Data search
Results for MligTC455_13041
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13041 | 15 | 0.30 | Mlig455_041814 | Neo: - Age: - |
Mlig455_041814 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_42220} {RNA815_52710} |
Cumulative graph for MligTC455_13041
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_13041
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13041 | 15 | 0.3 | Mlig455_041814 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_041814 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_42220} {RNA815_52710} | |
| 2. | MligTC455_42364 | 9 | 0.2 | Mlig455_007252 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_007252 {REF} {Length: 523} {RNA1509_2515} {RNA1310_11307} {RNA815_3258.1} | |
| 3. | MligTC455_09966 | 13 | 0.27 | Mlig455_037956 | Neo: - Age: - |
COL4A1 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_037956 {REF} {Length: 1183} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=52.1]} {Human: ENSG00000187498, COL4A1, collagen type IV alpha 1 chain, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000031502, Col4a1, collagen, type IV, alpha 1, [Score=62.4, Expect=5e-11]; ENSMUSG00000026390, Marco, macrophage receptor with collagenous structure, [Score=61.6, Expect=8e-11]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=61.2, Expect=1e-10]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=67.0, Expect=8e-13]} {Smed: dd_Smed_v6_2197_0_1, dd_Smed_v6_2197_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_35905} {RNA815_18113} |
| 4. | MligTC455_25052 | 180 | 3.74 | Mlig455_029793 | Neo: - Age: Up-Down-Down |
HERC2 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_029793 {REF} {Length: 16855} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=518.2]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=184.0]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=180.6]; Mib_herc2 [PF06701.15, score=64.9]; Mouse development and cellular proliferation protein Cullin-7 [PF11515.10, score=63.4]; Zinc finger, ZZ type [PF00569.19, score=26.4]; Cytochrome b5-like Heme/Steroid binding domain [PF00173.30, score=23.5]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2195, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=2200, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1271, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=3e-26]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1098, Expect=0.0]} {RNA1509_2217, RNA1509_26920} {RNA1310_95.1, RNA1509_2217, RNA1509_26920} {RNA1509_2217, RNA1509_26920, RNA815_620} |
| 5. | MligTC455_31662 | 10 | 0.21 | Mlig455_018237, Mlig455_036222, Mlig455_057518 | Neo: - Age: - |
NYNRIN | 0.954 | - | - | - | - | 0.954 | - | Mlig455_018237 {REF} {Length: 4234} {Pfam: Integrase core domain [PF00665.28, score=49.5]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=68.2, Expect=2e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1} Mlig455_036222 {REF} {Length: 1799} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.3]; Integrase core domain [PF00665.28, score=49.1]; Integrase core domain [PF13683.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=107, Expect=9e-26]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1} Mlig455_057518 {REF} {Length: 680} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=67.2]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=5e-31]} {RNA1509_18367} {RNA1310_1117.2} {RNA815_895.1} |
| 6. | MligTC455_34024 | 339 | 7.06 | Mlig455_055755 | Neo: - Age: - Region-enriched R5: 1.899/0.00004 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_055755 {REF} {Length: 2298} {TRANSSPLICED} {RNA1509_38778} {RNA1310_16573, RNA1509_38778} {RNA1509_38778, RNA815_17823} |