Data search
Results for MligTC455_31474
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31474 | 1403 | 29.23 | Mlig455_066249, Mlig455_066266 | Neo: - Age: Down-Up-Down Regeneration-enriched TP: 6.671 |
NR1H3 | Mlig455_066249 {REF} {Length: 3399} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=28.4]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=155, Expect=4e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=151, Expect=9e-40]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=147, Expect=5e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=125, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=104, Expect=7e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041} Mlig455_066266 {REF} {Length: 3380} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=28.4]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=155, Expect=8e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=150, Expect=2e-39]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=146, Expect=7e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=125, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=105, Expect=5e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041} |
Cumulative graph for MligTC455_31474
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.536 | 5.002 | 0.99959 | 1.00000 | |
| RegionR2 | 0.564 | 5.002 | 0.59503 | 0.94691 | |
| RegionR3 | 1.522 | 5.002 | 0.21585 | 0.75728 | |
| RegionR4 | 2.861 | 5.002 | 0.05752 | 0.21187 | |
| RegionR5 | 0.742 | 5.002 | 0.52283 | 0.88585 | |
| RegionR6 | 1.756 | 5.002 | 0.16613 | 0.72114 | |
| RegionR7 | 1.639 | 5.002 | 0.23196 | 0.85583 | |
| RegionR8 | -5.548 | 5.002 | 0.99981 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.035 | 5.002 | 0.99999 | 1.00000 | |
| RegenerationR2 | 3.317 | 5.002 | 0.00184 | 0.06618 | |
| RegenerationR3 | 2.93 | 5.002 | 0.01220 | 0.20288 | |
| RegenerationR4 | 2.585 | 5.002 | 0.03295 | 0.29328 | |
| RegenerationR5 | 4.512 | 5.002 | 0.00015 | 0.01771 | |
| RegenerationR6 | 4.16 | 5.002 | 0.00029 | 0.01677 | |
| RegenerationBL | 5.974 | 5.002 | 0.00000 | 0.00004 | |
| RegenerationTP | 6.671 | 5.002 | 0.00002 | 0.00339 |
Genes with expression patterns similar to MligTC455_31474
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31474 | 1403 | 29.23 | Mlig455_066249, Mlig455_066266 | Neo: - Age: Down-Up-Down Regeneration-enriched TP: 6.671 |
NR1H3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066249 {REF} {Length: 3399} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=28.4]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=155, Expect=4e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=151, Expect=9e-40]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=147, Expect=5e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=125, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=104, Expect=7e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041} Mlig455_066266 {REF} {Length: 3380} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=28.4]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=155, Expect=8e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=150, Expect=2e-39]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=146, Expect=7e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=125, Expect=4e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=105, Expect=5e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041} |
| 2. | MligTC455_04204 | 293 | 6.11 | Mlig455_005956 | Neo: - Age: Down-Up-Up |
ZNF569 | 1.72 | - | - | - | 0.967 | - | 0.753 | Mlig455_005956 {REF} {Length: 4556} {Pfam: C2H2-type zinc finger [PF13894.8, score=70.9]; Zinc finger, C2H2 type [PF00096.28, score=48.6]; Zinc-finger double domain [PF13465.8, score=27.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=27.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=20.9]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.5]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=80.1, Expect=8e-15]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=77.0, Expect=5e-14]; ENSMUSG00000033669, Zfp7, zinc finger protein 7, [Score=73.6, Expect=7e-13]} {Dmel: FBgn0037120, CG11247, [Score=50.8, Expect=4e-06]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=52.8, Expect=4e-07]} {RNA1509_25692} {RNA1310_4035.1} {RNA815_2236} |
| 3. | MligTC455_04205 | 259 | 5.4 | Mlig455_005959 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.672 |
ZNF569 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_005959 {REF} {Length: 4659} {Pfam: C2H2-type zinc finger [PF13894.8, score=86.2]; Zinc finger, C2H2 type [PF00096.28, score=60.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=29.2]; Zinc-finger double domain [PF13465.8, score=26.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=24.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.5]} {Human: ENSG00000196437, ZNF569, zinc finger protein 569, [Score=78.6, Expect=3e-14]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=76.6, Expect=1e-13]} {Dmel: FBgn0037120, CG11247, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=52.4, Expect=8e-07]} {RNA1509_25692, RNA1509_41} {RNA1310_4035.1, RNA1509_41} {RNA1509_41, RNA815_2236} |
| 4. | MligTC455_28659 | 416 | 8.67 | Mlig455_024182 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | - | - | 0.953 | Mlig455_024182 {REF} {Length: 2105} {RNA1509_38550} {RNA1310_39388.2} {RNA815_16516.1} | |
| 5. | MligTC455_35550 | 182 | 3.79 | Mlig455_060126 | Neo: - Age: - |
TOPORS | 0.952 | - | - | - | - | - | 0.952 | Mlig455_060126 {REF} {Length: 3857} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.9]; Ring finger domain [PF13639.8, score=27.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.7]} {Human: ENSG00000197579, TOPORS, TOP1 binding arginine/serine rich protein, [RH, Score=99.0, Expect=2e-20]} {Mouse: ENSMUSG00000036822, Topors, topoisomerase I binding, arginine/serine-rich, [RH, Score=99.8, Expect=9e-21]} {Dmel: FBgn0267351, Topors, Topoisomerase I-interacting protein, [RH, Score=99.8, Expect=6e-21]} {RNA1509_21169} {RNA1310_6385.1} {RNA815_19085.1} |