Data search
Results for MligTC455_31565
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31565 | 1493 | 31.10 | Mlig455_021821 | Neo: Neoblast, stringent Age: - |
LNX2 | Mlig455_021821 {REF} {Length: 2215} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.1]; RING-type zinc-finger [PF13445.8, score=34.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.9]; Ring finger domain [PF13639.8, score=30.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.7]; U-box domain [PF04564.17, score=23.0]; zinc-RING finger domain [PF14634.8, score=22.1]; RING-H2 zinc finger domain [PF12678.9, score=19.7]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=63.9, Expect=1e-10]} {Mouse: ENSMUSG00000008482, Rnf151, ring finger protein 151, [RH, Score=75.5, Expect=2e-15]} {Dmel: FBgn0265464, Traf6, TNF-receptor-associated factor 6, [Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_6297_0_2, dd_Smed_v6_6297_0_2, [RH, Score=119, Expect=4e-32]} {RNA1509_33996, RNA1509_7107} {RNA1310_11993, RNA1509_33996, RNA1509_7107} {RNA1509_33996, RNA1509_7107, RNA815_4996.1} |
Cumulative graph for MligTC455_31565
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.392 | 5.106 | 0.57818 | 1.00000 | |
| RegionR2 | 0.155 | 5.106 | 0.69922 | 1.00000 | |
| RegionR3 | -0.202 | 5.106 | 0.54489 | 1.00000 | |
| RegionR4 | 0.372 | 5.106 | 0.27159 | 0.57731 | |
| RegionR5 | 0.51 | 5.106 | 0.07182 | 0.24259 | |
| RegionR6 | -0.014 | 5.106 | 0.96752 | 1.00000 | |
| RegionR7 | 0.473 | 5.106 | 0.21366 | 0.83016 | |
| RegionR8 | -0.903 | 5.106 | 0.11101 | 0.61892 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.624 | 5.106 | 0.48424 | 1.00000 | |
| RegenerationR2 | -0.061 | 5.106 | 0.86802 | 1.00000 | |
| RegenerationR3 | 0.541 | 5.106 | 0.16803 | 0.60243 | |
| RegenerationR4 | 0.017 | 5.106 | 0.96412 | 1.00000 | |
| RegenerationR5 | 0.17 | 5.106 | 0.62956 | 0.92240 | |
| RegenerationR6 | 1.084 | 5.106 | 0.00419 | 0.07778 | |
| RegenerationBL | 0.701 | 5.106 | 0.09727 | 0.36605 | |
| RegenerationTP | 0.509 | 5.106 | 0.28335 | 0.73063 |
Genes with expression patterns similar to MligTC455_31565
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31565 | 1493 | 31.1 | Mlig455_021821 | Neo: Neoblast, stringent Age: - |
LNX2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021821 {REF} {Length: 2215} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.1]; RING-type zinc-finger [PF13445.8, score=34.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.9]; Ring finger domain [PF13639.8, score=30.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.7]; U-box domain [PF04564.17, score=23.0]; zinc-RING finger domain [PF14634.8, score=22.1]; RING-H2 zinc finger domain [PF12678.9, score=19.7]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=63.9, Expect=1e-10]} {Mouse: ENSMUSG00000008482, Rnf151, ring finger protein 151, [RH, Score=75.5, Expect=2e-15]} {Dmel: FBgn0265464, Traf6, TNF-receptor-associated factor 6, [Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_6297_0_2, dd_Smed_v6_6297_0_2, [RH, Score=119, Expect=4e-32]} {RNA1509_33996, RNA1509_7107} {RNA1310_11993, RNA1509_33996, RNA1509_7107} {RNA1509_33996, RNA1509_7107, RNA815_4996.1} |
| 2. | MligTC455_43843 | 1915 | 39.89 | Mlig455_054774 | Neo: Int S/G2/M Age: Up-Down-Up |
PSMD14 | 1.724 | - | - | - | 0.962 | 0.762 | - | Mlig455_054774 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=112.1]; Maintenance of mitochondrial structure and function [PF13012.8, score=54.5]; Prokaryotic homologs of the JAB domain [PF14464.8, score=25.7]} {Human: ENSG00000115233, PSMD14, proteasome 26S subunit, non-ATPase 14, [RH, Score=513, Expect=0.0]} {Mouse: ENSMUSG00000026914, Psmd14, proteasome (prosome, macropain) 26S subunit, non-ATPase, 14, [RH, Score=513, Expect=0.0]} {Dmel: FBgn0028694, Rpn11, Regulatory particle non-ATPase 11, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00004467, rpn-11, 26S proteasome non-ATPase regulatory subunit 14, [RH, Score=454, Expect=6e-162]} {Smed: dd_Smed_v6_2126_0_1, dd_Smed_v6_2126_0_1, [RH, Score=520, Expect=0.0]} {RNA1509_2523} {RNA1310_22197.1} {RNA815_10026} |
| 3. | MligTC455_43652 | 2107 | 43.9 | Mlig455_029978 | Neo: - Age: - |
TMOD3 | 1.709 | - | - | 0.758 | 0.951 | - | - | Mlig455_029978 {REF} {Length: 2972} {TRANSSPLICED} {Pfam: Tropomodulin [PF03250.16, score=185.9]} {Human: ENSG00000138594, TMOD3, tropomodulin 3, [RH, Score=224, Expect=4e-70]; ENSG00000128872, TMOD2, tropomodulin 2, [RH, Score=214, Expect=2e-66]} {Mouse: ENSMUSG00000058587, Tmod3, tropomodulin 3, [RH, Score=221, Expect=4e-69]; ENSMUSG00000032186, Tmod2, tropomodulin 2, [RH, Score=213, Expect=4e-66]; ENSMUSG00000028328, Tmod1, tropomodulin 1, [RH, Score=213, Expect=4e-66]} {Dmel: FBgn0082582, tmod, tropomodulin, [RH, Score=273, Expect=1e-87]} {Celegans: WBGene00006823, unc-94, Tropomodulin, [RH, Score=247, Expect=6e-79]} {Smed: dd_Smed_v6_3279_0_1, dd_Smed_v6_3279_0_1, [RH, Score=322, Expect=8e-109]} {RNA1509_1524, RNA1509_29918, RNA1509_52135, RNA1509_7985} {RNA1310_10808.2, RNA1509_29918, RNA1509_52135, RNA1509_7985} {RNA1509_29918, RNA1509_52135, RNA1509_7985, RNA815_3504.1} |
| 4. | MligTC455_28167 | 889 | 18.53 | Mlig455_041562 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.271 Region-enriched R5: 1.459/0.00003 |
DDX60 | 1.661 | - | - | 0.708 | 0.953 | - | - | Mlig455_041562 {REF} {Length: 6838} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=61.6]; Type III restriction enzyme, res subunit [PF04851.17, score=45.6]; Helicase conserved C-terminal domain [PF00271.33, score=33.2]; Zinc finger, ZZ type [PF00569.19, score=25.6]} {Human: ENSG00000137628, DDX60, DExD/H-box helicase 60, [RH, Score=639, Expect=0.0]} {Mouse: ENSMUSG00000037921, Ddx60, DEAD (Asp-Glu-Ala-Asp) box polypeptide 60, [RH, Score=618, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [Score=84.7, Expect=5e-16]} {Celegans: WBGene00016194, C28H8.3, Uncharacterized helicase C28H8.3, [RH, Score=403, Expect=6e-116]} {Smed: dd_Smed_v6_10069_0_1, dd_Smed_v6_10069_0_1, [Score=84.7, Expect=3e-16]} {RNA1509_25102, RNA1509_2815} {RNA1310_707, RNA1509_25102, RNA1509_2815} {RNA1509_25102, RNA1509_2815, RNA815_269.1} |
| 5. | MligTC455_23110 | 1801 | 37.52 | Mlig455_015205 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.104/0.00009 |
EIF4G3 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_015205 {REF} {Length: 5800} {Pfam: MIF4G domain [PF02854.21, score=100.5]; MA3 domain [PF02847.19, score=22.8]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=298, Expect=1e-81]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=290, Expect=4e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=309, Expect=5e-85]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [Score=155, Expect=2e-37]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=208, Expect=7e-59]} {RNA1509_5307, RNA1509_828} {RNA1310_788.1, RNA1509_5307, RNA1509_828} {RNA1509_5307, RNA1509_828, RNA815_583} |
| 6. | MligTC455_36871 | 4132 | 86.08 | Mlig455_061085 | Neo: Irradiation Age: logFC(26M/2M)=0.831 Region-enriched R4: 1.146/0.00083 Regeneration-upregulated BL: 1.165 Regeneration-enriched BL: 1.165 |
H2AFV | 0.961 | - | - | - | 0.961 | - | - | Mlig455_061085 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636} {RNA1310_60280} {RNA815_1839.1} |
| 7. | MligTC455_16347 | 959 | 19.98 | Mlig455_024522 | Neo: Irradiation Age: - Region-specific R4: 2.984 Region-enriched R4: 1.951/0.00070 Regeneration-downregulated R4: -2.100 Regeneration-depleted R4: -2.100 |
SH3KBP1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_024522 {REF} {Length: 2795} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=59.6]; Variant SH3 domain [PF07653.19, score=55.3]; SH3 domain [PF00018.30, score=45.3]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [RH, Score=83.2, Expect=3e-17]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [RH, Score=82.0, Expect=5e-17]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00021549, Y44E3A.4, [Score=70.9, Expect=2e-13]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [Score=101, Expect=5e-24]} {RNA1509_44142} {RNA1310_6551} {RNA815_17932} |
| 8. | MligTC455_47882 | 920 | 19.18 | Mlig455_014428 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.468/0.00366 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_014428 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_12311} {RNA1310_13342} {RNA815_9722.1} | |
| 9. | MligTC455_29329 | 1510 | 31.46 | Mlig455_011494 | Neo: - |
OLA1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_011494 {REF} {Length: 1556} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF933) [PF06071.15, score=132.0]; 50S ribosome-binding GTPase [PF01926.25, score=52.8]; Ferrous iron transport protein B [PF02421.20, score=28.4]} {Human: ENSG00000138430, OLA1, Obg like ATPase 1, [Score=457, Expect=8e-161]} {Mouse: ENSMUSG00000027108, Ola1, Obg-like ATPase 1, [Score=456, Expect=1e-160]} {Dmel: FBgn0030151, CG1354, [Score=477, Expect=6e-169]} {Celegans: WBGene00012344, ola-1, Obg-like ATPase 1, [Score=466, Expect=1e-164]} {Smed: dd_Smed_v6_2199_0_1, dd_Smed_v6_2199_0_1, [Score=481, Expect=8e-171]} {RNA1509_3669} {RNA1310_18424} {RNA815_7325} |
| 10. | MligTC455_36870 | 4127 | 85.99 | Mlig455_035433 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 1.158/0.00049 Regeneration-upregulated BL: 1.133 Regeneration-enriched BL: 1.133 |
H2AFV | 0.956 | - | - | - | 0.956 | - | - | Mlig455_035433 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1310_60280, RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1509_18636, RNA1509_4518, RNA1509_6214, RNA815_1839.1} |
| 11. | MligTC455_42722 | 968 | 20.17 | Mlig455_047964 | Neo: Neoblast Age: Down-Up-Down Regeneration-upregulated BL: 2.079 Regeneration-enriched BL: 2.079 |
BRIX1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_047964 {REF} {Length: 1456} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=103.6]} {Human: ENSG00000113460, BRIX1, BRX1, biogenesis of ribosomes, [RH, Score=267, Expect=3e-87]} {Mouse: ENSMUSG00000022247, Brix1, BRX1, biogenesis of ribosomes, [RH, Score=268, Expect=7e-88]} {Dmel: FBgn0035524, CG11583, [RH, Score=275, Expect=2e-90]} {Celegans: WBGene00019678, K12H4.3, Ribosome biogenesis protein BRX1 homolog, [RH, Score=248, Expect=3e-80]} {Smed: dd_Smed_v6_4683_0_1, dd_Smed_v6_4683_0_1, [RH, Score=223, Expect=3e-71]} {RNA1509_21746, RNA1509_35345, RNA1509_6627} {RNA1310_20895, RNA1509_21746, RNA1509_35345, RNA1509_6627} {RNA1509_21746, RNA1509_35345, RNA1509_6627, RNA815_9366} |
| 12. | MligTC455_22060 | 414 | 8.63 | Mlig455_070899 | Neo: Irradiation Age: Down-Up-Up |
ZFHX4 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_070899 {REF} {Length: 5905} {Pfam: C2H2 type zinc-finger [PF18414.3, score=27.0]; Zinc-finger of C2H2 type [PF12874.9, score=24.8]; Zinc finger, C2H2 type [PF00096.28, score=23.3]; C2H2-type zinc-finger domain [PF13909.8, score=21.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.4]} {Human: ENSG00000091656, ZFHX4, zinc finger homeobox 4, [RH, Score=202, Expect=2e-51]} {Mouse: ENSMUSG00000025255, Zfhx4, zinc finger homeodomain 4, [RH, Score=201, Expect=2e-51]} {Dmel: FBgn0004607, zfh2, Zn finger homeodomain 2, [RH, Score=164, Expect=2e-40]} {Celegans: WBGene00022518, zfh-2, Zinc Finger and Homeobox, [RH, Score=197, Expect=9e-51]} {Smed: dd_Smed_v6_7033_0_1, dd_Smed_v6_7033_0_1, [Score=139, Expect=4e-33]} {RNA1509_19849} {RNA1310_31042} {RNA815_20239} |
| 13. | MligTC455_33730 | 2098 | 43.7 | Mlig455_030553, Mlig455_042057 | Neo: - Age: logFC(26M/2M)=0.434 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_030553 {REF} {Length: 3489} {TRANSSPLICED} {RNA1509_15458, RNA1509_16674, RNA1509_2103, RNA1509_24573, RNA1509_28605, RNA1509_4660} {RNA1310_21190.1, RNA1509_15458, RNA1509_16674, RNA1509_2103, RNA1509_24573, RNA1509_28605, RNA1509_4660} {RNA1509_15458, RNA1509_16674, RNA1509_2103, RNA1509_24573, RNA1509_28605, RNA1509_4660, RNA815_11189} Mlig455_042057 {REF} {Length: 487} {NoTransDecoderORF} {RNA1509_54995} {RNA1310_104311} |
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