TomoSeq data search

Data search

Results for MligTC455_31934

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31934	382	7.96	Mlig455_003763, Mlig455_043367	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.972	SETMAR	Mlig455_003763 {REF} {Length: 13315} {TRANSSPLICED} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=52.2]; Homeodomain-like domain [PF13565.8, score=29.6]; Transposase (partial DDE domain) [PF01359.20, score=29.0]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=155, Expect=4e-42]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=56.2, Expect=4e-10]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_043367 {REF} {Length: 1188} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=29.9]; Transposase (partial DDE domain) [PF01359.20, score=20.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=136, Expect=2e-35]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.1, Expect=2e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_31934

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.745	3.409	0.48837	1.00000
RegionR2	2.003	3.409	0.04805	0.26032
RegionR3	1.071	3.409	0.28392	0.82692
RegionR4	1.517	3.409	0.13160	0.36779
RegionR5	0.382	3.409	0.69874	1.00000
RegionR6	-0.294	3.409	0.87165	1.00000
RegionR7	-1.563	3.409	0.50854	1.00000
RegionR8	-0.372	3.409	0.88956	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.266	3.409	0.79944	1.00000
RegenerationR2	1.123	3.409	0.09233	0.48487
RegenerationR3	1.725	3.409	0.02646	0.29298
RegenerationR4	0.93	3.409	0.25922	0.70746
RegenerationR5	1.745	3.409	0.02751	0.28078
RegenerationR6	2.773	3.409	0.00392	0.07472
RegenerationBL	3.425	3.409	0.00068	0.01757
RegenerationTP	3.7	3.409	0.00228	0.07771

Genes with expression patterns similar to MligTC455_31934

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31934	382	7.96	Mlig455_003763, Mlig455_043367	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.972	SETMAR	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_003763 {REF} {Length: 13315} {TRANSSPLICED} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=52.2]; Homeodomain-like domain [PF13565.8, score=29.6]; Transposase (partial DDE domain) [PF01359.20, score=29.0]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=155, Expect=4e-42]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=56.2, Expect=4e-10]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_043367 {REF} {Length: 1188} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=29.9]; Transposase (partial DDE domain) [PF01359.20, score=20.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=136, Expect=2e-35]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.1, Expect=2e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}
2.	MligTC455_27842	1017	21.19	Mlig455_021051, Mlig455_052351	Neo: - Age: Down-Down-Up Regeneration-enriched TP: 4.635 Regeneration-enriched BL: 4.540		4.453	0.820	-	0.838	0.955	0.984	0.856	Mlig455_021051 {REF} {Length: 11271} {Pfam: Zinc knuckle [PF00098.25, score=18.6]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_052351 {REF} {Length: 9553} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
3.	MligTC455_27841	1118	23.3	Mlig455_021442, Mlig455_037900	Neo: - Age: - Regeneration-upregulated BL: 4.099 Regeneration-enriched BL: 4.099		3.644	0.765	-	-	0.947	0.953	0.979	Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
4.	MligTC455_27855	104	2.17	Mlig455_060054	Neo: - Age: -		1.899	-	-	-	-	0.959	0.940	Mlig455_060054 {REF} {Length: 828} {Pfam: Zinc knuckle [PF00098.25, score=20.6]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1}
5.	MligTC455_13251	89	1.86	Mlig455_005191	Neo: - Age: logFC(26M/2M)=-0.503		1.855	-	-	-	-	0.898	0.957	Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
6.	MligTC455_29628	238	4.96	Mlig455_024037	Neo: - Age: -		1.84	-	-	-	-	0.964	0.876	Mlig455_024037 {REF} {Length: 6871} {Celegans: WBGene00019192, H12I13.3, [Score=142, Expect=3e-39]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=115, Expect=2e-29]} {RNA1509_28643, RNA1509_8360} {RNA1310_576.1, RNA1509_28643, RNA1509_8360} {RNA1509_28643, RNA1509_8360, RNA815_1671.1}
7.	MligTC455_38112	144	3	Mlig455_035800, Mlig455_068307	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.078		1.733	-	-	-	0.783	-	0.950	Mlig455_035800 {REF} {Length: 440} {NoTransDecoderORF} Mlig455_068307 {REF} {Length: 195} {NoTransDecoderORF}
8.	MligTC455_27839	307	6.4	Mlig455_007792	Neo: - Age: -		1.729	-	-	-	0.756	0.973	-	Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
9.	MligTC455_37128	155	3.22	Mlig455_066474, Mlig455_066476	Neo: - Age: -		1.719	-	-	-	-	0.767	0.952	Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1} Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857}
10.	MligTC455_07285	48	1	Mlig455_045441	Neo: - Age: -		1.717	-	-	-	-	0.761	0.956	Mlig455_045441 {REF} {Length: 504} {NoTransDecoderORF}
11.	MligTC455_19369	174	3.62	Mlig455_027643	Neo: - Age: -		1.712	-	-	-	0.748	0.964	-	Mlig455_027643 {REF} {Length: 677} {RNA1509_8759} {RNA1310_60559} {RNA815_28038}
12.	MligTC455_11889	66	1.37	Mlig455_040154	Neo: - Age: -		1.668	-	-	-	-	0.710	0.958	Mlig455_040154 {REF} {Length: 1508} {RNA1509_18432} {RNA1310_134295} {RNA815_29071}
13.	MligTC455_28596	52	1.08	Mlig455_039629	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_039629 {REF} {Length: 1244} {Pfam: Integrase core domain [PF00665.28, score=31.2]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
14.	MligTC455_42881	3632	75.66	Mlig455_008338	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.182	EEF2K	0.966	-	-	-	-	0.966	-	Mlig455_008338 {REF} {Length: 4193} {Pfam: Alpha-kinase family [PF02816.20, score=188.2]} {Human: ENSG00000103319, EEF2K, eukaryotic elongation factor 2 kinase, [RH, Score=338, Expect=6e-107]} {Mouse: ENSMUSG00000035064, Eef2k, eukaryotic elongation factor-2 kinase, [Score=339, Expect=9e-104]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [RH, Score=320, Expect=2e-96]} {Smed: dd_Smed_v6_9576_0_1, dd_Smed_v6_9576_0_1, [Score=404, Expect=9e-131]} {RNA1509_1554} {RNA1310_5135.1} {RNA815_1164.1}
15.	MligTC455_38237	81	1.69	Mlig455_034923, Mlig455_037360, Mlig455_070135, Mlig455_070138, Mlig455_070426	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_034923 {REF} {Length: 308} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978} Mlig455_037360 {REF} {Length: 1049} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070135 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070138 {REF} {Length: 384} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070426 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978}
16.	MligTC455_33622	44	0.92	Mlig455_053946, Mlig455_060582	Neo: - Age: Up-Down-Down	MTNR1B	0.958	-	-	-	-	0.958	-	Mlig455_053946 {REF} {Length: 3240} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=156.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.1]} {Human: ENSG00000134640, MTNR1B, melatonin receptor 1B, [Score=136, Expect=4e-36]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=130, Expect=2e-32]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=126, Expect=1e-32]; ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=123, Expect=3e-30]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=122, Expect=5e-31]} {Dmel: FBgn0025631, moody, [Score=105, Expect=2e-24]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=203, Expect=2e-62]} {RNA1509_18800} {RNA1310_23658} {RNA815_33287} Mlig455_060582 {REF} {Length: 3239} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=156.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.1]} {Human: ENSG00000134640, MTNR1B, melatonin receptor 1B, [Score=136, Expect=4e-36]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=130, Expect=2e-32]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=126, Expect=1e-32]; ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=123, Expect=3e-30]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=122, Expect=5e-31]} {Dmel: FBgn0025631, moody, [Score=105, Expect=2e-24]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=203, Expect=2e-62]} {RNA1509_18800} {RNA1310_23658} {RNA815_33287}
17.	MligTC455_39724	59	1.22	Mlig455_026218	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_026218 {REF} {Length: 448} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_87210} {RNA815_14978}
18.	MligTC455_27834	437	9.11	Mlig455_003625, Mlig455_044671	Neo: - Age: logFC(26M/2M)=1.954		0.957	-	-	-	-	0.957	-	Mlig455_003625 {REF} {Length: 8904} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=51.2]; DDE superfamily endonuclease [PF13358.8, score=21.8]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=205, Expect=2e-60]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_044671 {REF} {Length: 10362} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
19.	MligTC455_21713	106	2.2	Mlig455_003036, Mlig455_021077	Neo: - Age: Up-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_003036 {REF} {Length: 6852} {NoTransDecoderORF} {RNA1509_9107} {RNA1310_45895} {RNA815_43984} Mlig455_021077 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_52677} {RNA1310_48522}
20.	MligTC455_17093	80	1.66	Mlig455_017996, Mlig455_033314	Neo: - Age: - Region-enriched R2: 6.003/0.02910		0.952	-	-	-	0.952	-	-	Mlig455_017996 {REF} {Length: 419} {RNA1509_12056} {RNA1310_35431} {RNA815_12242.1} Mlig455_033314 {REF} {Length: 1630} {NoTransDecoderORF} {RNA1509_12056} {RNA1310_35431} {RNA815_12242.1}