Data search
Results for MligTC455_31777
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31777 | 109 | 2.27 | Mlig455_043193 | Neo: - Age: logFC(26M/2M)=-0.597 |
TRIM3 | Mlig455_043193 {REF} {Length: 1930} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=38.6]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=67.0, Expect=5e-11]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=67.0, Expect=3e-11]} {Celegans: WBGene00003026, lin-41, [Score=50.4, Expect=3e-06]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
Cumulative graph for MligTC455_31777
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.256 | 2.053 | 0.89468 | 1.00000 | |
| RegionR2 | -0.261 | 2.053 | 0.87082 | 1.00000 | |
| RegionR3 | 1.33 | 2.053 | 0.14647 | 0.65110 | |
| RegionR4 | 1.712 | 2.053 | 0.07332 | 0.24997 | |
| RegionR5 | 1.354 | 2.053 | 0.11385 | 0.33354 | |
| RegionR6 | -0.363 | 2.053 | 0.90486 | 1.00000 | |
| RegionR7 | -4.271 | 2.053 | 0.11728 | 0.64702 | |
| RegionR8 | 0.755 | 2.053 | 0.55663 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.351 | 2.053 | 0.50917 | 1.00000 | |
| RegenerationR2 | 2.066 | 2.053 | 0.01762 | 0.21798 | |
| RegenerationR3 | 0.635 | 2.053 | 0.48396 | 0.85214 | |
| RegenerationR4 | 0.526 | 2.053 | 0.57132 | 0.90196 | |
| RegenerationR5 | 0.851 | 2.053 | 0.29547 | 0.72278 | |
| RegenerationR6 | 2.027 | 2.053 | 0.06295 | 0.31510 | |
| RegenerationBL | 2.216 | 2.053 | 0.13596 | 0.43938 | |
| RegenerationTP | 2.59 | 2.053 | 0.15944 | 0.58729 |
Genes with expression patterns similar to MligTC455_31777
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31777 | 109 | 2.27 | Mlig455_043193 | Neo: - Age: logFC(26M/2M)=-0.597 |
TRIM3 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_043193 {REF} {Length: 1930} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=38.6]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=67.0, Expect=5e-11]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.9, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=67.0, Expect=3e-11]} {Celegans: WBGene00003026, lin-41, [Score=50.4, Expect=3e-06]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
| 2. | MligTC455_42433 | 296 | 6.16 | Mlig455_042531 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_042531 {REF} {Length: 2044} {NoTransDecoderORF} {RNA1509_29193} {RNA1310_29561} {RNA815_12247.1} | |
| 3. | MligTC455_42434 | 267 | 5.57 | Mlig455_042541 | Neo: - Age: Up-Down-Up |
TESK1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_042541 {REF} {Length: 3477} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=150.8]; Protein kinase domain [PF00069.27, score=126.5]; Phosphotransferase enzyme family [PF01636.25, score=23.5]; Fungal protein kinase [PF17667.3, score=21.9]} {Human: ENSG00000107140, TESK1, testis associated actin remodelling kinase 1, [RH, Score=268, Expect=6e-82]; ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [RH, Score=256, Expect=8e-78]} {Mouse: ENSMUSG00000028458, Tesk1, testis specific protein kinase 1, [RH, Score=268, Expect=6e-82]; ENSMUSG00000033985, Tesk2, testis-specific kinase 2, [RH, Score=259, Expect=4e-79]} {Dmel: FBgn0004876, cdi, center divider, [RH, Score=250, Expect=2e-72]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=103, Expect=4e-23]} {Smed: dd_Smed_v6_4373_0_1, dd_Smed_v6_4373_0_1, [RH, Score=168, Expect=2e-46]} {RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831} {RNA1310_18795, RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831} {RNA1509_27096, RNA1509_29631, RNA1509_47905, RNA1509_57831, RNA815_12247.1} |
| 4. | MligTC455_19226 | 225 | 4.7 | Mlig455_044480 | Neo: - Age: - |
SMARCC2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_044480 {REF} {Length: 4043} {Pfam: SWIRM domain [PF04433.19, score=71.7]; SWIRM-associated region 1 [PF16495.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=40.4]; Myb-like DNA-binding domain [PF13921.8, score=19.6]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=193, Expect=3e-50]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=192, Expect=5e-50]; ENSMUSG00000032481, Smarcc1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1, [Score=183, Expect=4e-47]} {Dmel: FBgn0002783, mor, moira, [Score=176, Expect=5e-45]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=224, Expect=6e-62]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=193, Expect=1e-50]} {RNA1509_21623} {RNA1310_9539.1} {RNA815_24164} |
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