Data search


search
Exact
Search

Results for MligTC455_31843

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31843 85 1.78 Mlig455_009356, Mlig455_021096

Neo: -

Age: -

Mlig455_009356 {REF} {Length: 3278} {RNA1509_19124} {RNA1310_1437} {RNA815_889}

Mlig455_021096 {REF} {Length: 3285} {TRANSSPLICED} {RNA1509_19124} {RNA1310_1437} {RNA815_889}

Cumulative graph for MligTC455_31843

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.138 1.779 0.99364 1.00000
RegionR2 1.246 1.779 0.38403 0.77893
RegionR3 0.841 1.779 0.44624 0.95960
RegionR4 0.555 1.779 0.61537 0.92610
RegionR5 -0.372 1.779 0.91759 1.00000
RegionR6 -0.08 1.779 0.84537 1.00000
RegionR7 2.222 1.779 0.10319 0.61155
RegionR8 -3.274 1.779 0.41073 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.866 1.779 0.74514 1.00000
RegenerationR2 0.509 1.779 0.57738 0.90562
RegenerationR3 -0.539 1.779 0.62320 0.91757
RegenerationR4 -0.552 1.779 0.64664 0.93150
RegenerationR5 -0.04 1.779 0.97584 1.00000
RegenerationR6 1.772 1.779 0.12451 0.43367
RegenerationBL 2.888 1.779 0.05572 0.27339
RegenerationTP -0.425 1.779 0.85539 1.00000


Genes with expression patterns similar to MligTC455_31843

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31843 85 1.78 Mlig455_009356, Mlig455_021096

Neo: -

Age: -

5 1.000 1.000 1.000 1.000 1.000 -

Mlig455_009356 {REF} {Length: 3278} {RNA1509_19124} {RNA1310_1437} {RNA815_889}

Mlig455_021096 {REF} {Length: 3285} {TRANSSPLICED} {RNA1509_19124} {RNA1310_1437} {RNA815_889}
2. MligTC455_31844 80 1.67 Mlig455_053982, Mlig455_054057

Neo: Int S/G2/M

Age: Down-Up-Down

2.82 0.930 - - 0.921 0.969 -

Mlig455_053982 {REF} {Length: 5286} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=36.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=23.2]} {RNA1509_19124} {RNA1310_1002.1} {RNA815_889}

Mlig455_054057 {REF} {Length: 4109} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=31.2]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=19.2]} {RNA1509_19124} {RNA1310_1437} {RNA815_889}
3. MligTC455_06472 436 9.09 Mlig455_004292, Mlig455_004367

Neo: -

Age: Up-Down-Up

Region-enriched R4: 1.429/0.04647

2.562 - - 0.839 0.953 0.770 -

Mlig455_004292 {REF} {Length: 2996} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF00047.27, score=24.0]; Immunoglobulin domain [PF13927.8, score=20.4]} {RNA1509_50458} {RNA1310_23534, RNA1509_50458} {RNA1509_50458, RNA815_16035}

Mlig455_004367 {REF} {Length: 3021} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF00047.27, score=24.0]; Immunoglobulin domain [PF13927.8, score=20.4]} {RNA1509_50458} {RNA1310_23534} {RNA815_16035}
4. MligTC455_22713 787 16.4 Mlig455_023280

Neo: -

Age: -

1.834 - - 0.884 - 0.950 - Mlig455_023280 {REF} {Length: 2898} {RNA1509_17376} {RNA1310_6954} {RNA815_8376.1}
5. MligTC455_46443 78 1.62 Mlig455_033735

Neo: -

Age: -

1.781 - - - 0.820 0.961 - Mlig455_033735 {REF} {Length: 1223} {RNA1509_54569} {RNA1310_22104} {RNA815_10296}
6. MligTC455_18406 313 6.52 Mlig455_007637

Neo: -

Age: -

SPTBN1 1.776 - - 0.952 - 0.824 - Mlig455_007637 {REF} {Length: 13056} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=504.9]; Calponin homology (CH) domain [PF00307.33, score=109.7]; SH3 domain [PF00018.30, score=32.9]; Variant SH3 domain [PF14604.8, score=32.1]; PH domain [PF00169.31, score=28.7]; CAMSAP CH domain [PF11971.10, score=24.6]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=433, Expect=3e-121]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=434, Expect=6e-122]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=405, Expect=4e-113]} {Celegans: WBGene00004855, sma-1, Beta chain spectrin homolog Sma1; SMAll, [RH, Score=467, Expect=3e-131]} {Smed: dd_Smed_v6_2514_0_1, dd_Smed_v6_2514_0_1, [RH, Score=960, Expect=0.0]} {RNA1509_3604} {RNA1310_57.1} {RNA815_21.1}
7. MligTC455_44986 2417 50.36 Mlig455_002882

Neo: -

Age: logFC(26M/2M)=-0.453

1.744 - - 0.952 - 0.792 - Mlig455_002882 {REF} {Length: 1187} {RNA1509_10653, RNA1509_6260} {RNA1310_22176, RNA1509_10653, RNA1509_6260} {RNA1509_10653, RNA1509_6260, RNA815_9068}
8. MligTC455_19085 95 1.98 Mlig455_021540

Neo: -

Age: -

1.729 - - 0.956 - 0.773 - Mlig455_021540 {REF} {Length: 2045} {RNA1509_39251} {RNA1310_9860} {RNA815_3403}
9. MligTC455_22819 5606 116.79 Mlig455_001625

Neo: -

Age: Down-Up-Up

DYNLRB2 1.722 - - 0.772 - 0.950 - Mlig455_001625 {REF} {Length: 631} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=87.5]} {Human: ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=2e-41]} {Dmel: FBgn0024196, robl, roadblock, [Score=133, Expect=6e-42]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=97.8, Expect=4e-28]} {Smed: dd_Smed_v6_1126_0_1, dd_Smed_v6_1126_0_1, [RH, Score=145, Expect=4e-47]} {RNA1509_6058, RNA1509_6997, RNA1509_7350} {RNA1310_20264.2, RNA1509_6058, RNA1509_6997, RNA1509_7350} {RNA1509_6058, RNA1509_6997, RNA1509_7350, RNA815_28390}
10. MligTC455_42168 60 1.25 Mlig455_057478

Neo: -

Age: -

Region-enriched R4: 4.250/0.01400

0.969 - - 0.969 - - - Mlig455_057478 {REF} {Length: 770} {NoTransDecoderORF} {RNA1509_9323} {RNA1310_4491.2} {RNA815_1092}
11. MligTC455_31842 36 0.75 Mlig455_010461

Neo: -

Age: -

0.968 - - - - 0.968 - Mlig455_010461 {REF} {Length: 3344} {TRANSSPLICED} {RNA1509_19124} {RNA1310_1437} {RNA815_889}
12. MligTC455_39418 105 2.19 Mlig455_060584

Neo: -

Age: logFC(26M/2M)=-0.365

0.965 - - 0.965 - - - Mlig455_060584 {REF} {Length: 2959} {RNA1509_1853, RNA1509_19407} {RNA1310_3937, RNA1509_1853, RNA1509_19407} {RNA1509_1853, RNA1509_19407, RNA815_2591.1}
13. MligTC455_44070 1172 24.41 Mlig455_013674, Mlig455_013682, Mlig455_013691

Neo: -

Age: logFC(26M/2M)=-0.325

CASKIN1 0.965 - - 0.965 - - -

Mlig455_013674 {REF} {Length: 3260} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=71.4]; SAM domain (Sterile alpha motif) [PF07647.19, score=60.8]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=6e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=103, Expect=3e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=142, Expect=4e-35]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013682 {REF} {Length: 4028} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=4e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=6e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=153, Expect=3e-38]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013691 {REF} {Length: 4523} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=9e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=8e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=146, Expect=6e-36]} {RNA1509_15754, RNA1509_52244} {RNA1310_14106, RNA1509_52244} {RNA1509_52244, RNA815_1106}
14. MligTC455_45253 300 6.25 Mlig455_023957

Neo: -

Age: -

TTC28 0.965 - - - - 0.965 - Mlig455_023957 {REF} {Length: 7725} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=222.8]; Tetratricopeptide repeat [PF13176.8, score=159.2]; Tetratricopeptide repeat [PF00515.30, score=149.5]; CHAT domain [PF12770.9, score=142.5]; Tetratricopeptide repeat [PF07719.19, score=95.3]; Tetratricopeptide repeat [PF13181.8, score=73.0]; Tetratricopeptide repeat [PF13374.8, score=35.7]; MalT-like TPR region [PF17874.3, score=27.5]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=20.1]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [RH, Score=920, Expect=0.0]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [RH, Score=1106, Expect=0.0]} {Dmel: FBgn0262719, CG43163, [RH, Score=752, Expect=0.0]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [Score=62.0, Expect=4e-09]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [Score=99.8, Expect=7e-21]} {RNA1509_7377} {RNA1310_1046.2} {RNA815_5140}
15. MligTC455_15408 207 4.32 Mlig455_009996, Mlig455_049846, Mlig455_049894

Neo: -

Age: Down-Up-Down

0.964 - - 0.964 - - -

Mlig455_009996 {REF} {Length: 771} {RNA1310_39325} {RNA815_18022}

Mlig455_049846 {REF} {Length: 775} {RNA1310_39325} {RNA815_18022}

Mlig455_049894 {REF} {Length: 775} {RNA1310_39325} {RNA815_18022}
16. MligTC455_47440 202 4.21 Mlig455_045850

Neo: -

Age: Up-Down-Up

0.964 - - 0.964 - - - Mlig455_045850 {REF} {Length: 2995} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=170, Expect=5e-46]} {RNA1509_4754} {RNA1310_5693.1} {RNA815_2001}
17. MligTC455_37394 43 0.89 Mlig455_013716

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.606

STK26 0.962 - - - 0.962 - - Mlig455_013716 {REF} {Length: 3206} {Pfam: Protein kinase domain [PF00069.27, score=84.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=58.2]; Ankyrin repeats (many copies) [PF13637.8, score=54.2]; Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF13606.8, score=34.0]; Ankyrin repeat [PF00023.32, score=23.7]} {Human: ENSG00000134602, STK26, serine/threonine kinase 26, [Score=65.9, Expect=7e-11]; ENSG00000065613, SLK, STE20 like kinase, [Score=65.1, Expect=4e-10]; ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=65.1, Expect=4e-10]; ENSG00000137601, NEK1, NIMA related kinase 1, [Score=64.3, Expect=7e-10]; ENSG00000132155, RAF1, Raf-1 proto-oncogene, serine/threonine kinase, [Score=64.3, Expect=5e-10]; ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=63.5, Expect=1e-09]} {Mouse: ENSMUSG00000031644, Nek1, NIMA (never in mitosis gene a)-related expressed kinase 1, [Score=65.1, Expect=3e-10]; ENSMUSG00000031112, Stk26, serine/threonine kinase 26, [Score=64.7, Expect=2e-10]; ENSMUSG00000025060, Slk, STE20-like kinase, [Score=64.3, Expect=5e-10]; ENSMUSG00000000441, Raf1, v-raf-leukemia viral oncogene 1, [Score=63.9, Expect=5e-10]; ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=63.2, Expect=1e-09]} {Dmel: FBgn0031299, CG4629, [Score=56.2, Expect=7e-08]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=54.3, Expect=3e-07]} {Smed: dd_Smed_v6_1196_0_1, dd_Smed_v6_1196_0_1, [Score=51.2, Expect=7e-07]} {RNA1509_11136} {RNA1310_29101} {RNA815_16478}
18. MligTC455_15671 88 1.84 Mlig455_059458

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.370

Region-enriched R4: 4.705/0.00509

KIAA0895L 0.96 - - 0.960 - - - Mlig455_059458 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1704) [PF08014.13, score=37.3]} {Human: ENSG00000196123, KIAA0895L, KIAA0895 like, [RH, Score=151, Expect=4e-40]; ENSG00000164542, KIAA0895, KIAA0895, [RH, Score=150, Expect=1e-39]} {Mouse: ENSMUSG00000014837, 4931428F04Rik, RIKEN cDNA 4931428F04 gene, [RH, Score=156, Expect=4e-42]} {Smed: dd_Smed_v6_103892_0_1, dd_Smed_v6_103892_0_1, [RH, Score=98.6, Expect=3e-25]} {RNA1509_47713, RNA1509_49841} {RNA1310_17536.1, RNA1509_47713, RNA1509_49841} {RNA1509_47713, RNA1509_49841, RNA815_7463.1}
19. MligTC455_37452 116 2.42 Mlig455_046278

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_046278 {REF} {Length: 4416} {Pfam: Antitoxin VbhA [PF18495.3, score=20.4]} {RNA1509_26805, RNA1509_49672} {RNA1310_2903.3, RNA1509_49672} {RNA1509_49672, RNA815_6251}
20. MligTC455_43584 142 2.97 Mlig455_032253

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_032253 {REF} {Length: 1863} {Pfam: Dynein light chain type 1 [PF01221.20, score=60.3]; Ground-like domain [PF04155.20, score=21.2]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [Score=48.9, Expect=1e-07]} {RNA1509_23648} {RNA1310_73070} {RNA815_39295}
21. MligTC455_48568 56 1.18 Mlig455_066807

Neo: -

Age: -

0.953 - - 0.953 - - - Mlig455_066807 {REF} {Length: 1749} {NoTransDecoderORF} {RNA1310_59259}
22. MligTC455_45161 29 0.6 Mlig455_027613

Neo: Irradiation

Age: -

WSCD2 0.952 - - - - 0.952 - Mlig455_027613 {REF} {Length: 1427} {Pfam: WSC domain [PF01822.21, score=56.9]; PAN domain [PF00024.28, score=21.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=4e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=8e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.8, Expect=4e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1}
23. MligTC455_00601 133 2.77 Mlig455_054054

Neo: -

Age: -

0.951 - - 0.951 - - - Mlig455_054054 {REF} {Length: 2328} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
24. MligTC455_39420 105 2.18 Mlig455_026401

Neo: -

Age: Down-Up-Down

DIDO1 0.951 - - - 0.951 - - Mlig455_026401 {REF} {Length: 4026} {TRANSSPLICED} {Pfam: SPOC domain [PF07744.15, score=43.7]; PHD-finger [PF00628.31, score=22.2]} {Human: ENSG00000101191, DIDO1, death inducer-obliterator 1, [RH, Score=90.9, Expect=6e-18]} {Mouse: ENSMUSG00000038914, Dido1, death inducer-obliterator 1, [RH, Score=93.2, Expect=1e-18]; ENSMUSG00000048874, Phf3, PHD finger protein 3, [RH, Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_7712_0_2, dd_Smed_v6_7712_0_2, [Score=75.1, Expect=9e-14]} {RNA1509_29481} {RNA1310_13018} {RNA815_5509}
25. MligTC455_46748 216 4.51 Mlig455_012842

Neo: -

Age: Down-Up-Up

0.951 - - - - 0.951 - Mlig455_012842 {REF} {Length: 1460} {Pfam: MIT (microtubule interacting and transport) domain [PF04212.20, score=25.1]} {RNA1310_28416.2} {RNA815_36900}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA