) subunit, beta type 3, [RH, Score=300, Expect=2e-104]; ENSMUSG00000069379, Gm4950, predicted pseudogene 4950, [RH, Score=286, Expect=9e-99]} {Dmel: FBgn0026380, Prosbeta3, Proteasome beta3 subunit, [RH, Score=293, Expect=1e-101]} {Celegans: WBGene00003949, pbs-3, Proteasome subunit beta type-3, [RH, Score=238, Expect=4e-80]} {Smed: dd_Smed_v6_1241_0_1, dd_Smed_v6_1241_0_1, [RH, Score=308, Expect=8e-108]} {RNA1509_18359, RNA1509_2610, RNA1509_38371} {RNA1310_21776.1, RNA1509_18359, RNA1509_2610, RNA1509_38371} {RNA1509_18359, RNA1509_2610, RNA1509_38371, RNA815_8871.1}
6.	MligTC455_04104	196	4.09	Mlig455_012083	Neo: Int S/G2/M Age: logFC(26M/2M)=0.482 Region-enriched R5: 2.703/0.00002	TMEM201	0.95	-	-	-	-	0.950	-	Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1}

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