TomoSeq data search

Data search

Results for MligTC455_24773

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24773

3

0.07

Mlig455_040219

Neo: -

Age: Up-Down-Down

SOS1

Mlig455_040219 {REF} {Length: 5297} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.9]; RasGEF N-terminal motif [PF00618.22, score=76.7]; RhoGEF domain [PF00621.22, score=25.9]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=247, Expect=7e-66]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=240, Expect=1e-63]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=253, Expect=4e-68]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=223, Expect=2e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=212, Expect=3e-55]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=195, Expect=4e-50]} {RNA1509_9358} {RNA1310_1170.1} {RNA815_4025}

Cumulative graph for MligTC455_24773

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_24773

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10279	6	0.13	Mlig455_048696	Neo: - Age: -	ANK3	1	-	-	-	-	1.000	-	Mlig455_048696 {REF} {Length: 4169} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=217.0]; Ankyrin repeats (many copies) [PF13637.8, score=170.5]; Ankyrin repeat [PF00023.32, score=164.6]; Ankyrin repeat [PF13606.8, score=140.4]; Ankyrin repeats (many copies) [PF13857.8, score=123.4]; THAP domain [PF05485.14, score=63.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=196, Expect=5e-50]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=197, Expect=1e-50]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=182, Expect=6e-46]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=2e-41]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=165, Expect=6e-41]} {RNA1509_42327} {RNA1310_55652} {RNA815_53468}
2.	MligTC455_24773	3	0.07	Mlig455_040219	Neo: - Age: Up-Down-Down	SOS1	1	-	-	-	-	1.000	-	Mlig455_040219 {REF} {Length: 5297} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.9]; RasGEF N-terminal motif [PF00618.22, score=76.7]; RhoGEF domain [PF00621.22, score=25.9]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=247, Expect=7e-66]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=240, Expect=1e-63]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=253, Expect=4e-68]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=223, Expect=2e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=212, Expect=3e-55]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=195, Expect=4e-50]} {RNA1509_9358} {RNA1310_1170.1} {RNA815_4025}
3.	MligTC455_48784	32	0.67	Mlig455_045131	Neo: - Age: Up-Down-Up Regeneration-enriched R3: 7.044 Regeneration-enriched R5: 6.183	DCAF7	0.996	-	-	-	-	0.996	-	Mlig455_045131 {REF} {Length: 2344} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=26.2]} {Human: ENSG00000136485, DCAF7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000049354, Dcaf7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Dmel: FBgn0266848, wap, wings apart, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00009976, swan-2, Seven WD repeats, AN11 family, [RH, Score=471, Expect=1e-165]} {Smed: dd_Smed_v6_3579_0_1, dd_Smed_v6_3579_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_46682} {RNA1310_11837, RNA1509_46682} {RNA1509_46682, RNA815_37344}
4.	MligTC455_10502	4	0.08	Mlig455_007277	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.667	PLSCR1	0.987	-	-	-	-	0.987	-	Mlig455_007277 {REF} {Length: 2251} {TRANSSPLICED} {Pfam: Scramblase [PF03803.17, score=280.5]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [RH, Score=261, Expect=7e-86]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [RH, Score=249, Expect=3e-81]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [RH, Score=248, Expect=4e-81]} {Dmel: FBgn0052056, scramb1, scramblase 1, [RH, Score=242, Expect=1e-77]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [RH, Score=237, Expect=4e-77]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [RH, Score=387, Expect=3e-136]} {RNA1509_40262} {RNA1310_18353.1, RNA1509_40262} {RNA1509_40262, RNA815_17963.1}
5.	MligTC455_07223	16	0.33	Mlig455_005397, Mlig455_046574, Mlig455_067813	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_005397 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_63361.1} {RNA815_37775} Mlig455_046574 {REF} {Length: 115} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_76661} {RNA815_37775} Mlig455_067813 {REF} {Length: 129} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_63361.1} {RNA815_37775}
6.	MligTC455_10419	3	0.06	Mlig455_002299	Neo: - Age: -		0.978	-	-	-	-	0.978	-	Mlig455_002299 {REF} {Length: 3216} {Pfam: Cysteine rich repeat [PF02363.21, score=19.0]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=59.7, Expect=8e-10]} {Celegans: WBGene00018026, F35A5.4, [Score=62.0, Expect=7e-11]} {RNA1509_34741, RNA1509_50790} {RNA1310_31251, RNA1509_50790} {RNA1509_50790, RNA815_14258}
7.	MligTC455_09539	7	0.14	Mlig455_018600	Neo: - Age: -	TNN	0.976	-	-	-	-	0.976	-	Mlig455_018600 {REF} {Length: 947} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=121.5]} {Human: ENSG00000120332, TNN, tenascin N, [Score=100, Expect=3e-24]; ENSG00000041982, TNC, tenascin C, [Score=100, Expect=6e-24]; ENSG00000116147, TNR, tenascin R, [Score=98.6, Expect=2e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=104, Expect=9e-26]; ENSMUSG00000028364, Tnc, tenascin C, [Score=101, Expect=2e-24]; ENSMUSG00000015829, Tnr, tenascin R, [Score=99.4, Expect=7e-24]} {Dmel: FBgn0034160, CG5550, [Score=87.8, Expect=4e-21]} {RNA1310_149069} {RNA815_40596}
8.	MligTC455_35959	50	1.04	Mlig455_026640	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_026640 {REF} {Length: 147} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_65893} {RNA815_64258}
9.	MligTC455_12790	14	0.28	Mlig455_018710, Mlig455_018746, Mlig455_018914	Neo: - Age: - Regeneration-enriched R3: 8.221 Regeneration-enriched R5: 5.165		0.974	-	-	-	-	0.974	-	Mlig455_018710 {REF} {Length: 435} Mlig455_018746 {REF} {Length: 391} {RNA1310_101839} {RNA815_52263} Mlig455_018914 {REF} {Length: 552}
10.	MligTC455_37196	41	0.85	Mlig455_050488	Neo: - Age: - Region-enriched R4: 5.002/0.01104		0.972	-	-	-	-	0.972	-	Mlig455_050488 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19236} {RNA1310_67447} {RNA815_54054}
11.	MligTC455_11817	9	0.19	Mlig455_024115, Mlig455_055876	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_024115 {REF} {Length: 716} {NoTransDecoderORF} {RNA1310_55470.2} {RNA815_61103} Mlig455_055876 {REF} {Length: 652} {NoTransDecoderORF} {RNA1509_41695} {RNA1310_55470.1} {RNA815_61103}
12.	MligTC455_21619	8	0.16	Mlig455_044119	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_044119 {REF} {Length: 919} {NoTransDecoderORF} {RNA1509_49326} {RNA1310_50572.1} {RNA815_53737}
13.	MligTC455_31599	6	0.12	Mlig455_051208	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.992	DNM1	0.954	-	-	-	-	0.954	-	Mlig455_051208 {REF} {Length: 3195} {Pfam: Dynamin central region [PF01031.22, score=339.1]; Dynamin family [PF00350.25, score=186.0]; Dynamin GTPase effector domain [PF02212.20, score=82.9]; PH domain [PF00169.31, score=39.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000106976, DNM1, dynamin 1, [RH, Score=1121, Expect=0.0]; ENSG00000197959, DNM3, dynamin 3, [RH, Score=1100, Expect=0.0]; ENSG00000079805, DNM2, dynamin 2, [RH, Score=1085, Expect=0.0]} {Mouse: ENSMUSG00000026825, Dnm1, dynamin 1, [RH, Score=1119, Expect=0.0]; ENSMUSG00000040265, Dnm3, dynamin 3, [RH, Score=1098, Expect=0.0]; ENSMUSG00000033335, Dnm2, dynamin 2, [RH, Score=1084, Expect=0.0]} {Dmel: FBgn0003392, shi, shibire, [RH, Score=1054, Expect=0.0]} {Celegans: WBGene00001130, dyn-1, Dynamin, [RH, Score=997, Expect=0.0]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [RH, Score=1078, Expect=0.0]} {RNA1509_19776} {RNA1310_1586.1} {RNA815_6662.1}
14.	MligTC455_12275	55	1.15	Mlig455_044441	Neo: - Age: -	FGL1	0.953	-	-	-	-	0.953	-	Mlig455_044441 {REF} {Length: 1471} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=108.4]} {Human: ENSG00000104760, FGL1, fibrinogen like 1, [Score=84.7, Expect=3e-18]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=83.2, Expect=5e-17]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=80.9, Expect=2e-16]} {Mouse: ENSMUSG00000031594, Fgl1, fibrinogen-like protein 1, [Score=85.5, Expect=1e-18]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=82.0, Expect=5e-17]} {Dmel: FBgn0033312, CG8642, [Score=76.3, Expect=3e-15]} {Celegans: WBGene00017013, ensh-1, [Score=51.6, Expect=3e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=75.5, Expect=4e-15]} {RNA1310_40379} {RNA815_26634}

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