TomoSeq data search

Data search

Results for MligTC455_31599

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31599

6

0.12

Mlig455_051208

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.992

DNM1

Mlig455_051208 {REF} {Length: 3195} {Pfam: Dynamin central region [PF01031.22, score=339.1]; Dynamin family [PF00350.25, score=186.0]; Dynamin GTPase effector domain [PF02212.20, score=82.9]; PH domain [PF00169.31, score=39.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000106976, DNM1, dynamin 1, [RH, Score=1121, Expect=0.0]; ENSG00000197959, DNM3, dynamin 3, [RH, Score=1100, Expect=0.0]; ENSG00000079805, DNM2, dynamin 2, [RH, Score=1085, Expect=0.0]} {Mouse: ENSMUSG00000026825, Dnm1, dynamin 1, [RH, Score=1119, Expect=0.0]; ENSMUSG00000040265, Dnm3, dynamin 3, [RH, Score=1098, Expect=0.0]; ENSMUSG00000033335, Dnm2, dynamin 2, [RH, Score=1084, Expect=0.0]} {Dmel: FBgn0003392, shi, shibire, [RH, Score=1054, Expect=0.0]} {Celegans: WBGene00001130, dyn-1, Dynamin, [RH, Score=997, Expect=0.0]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [RH, Score=1078, Expect=0.0]} {RNA1509_19776} {RNA1310_1586.1} {RNA815_6662.1}

Cumulative graph for MligTC455_31599

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_31599

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31599	6	0.12	Mlig455_051208	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.992	DNM1	2	-	-	-	-	1.000	1.000	Mlig455_051208 {REF} {Length: 3195} {Pfam: Dynamin central region [PF01031.22, score=339.1]; Dynamin family [PF00350.25, score=186.0]; Dynamin GTPase effector domain [PF02212.20, score=82.9]; PH domain [PF00169.31, score=39.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000106976, DNM1, dynamin 1, [RH, Score=1121, Expect=0.0]; ENSG00000197959, DNM3, dynamin 3, [RH, Score=1100, Expect=0.0]; ENSG00000079805, DNM2, dynamin 2, [RH, Score=1085, Expect=0.0]} {Mouse: ENSMUSG00000026825, Dnm1, dynamin 1, [RH, Score=1119, Expect=0.0]; ENSMUSG00000040265, Dnm3, dynamin 3, [RH, Score=1098, Expect=0.0]; ENSMUSG00000033335, Dnm2, dynamin 2, [RH, Score=1084, Expect=0.0]} {Dmel: FBgn0003392, shi, shibire, [RH, Score=1054, Expect=0.0]} {Celegans: WBGene00001130, dyn-1, Dynamin, [RH, Score=997, Expect=0.0]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [RH, Score=1078, Expect=0.0]} {RNA1509_19776} {RNA1310_1586.1} {RNA815_6662.1}
2.	MligTC455_21619	8	0.16	Mlig455_044119	Neo: - Age: -		0.995	-	-	-	-	0.995	-	Mlig455_044119 {REF} {Length: 919} {NoTransDecoderORF} {RNA1509_49326} {RNA1310_50572.1} {RNA815_53737}
3.	MligTC455_35959	50	1.04	Mlig455_026640	Neo: - Age: -		0.985	-	-	-	-	0.985	-	Mlig455_026640 {REF} {Length: 147} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_65893} {RNA815_64258}
4.	MligTC455_09539	7	0.14	Mlig455_018600	Neo: - Age: -	TNN	0.959	-	-	-	-	0.959	-	Mlig455_018600 {REF} {Length: 947} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=121.5]} {Human: ENSG00000120332, TNN, tenascin N, [Score=100, Expect=3e-24]; ENSG00000041982, TNC, tenascin C, [Score=100, Expect=6e-24]; ENSG00000116147, TNR, tenascin R, [Score=98.6, Expect=2e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=104, Expect=9e-26]; ENSMUSG00000028364, Tnc, tenascin C, [Score=101, Expect=2e-24]; ENSMUSG00000015829, Tnr, tenascin R, [Score=99.4, Expect=7e-24]} {Dmel: FBgn0034160, CG5550, [Score=87.8, Expect=4e-21]} {RNA1310_149069} {RNA815_40596}
5.	MligTC455_10279	6	0.13	Mlig455_048696	Neo: - Age: -	ANK3	0.954	-	-	-	-	0.954	-	Mlig455_048696 {REF} {Length: 4169} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=217.0]; Ankyrin repeats (many copies) [PF13637.8, score=170.5]; Ankyrin repeat [PF00023.32, score=164.6]; Ankyrin repeat [PF13606.8, score=140.4]; Ankyrin repeats (many copies) [PF13857.8, score=123.4]; THAP domain [PF05485.14, score=63.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=196, Expect=5e-50]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=197, Expect=1e-50]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=182, Expect=6e-46]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=2e-41]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=165, Expect=6e-41]} {RNA1509_42327} {RNA1310_55652} {RNA815_53468}
6.	MligTC455_24773	3	0.07	Mlig455_040219	Neo: - Age: Up-Down-Down	SOS1	0.954	-	-	-	-	0.954	-	Mlig455_040219 {REF} {Length: 5297} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.9]; RasGEF N-terminal motif [PF00618.22, score=76.7]; RhoGEF domain [PF00621.22, score=25.9]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=247, Expect=7e-66]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=240, Expect=1e-63]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=253, Expect=4e-68]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=223, Expect=2e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=212, Expect=3e-55]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=195, Expect=4e-50]} {RNA1509_9358} {RNA1310_1170.1} {RNA815_4025}
7.	MligTC455_46585	37	0.76	Mlig455_014468	Neo: - Age: -	FOXL1	0.954	-	-	-	-	0.954	-	Mlig455_014468 {REF} {Length: 1626} {Pfam: Forkhead domain [PF00250.20, score=137.2]} {Human: ENSG00000176678, FOXL1, forkhead box L1, [Score=182, Expect=5e-55]} {Mouse: ENSMUSG00000097084, Foxl1, forkhead box L1, [Score=187, Expect=2e-57]} {Dmel: FBgn0014143, croc, crocodile, [Score=152, Expect=3e-42]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=145, Expect=2e-40]} {Smed: dd_Smed_v6_19255_0_1, dd_Smed_v6_19255_0_1, [Score=175, Expect=2e-53]} {RNA1310_141907} {RNA815_63830}

Berezikov Lab - 2020-2021 © ERIBA