Data search
Results for MligTC455_04104
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04104 | 196 | 4.09 | Mlig455_012083 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.482 Region-enriched R5: 2.703/0.00002 |
TMEM201 | Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1} |
Cumulative graph for MligTC455_04104
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.038 | 2.585 | 0.84845 | 1.00000 | |
| RegionR2 | 0.789 | 2.585 | 0.41870 | 0.81054 | |
| RegionR3 | 1.099 | 2.585 | 0.15498 | 0.66598 | |
| RegionR4 | -0.117 | 2.585 | 0.83906 | 1.00000 | |
| RegionR5 | 2.703 | 2.585 | 0.00000 | 0.00002 | |
| RegionR6 | 1.355 | 2.585 | 0.07664 | 0.51369 | |
| RegionR7 | -0.151 | 2.585 | 0.86137 | 1.00000 | |
| RegionR8 | -5.641 | 2.585 | 0.04748 | 0.42741 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.023 | 2.585 | 0.51061 | 1.00000 | |
| RegenerationR2 | -0.015 | 2.585 | 0.97131 | 1.00000 | |
| RegenerationR3 | -0.284 | 2.585 | 0.68215 | 0.94093 | |
| RegenerationR4 | 0.609 | 2.585 | 0.40175 | 0.81445 | |
| RegenerationR5 | -0.128 | 2.585 | 0.82271 | 0.99503 | |
| RegenerationR6 | 0.525 | 2.585 | 0.42936 | 0.75769 | |
| RegenerationBL | 3.99 | 2.585 | 0.00036 | 0.01124 | |
| RegenerationTP | 2.934 | 2.585 | 0.16153 | 0.59030 |
Genes with expression patterns similar to MligTC455_04104
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04104 | 196 | 4.09 | Mlig455_012083 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.482 Region-enriched R5: 2.703/0.00002 |
TMEM201 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1} |
| 2. | MligTC455_47497 | 103 | 2.15 | Mlig455_055557 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 4.901 Regeneration-enriched BL: 4.901 |
1.727 | - | - | - | 0.969 | - | 0.758 | Mlig455_055557 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_24901} {RNA1310_65244} {RNA815_52866} | |
| 3. | MligTC455_15471 | 310 | 6.45 | Mlig455_022527 | Neo: Irradiation Age: logFC(26M/2M)=0.502 Region-enriched R5: 3.024/0.00001 |
CHEK1 | 1.713 | - | - | - | 0.738 | - | 0.975 | Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053} |
| 4. | MligTC455_37287 | 2255 | 46.99 | Mlig455_059849 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.244/0.00011 |
BANF1 | 1.679 | - | - | - | - | 0.725 | 0.954 | Mlig455_059849 {REF} {Length: 855} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=141.3]; IMS family HHH motif [PF11798.10, score=24.4]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=129, Expect=3e-40]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=127, Expect=1e-39]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=122, Expect=7e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [RH, Score=104, Expect=4e-31]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=132, Expect=3e-42]} {RNA1509_15688, RNA1509_29890, RNA1509_9203} {RNA1310_41208, RNA1509_15688, RNA1509_29890, RNA1509_9203} {RNA1509_15688, RNA1509_29890, RNA1509_9203, RNA815_19901} |
| 5. | MligTC455_29398 | 20 | 0.42 | Mlig455_060631 | Neo: Int S/G2/M Age: - |
RAPGEF2 | 0.981 | - | - | - | - | - | 0.981 | Mlig455_060631 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=45.1]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=132, Expect=1e-30]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=132, Expect=9e-31]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=111, Expect=1e-24]} {Smed: dd_Smed_v6_4950_0_4, dd_Smed_v6_4950_0_4, [Score=152, Expect=3e-37]} {RNA1509_46298} {RNA1310_2774.1} {RNA815_13348} |
| 6. | MligTC455_49427 | 216 | 4.49 | Mlig455_005037 | Neo: Irradiation Age: - Region-enriched R5: 2.616/0.00000 |
0.977 | - | - | - | - | - | 0.977 | Mlig455_005037 {REF} {Length: 3393} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=45.6]; Zinc finger, C2H2 type [PF00096.28, score=24.9]; C2H2-type zinc finger [PF13894.8, score=21.4]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=2e-48]} {RNA1509_19024} {RNA1310_8889} {RNA815_15557} | |
| 7. | MligTC455_25108 | 274 | 5.7 | Mlig455_007552 | Neo: Germline Age: Down-Up-Down Region-enriched R5: 2.880/0.00012 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_007552 {REF} {Length: 3123} {RNA1509_7988} {RNA1310_50308} {RNA815_8058.1} | |
| 8. | MligTC455_14260 | 24 | 0.49 | Mlig455_057199 | Neo: Irradiation Age: logFC(26M/2M)=0.576 |
RARB | 0.968 | - | - | - | - | - | 0.968 | Mlig455_057199 {REF} {Length: 3614} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=107.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=49.7]} {Human: ENSG00000077092, RARB, retinoic acid receptor beta, [RH, Score=223, Expect=6e-67]; ENSG00000131759, RARA, retinoic acid receptor alpha, [RH, Score=219, Expect=3e-65]; ENSG00000172819, RARG, retinoic acid receptor gamma, [RH, Score=218, Expect=1e-65]} {Mouse: ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [RH, Score=222, Expect=7e-67]; ENSMUSG00000001288, Rarg, retinoic acid receptor, gamma, [RH, Score=218, Expect=3e-65]; ENSMUSG00000037992, Rara, retinoic acid receptor, alpha, [RH, Score=217, Expect=1e-64]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [RH, Score=142, Expect=5e-37]} {RNA1310_25263} {RNA815_35184} |
| 9. | MligTC455_20472 | 198 | 4.12 | Mlig455_000155 | Neo: - Age: Up-Down-Up Region-enriched R5: 2.500/0.04234 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_000155 {REF} {Length: 5853} {RNA1509_3271, RNA1509_42661, RNA1509_48824, RNA1509_52749, RNA1509_56833} {RNA1310_1022.1, RNA1509_3271, RNA1509_42661, RNA1509_48824, RNA1509_52749, RNA1509_56833} {RNA1509_3271, RNA1509_42661, RNA1509_48824, RNA1509_52749, RNA1509_56833, RNA815_5895} | |
| 10. | MligTC455_13489 | 99 | 2.06 | Mlig455_052411 | Neo: Irradiation Age: - Region-enriched R5: 2.712/0.02804 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_052411 {REF} {Length: 1290} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.9]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1} | |
| 11. | MligTC455_22678 | 311 | 6.49 | Mlig455_020944 | Neo: Irradiation Age: logFC(26M/2M)=0.263 Region-enriched R5: 5.543/0.00000 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_020944 {REF} {Length: 4341} {RNA1509_50172} {RNA1310_4808} {RNA815_7567.1} | |
| 12. | MligTC455_35645 | 3253 | 67.78 | Mlig455_067468 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.385 Region-enriched R7: 1.801/0.00002 |
CALR | 0.958 | - | - | - | - | 0.958 | - | Mlig455_067468 {REF} {Length: 3017} {Pfam: Calreticulin family [PF00262.20, score=288.0]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=498, Expect=6e-176]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [RH, Score=498, Expect=6e-176]} {Dmel: FBgn0005585, Calr, Calreticulin, [RH, Score=498, Expect=3e-176]} {Celegans: WBGene00000802, crt-1, Calreticulin, [RH, Score=468, Expect=7e-165]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [RH, Score=558, Expect=0.0]} {RNA1509_5040} {RNA1310_10824.1, RNA1509_5040} {RNA1509_5040, RNA815_3782.1} |
| 13. | MligTC455_25439 | 669 | 13.95 | Mlig455_006324 | Neo: Irradiation Age: - Region-specific R5: 2.180 Region-enriched R5: 1.387/0.00026 |
PWP2 | 0.954 | - | 0.954 | - | - | - | - | Mlig455_006324 {REF} {Length: 3362} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=136.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=84.8]; Dip2/Utp12 Family [PF04003.14, score=38.1]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.6]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.4]} {Human: ENSG00000241945, PWP2, PWP2, small subunit processome component, [RH, Score=516, Expect=2e-168]; ENSG00000275464, FP565260.1, periodic tryptophan protein 2 homolog, [RH, Score=514, Expect=8e-168]} {Mouse: ENSMUSG00000032834, Pwp2, PWP2 periodic tryptophan protein homolog (yeast), [RH, Score=500, Expect=1e-162]} {Dmel: FBgn0033557, CG12325, [RH, Score=518, Expect=3e-169]} {Celegans: WBGene00018891, F55F8.3, Periodic tryptophan protein 2 homolog, [RH, Score=404, Expect=4e-126]} {Smed: dd_Smed_v6_6675_0_1, dd_Smed_v6_6675_0_1, [RH, Score=431, Expect=4e-137]} {RNA1509_25628, RNA1509_5746} {RNA1310_3870, RNA1509_25628, RNA1509_5746} {RNA1509_25628, RNA1509_5746, RNA815_1579} |
| 14. | MligTC455_44338 | 719 | 14.98 | Mlig455_041655 | Neo: Irradiation Age: - Region-enriched R5: 2.104/0.00000 |
TECTB | 0.954 | - | 0.954 | - | - | - | - | Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844} |
| 15. | MligTC455_41790 | 350 | 7.3 | Mlig455_013734 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.281 Region-enriched R5: 1.651/0.00086 |
SDR16C5 | 0.953 | - | 0.953 | - | - | - | - | Mlig455_013734 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=144.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=96.3]; KR domain [PF08659.12, score=37.6]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=209, Expect=1e-65]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=213, Expect=4e-67]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=2e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=187, Expect=2e-57]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [RH, Score=219, Expect=2e-69]} {RNA1509_31599, RNA1509_38654, RNA1509_38684} {RNA1310_34497, RNA1509_38654, RNA1509_38684} {RNA1509_38654, RNA1509_38684, RNA815_11020.2} |
| 16. | MligTC455_19434 | 653 | 13.61 | Mlig455_011295, Mlig455_011385 | Neo: - Age: - |
NFAT5 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_011295 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Rel homology dimerisation domain [PF16179.7, score=74.5]; Rel homology DNA-binding domain [PF00554.24, score=66.7]} {Human: ENSG00000102908, NFAT5, nuclear factor of activated T cells 5, [Score=249, Expect=3e-70]} {Mouse: ENSMUSG00000003847, Nfat5, nuclear factor of activated T cells 5, [Score=250, Expect=1e-70]} {Dmel: FBgn0030505, NFAT, NFAT nuclear factor, [Score=207, Expect=6e-59]} {Smed: dd_Smed_v6_5978_0_1, dd_Smed_v6_5978_0_1, [Score=236, Expect=1e-67]} {RNA1509_23613} {RNA1310_12414.1} {RNA815_18748} Mlig455_011385 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: Rel homology dimerisation domain [PF16179.7, score=74.5]; Rel homology DNA-binding domain [PF00554.24, score=56.2]} {Human: ENSG00000102908, NFAT5, nuclear factor of activated T cells 5, [Score=241, Expect=1e-67]} {Mouse: ENSMUSG00000003847, Nfat5, nuclear factor of activated T cells 5, [Score=242, Expect=4e-68]} {Dmel: FBgn0030505, NFAT, NFAT nuclear factor, [Score=199, Expect=9e-56]} {Smed: dd_Smed_v6_5978_0_1, dd_Smed_v6_5978_0_1, [Score=228, Expect=8e-65]} {RNA1509_23613} {RNA1310_12414.1} {RNA815_18748} |
| 17. | MligTC455_42522 | 34 | 0.7 | Mlig455_006416 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_006416 {REF} {Length: 1135} {Pfam: Nucleotide-binding C-terminal domain [PF17042.7, score=19.7]} {RNA1509_29406} {RNA1310_30762} {RNA815_22447} | |
| 18. | MligTC455_31415 | 41 | 0.86 | Mlig455_061155 | Neo: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_061155 {REF} {Length: 286} {NoTransDecoderORF} {RNA1509_249} {RNA1310_40896} {RNA815_18704} | |
| 19. | MligTC455_47270 | 139 | 2.9 | Mlig455_057576 | Neo: Irradiation Age: Down-Up-Up |
0.95 | - | - | - | - | - | 0.950 | Mlig455_057576 {REF} {Length: 2184} {RNA1310_33879} {RNA815_33583} |
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