TomoSeq data search

Data search

Results for MligTC455_27842

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27842

1017

21.19

Mlig455_021051, Mlig455_052351

Neo: -

Age: Down-Down-Up

Regeneration-enriched TP: 4.635
Regeneration-enriched BL: 4.540

Mlig455_021051 {REF} {Length: 11271} {Pfam: Zinc knuckle [PF00098.25, score=18.6]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}

Mlig455_052351 {REF} {Length: 9553} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}

Cumulative graph for MligTC455_27842

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.496	4.577	0.74936	1.00000
RegionR2	1.557	4.577	0.06841	0.31790
RegionR3	1.262	4.577	0.09197	0.53437
RegionR4	1.545	4.577	0.06285	0.22518
RegionR5	0.346	4.577	0.64560	0.99764
RegionR6	-0.538	4.577	0.60247	1.00000
RegionR7	-2.132	4.577	0.14425	0.70817
RegionR8	-2.536	4.577	0.21074	0.81407

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.176	4.577	0.93337	1.00000
RegenerationR2	1.412	4.577	0.05254	0.37805
RegenerationR3	1.358	4.577	0.07346	0.45316
RegenerationR4	1.016	4.577	0.21512	0.66200
RegenerationR5	1.76	4.577	0.02711	0.27973
RegenerationR6	2.847	4.577	0.00254	0.05719
RegenerationBL	4.54	4.577	0.00000	0.00008
RegenerationTP	4.635	4.577	0.00006	0.00808

Genes with expression patterns similar to MligTC455_27842

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27842	1017	21.19	Mlig455_021051, Mlig455_052351	Neo: - Age: Down-Down-Up Regeneration-enriched TP: 4.635 Regeneration-enriched BL: 4.540		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021051 {REF} {Length: 11271} {Pfam: Zinc knuckle [PF00098.25, score=18.6]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_052351 {REF} {Length: 9553} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.6]; Integrase zinc binding domain [PF17921.3, score=71.0]; Integrase core domain [PF00665.28, score=47.5]; Aspartyl protease [PF13650.8, score=38.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.5]; Retroviral aspartyl protease [PF00077.22, score=26.8]; Aspartyl protease [PF09668.12, score=22.8]; Putative peptidase (DUF1758) [PF05585.14, score=21.8]; Retroviral aspartyl protease [PF08284.13, score=18.9]; DDE superfamily endonuclease [PF13358.8, score=18.6]} {Smed: dd_Smed_v6_1574_6_41, dd_Smed_v6_1574_6_41, [Score=335, Expect=6e-100]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
2.	MligTC455_27841	1118	23.3	Mlig455_021442, Mlig455_037900	Neo: - Age: - Regeneration-upregulated BL: 4.099 Regeneration-enriched BL: 4.099		5.488	0.991	0.798	0.952	0.971	0.987	0.789	Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
3.	MligTC455_31934	382	7.96	Mlig455_003763, Mlig455_043367	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.972	SETMAR	4.453	0.820	-	0.838	0.955	0.984	0.856	Mlig455_003763 {REF} {Length: 13315} {TRANSSPLICED} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=52.2]; Homeodomain-like domain [PF13565.8, score=29.6]; Transposase (partial DDE domain) [PF01359.20, score=29.0]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=155, Expect=4e-42]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=56.2, Expect=4e-10]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_043367 {REF} {Length: 1188} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=29.9]; Transposase (partial DDE domain) [PF01359.20, score=20.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=136, Expect=2e-35]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.1, Expect=2e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}
4.	MligTC455_27839	307	6.4	Mlig455_007792	Neo: - Age: -		2.539	-	-	-	0.846	0.968	0.725	Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
5.	MligTC455_29220	298	6.21	Mlig455_053072	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.724 Region-enriched R2: 2.616/0.03046		2.478	0.975	-	0.730	0.773	-	-	Mlig455_053072 {REF} {Length: 8981} {Pfam: Helix-turn-helix [PF01381.24, score=36.9]; Kinetoplastid membrane protein 11 [PF03037.18, score=27.5]; Family of unknown function (DUF6374) [PF19901.1, score=26.8]; Domain of unknown function (DUF5053) [PF16476.7, score=26.7]; Maf N-terminal region [PF08383.13, score=19.4]} {RNA1509_50040} {RNA1310_688} {RNA815_433.1}
6.	MligTC455_27843	317	6.6	Mlig455_054197	Neo: - Age: - Regeneration-enriched R6: 4.237 Regeneration-enriched BL: 4.138		1.874	-	-	-	0.953	0.921	-	Mlig455_054197 {REF} {Length: 1106} {Pfam: Zinc knuckle [PF00098.25, score=22.3]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1}
7.	MligTC455_23866	384	8.01	Mlig455_002342	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.442 Region-enriched R5: 1.898/0.04942	MARS2	1.789	-	-	-	0.959	0.830	-	Mlig455_002342 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=211.4]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=33.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=19.0]} {Human: ENSG00000247626, MARS2, methionyl-tRNA synthetase 2, mitochondrial, [Score=301, Expect=7e-95]} {Mouse: ENSMUSG00000046994, Mars2, methionine-tRNA synthetase 2 (mitochondrial), [Score=291, Expect=2e-91]} {Dmel: FBgn0027083, MetRS-m, Methionyl-tRNA synthetase, mitochondrial, [Score=310, Expect=6e-99]} {Celegans: WBGene00013678, Y105E8A.20, Methionyl-tRNA synthetase (Mitochondrial), [Score=291, Expect=3e-92]} {Smed: dd_Smed_v6_12525_0_2, dd_Smed_v6_12525_0_2, [Score=276, Expect=1e-86]} {RNA1509_34702} {RNA1310_17351} {RNA815_6878}
8.	MligTC455_48454	602	12.54	Mlig455_041932	Neo: - Age: Down-Up-Down	CCDC154	1.789	0.959	-	-	-	0.830	-	Mlig455_041932 {REF} {Length: 4159} {Pfam: Coiled-coil domain-containing protein 154 [PF15450.8, score=111.7]} {Human: ENSG00000197599, CCDC154, coiled-coil domain containing 154, [Score=94.7, Expect=2e-19]} {Mouse: ENSMUSG00000059562, Ccdc154, coiled-coil domain containing 154, [Score=86.3, Expect=5e-17]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=51.2, Expect=3e-06]} {Smed: dd_Smed_v6_10236_0_1, dd_Smed_v6_10236_0_1, [Score=407, Expect=1e-131]} {RNA1509_37351, RNA1509_5383} {RNA1310_2073.1, RNA1509_37351, RNA1509_5383} {RNA1509_37351, RNA1509_5383, RNA815_2050}
9.	MligTC455_29628	238	4.96	Mlig455_024037	Neo: - Age: -		1.697	-	-	-	-	0.959	0.738	Mlig455_024037 {REF} {Length: 6871} {Celegans: WBGene00019192, H12I13.3, [Score=142, Expect=3e-39]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=115, Expect=2e-29]} {RNA1509_28643, RNA1509_8360} {RNA1310_576.1, RNA1509_28643, RNA1509_8360} {RNA1509_28643, RNA1509_8360, RNA815_1671.1}
10.	MligTC455_27834	437	9.11	Mlig455_003625, Mlig455_044671	Neo: - Age: logFC(26M/2M)=1.954		1.696	-	-	-	0.718	0.978	-	Mlig455_003625 {REF} {Length: 8904} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=51.2]; DDE superfamily endonuclease [PF13358.8, score=21.8]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=205, Expect=2e-60]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_044671 {REF} {Length: 10362} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
11.	MligTC455_28321	81	1.69	Mlig455_060693	Neo: - Age: -		1.662	-	-	-	0.703	0.959	-	Mlig455_060693 {REF} {Length: 1631} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=46.4]; Recombination endonuclease VII [PF02945.17, score=22.6]} {Celegans: WBGene00022511, ZC53.4, [Score=177, Expect=4e-47]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=218, Expect=6e-63]} {RNA1509_8360} {RNA1310_576.1} {RNA815_1671.1}
12.	MligTC455_28928	58	1.21	Mlig455_017643	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_017643 {REF} {Length: 7040} {Pfam: Replication protein A OB domain [PF16900.7, score=65.3]; OB-fold nucleic acid binding domain [PF01336.27, score=33.0]} {RNA1509_57189} {RNA1310_50941.1} {RNA815_26807}
13.	MligTC455_21713	106	2.2	Mlig455_003036, Mlig455_021077	Neo: - Age: Up-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_003036 {REF} {Length: 6852} {NoTransDecoderORF} {RNA1509_9107} {RNA1310_45895} {RNA815_43984} Mlig455_021077 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_52677} {RNA1310_48522}
14.	MligTC455_42881	3632	75.66	Mlig455_008338	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.182	EEF2K	0.954	-	-	-	-	0.954	-	Mlig455_008338 {REF} {Length: 4193} {Pfam: Alpha-kinase family [PF02816.20, score=188.2]} {Human: ENSG00000103319, EEF2K, eukaryotic elongation factor 2 kinase, [RH, Score=338, Expect=6e-107]} {Mouse: ENSMUSG00000035064, Eef2k, eukaryotic elongation factor-2 kinase, [Score=339, Expect=9e-104]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [RH, Score=320, Expect=2e-96]} {Smed: dd_Smed_v6_9576_0_1, dd_Smed_v6_9576_0_1, [Score=404, Expect=9e-131]} {RNA1509_1554} {RNA1310_5135.1} {RNA815_1164.1}
15.	MligTC455_33622	44	0.92	Mlig455_053946, Mlig455_060582	Neo: - Age: Up-Down-Down	MTNR1B	0.953	-	-	-	-	0.953	-	Mlig455_053946 {REF} {Length: 3240} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=156.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.1]} {Human: ENSG00000134640, MTNR1B, melatonin receptor 1B, [Score=136, Expect=4e-36]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=130, Expect=2e-32]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=126, Expect=1e-32]; ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=123, Expect=3e-30]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=122, Expect=5e-31]} {Dmel: FBgn0025631, moody, [Score=105, Expect=2e-24]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=203, Expect=2e-62]} {RNA1509_18800} {RNA1310_23658} {RNA815_33287} Mlig455_060582 {REF} {Length: 3239} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=156.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.1]} {Human: ENSG00000134640, MTNR1B, melatonin receptor 1B, [Score=136, Expect=4e-36]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=130, Expect=2e-32]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=126, Expect=1e-32]; ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=123, Expect=3e-30]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=122, Expect=5e-31]} {Dmel: FBgn0025631, moody, [Score=105, Expect=2e-24]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=203, Expect=2e-62]} {RNA1509_18800} {RNA1310_23658} {RNA815_33287}
16.	MligTC455_26615	572	11.92	Mlig455_045072	Neo: - Age: logFC(26M/2M)=-0.522		0.952	0.952	-	-	-	-	-	Mlig455_045072 {REF} {Length: 1124} {RNA1509_43319} {RNA1310_55165, RNA1509_43319} {RNA1509_43319, RNA815_27927}
17.	MligTC455_31257	229	4.78	Mlig455_070423	Neo: - Age: -	STK3	0.952	-	-	-	0.952	-	-	Mlig455_070423 {REF} {Length: 3240} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.9]; C terminal SARAH domain of Mst1 [PF11629.10, score=69.2]; ABC1 atypical kinase-like domain [PF03109.18, score=37.8]; Fungal protein kinase [PF17667.3, score=36.0]} {Human: ENSG00000104375, STK3, serine/threonine kinase 3, [RH, Score=553, Expect=0.0]} {Mouse: ENSMUSG00000022329, Stk3, serine/threonine kinase 3, [RH, Score=548, Expect=0.0]; ENSMUSG00000018209, Stk4, serine/threonine kinase 4, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0261456, hpo, hippo, [RH, Score=462, Expect=9e-157]} {Celegans: WBGene00017472, cst-1, Serine/threonine-protein kinase cst-1 Serine/threonine-protein kinase cst-1 37kDa subunit Serine/threonine-protein kinase cst-1 18kDa subunit, [RH, Score=492, Expect=5e-171]} {Smed: dd_Smed_v6_4384_0_1, dd_Smed_v6_4384_0_1, [RH, Score=479, Expect=3e-166]} {RNA1509_15462} {RNA1310_15236, RNA1509_15462} {RNA1509_15462, RNA815_5298.1}
18.	MligTC455_42370	1918	39.97	Mlig455_064104	Neo: - Age: logFC(26M/2M)=-0.367	CAV1	0.951	-	-	-	-	0.951	-	Mlig455_064104 {REF} {Length: 2616} {Pfam: Caveolin [PF01146.19, score=143.1]} {Human: ENSG00000105974, CAV1, caveolin 1, [RH, Score=117, Expect=4e-31]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [RH, Score=122, Expect=4e-33]} {Celegans: WBGene00000302, cav-2, Caveolin-2, [RH, Score=77.0, Expect=1e-15]} {Smed: dd_Smed_v6_6535_0_2, dd_Smed_v6_6535_0_2, [Score=91.7, Expect=2e-22]} {RNA1509_42761} {RNA1310_10782.2} {RNA815_16688.1}
19.	MligTC455_28596	52	1.08	Mlig455_039629	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_039629 {REF} {Length: 1244} {Pfam: Integrase core domain [PF00665.28, score=31.2]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

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