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Results for MligTC455_31662

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31662	10	0.21	Mlig455_018237, Mlig455_036222, Mlig455_057518	Neo: - Age: -	NYNRIN	Mlig455_018237 {REF} {Length: 4234} {Pfam: Integrase core domain [PF00665.28, score=49.5]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=68.2, Expect=2e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1} Mlig455_036222 {REF} {Length: 1799} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.3]; Integrase core domain [PF00665.28, score=49.1]; Integrase core domain [PF13683.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=107, Expect=9e-26]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1} Mlig455_057518 {REF} {Length: 680} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.2]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=5e-31]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31662

0.21

Mlig455_018237, Mlig455_036222, Mlig455_057518

Neo: -

Age: -

NYNRIN

Mlig455_018237 {REF} {Length: 4234} {Pfam: Integrase core domain [PF00665.28, score=49.5]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=68.2, Expect=2e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_036222 {REF} {Length: 1799} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.3]; Integrase core domain [PF00665.28, score=49.1]; Integrase core domain [PF13683.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=107, Expect=9e-26]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1}

Mlig455_057518 {REF} {Length: 680} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.2]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=5e-31]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1}

Cumulative graph for MligTC455_31662

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_31662

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31662	10	0.21	Mlig455_018237, Mlig455_036222, Mlig455_057518	Neo: - Age: -	NYNRIN	1	-	-	-	-	1.000	-	Mlig455_018237 {REF} {Length: 4234} {Pfam: Integrase core domain [PF00665.28, score=49.5]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=68.2, Expect=2e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1} Mlig455_036222 {REF} {Length: 1799} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.3]; Integrase core domain [PF00665.28, score=49.1]; Integrase core domain [PF13683.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=107, Expect=9e-26]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1} Mlig455_057518 {REF} {Length: 680} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.2]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=5e-31]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1}
2.	MligTC455_31771	49	1.02	Mlig455_026245	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.686	TRIM2	0.965	-	-	-	-	0.965	-	Mlig455_026245 {REF} {Length: 1670} {Pfam: NHL repeat [PF01436.23, score=31.4]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=5e-08]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=57.0, Expect=3e-08]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=55.1, Expect=1e-07]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
3.	MligTC455_13041	15	0.3	Mlig455_041814	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_041814 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_42220} {RNA815_52710}
4.	MligTC455_37222	36	0.76	Mlig455_053487	Neo: - Age: Up-Down-Down	AFDN	0.953	-	-	-	-	0.953	-	Mlig455_053487 {REF} {Length: 6491} {TRANSSPLICED} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=108.6]; DIL domain [PF01843.21, score=81.7]; PDZ domain [PF00595.26, score=45.4]; PDZ domain [PF17820.3, score=31.5]; FHA domain [PF00498.28, score=25.3]} {Human: ENSG00000130396, AFDN, afadin, adherens junction formation factor, [RH, Score=370, Expect=4e-103]} {Mouse: ENSMUSG00000068036, Afdn, afadin, adherens junction formation factor, [RH, Score=373, Expect=2e-104]} {Dmel: FBgn0259212, cno, canoe, [RH, Score=394, Expect=5e-111]} {Celegans: WBGene00021009, afd-1, AFaDin (Actin filament binding protein) homolog, [RH, Score=239, Expect=1e-63]} {Smed: dd_Smed_v6_7215_0_1, dd_Smed_v6_7215_0_1, [RH, Score=507, Expect=9e-149]} {RNA1509_46128, RNA1509_8828} {RNA1310_583.1, RNA1509_46128, RNA1509_8828} {RNA1509_46128, RNA1509_8828, RNA815_5511}
5.	MligTC455_50134	108	2.26	Mlig455_058061	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_058061 {REF} {Length: 2026} {RNA1509_11387} {RNA1310_15929.1} {RNA815_15301.1}
6.	MligTC455_01710	41	0.85	Mlig455_013827	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_013827 {REF} {Length: 2546} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=29.2]} {RNA1310_100507} {RNA815_49026}