TomoSeq data search

Data search

Results for MligTC455_32231

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32231	10	0.21	Mlig455_057831	Neo: - Age: -	DST	Mlig455_057831 {REF} {Length: 1734} {Pfam: Calponin homology (CH) domain [PF00307.33, score=76.7]; CAMSAP CH domain [PF11971.10, score=23.5]} {Human: ENSG00000151914, DST, dystonin, [Score=143, Expect=8e-40]; ENSG00000178209, PLEC, plectin, [Score=143, Expect=5e-40]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [Score=143, Expect=4e-40]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Dmel: FBgn0013733, shot, short stop, [Score=156, Expect=7e-45]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=116, Expect=6e-31]} {Smed: dd_Smed_v6_1205_0_10, dd_Smed_v6_1205_0_10, [Score=118, Expect=1e-31]} {RNA1509_9103} {RNA1310_12936.1} {RNA815_17574.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32231

0.21

Mlig455_057831

Neo: -

Age: -

DST

Mlig455_057831 {REF} {Length: 1734} {Pfam: Calponin homology (CH) domain [PF00307.33, score=76.7]; CAMSAP CH domain [PF11971.10, score=23.5]} {Human: ENSG00000151914, DST, dystonin, [Score=143, Expect=8e-40]; ENSG00000178209, PLEC, plectin, [Score=143, Expect=5e-40]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [Score=143, Expect=4e-40]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Dmel: FBgn0013733, shot, short stop, [Score=156, Expect=7e-45]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=116, Expect=6e-31]} {Smed: dd_Smed_v6_1205_0_10, dd_Smed_v6_1205_0_10, [Score=118, Expect=1e-31]} {RNA1509_9103} {RNA1310_12936.1} {RNA815_17574.1}

Cumulative graph for MligTC455_32231

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.358	0.643	1.00000	1.00000
RegionR2	-1.53	0.643	0.99977	1.00000
RegionR3	0.326	0.643	1.00000	1.00000
RegionR4	1.747	0.643	0.99986	1.00000
RegionR5	1.143	0.643	0.99986	1.00000
RegionR6	0.027	0.643	0.99987	1.00000
RegionR7	-0.394	0.643	0.99992	1.00000
RegionR8	0.039	0.643	0.99970	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.109	0.643	0.99991	1.00000
RegenerationR2	2.572	0.643	0.91820	1.00000
RegenerationR3	1.279	0.643	0.01770	0.24296
RegenerationR4	0.707	0.643	0.73933	0.96738
RegenerationR5	-1.222	0.643	0.99993	1.00000
RegenerationR6	2.551	0.643	0.15664	0.48388
RegenerationBL	-1.089	0.643	0.99993	1.00000
RegenerationTP	-0.787	0.643	0.99984	1.00000

Genes with expression patterns similar to MligTC455_32231

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32231	10	0.21	Mlig455_057831	Neo: - Age: -	DST	1	-	-	-	1.000	-	-	Mlig455_057831 {REF} {Length: 1734} {Pfam: Calponin homology (CH) domain [PF00307.33, score=76.7]; CAMSAP CH domain [PF11971.10, score=23.5]} {Human: ENSG00000151914, DST, dystonin, [Score=143, Expect=8e-40]; ENSG00000178209, PLEC, plectin, [Score=143, Expect=5e-40]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [Score=143, Expect=4e-40]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Dmel: FBgn0013733, shot, short stop, [Score=156, Expect=7e-45]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=116, Expect=6e-31]} {Smed: dd_Smed_v6_1205_0_10, dd_Smed_v6_1205_0_10, [Score=118, Expect=1e-31]} {RNA1509_9103} {RNA1310_12936.1} {RNA815_17574.1}
2.	MligTC455_30104	32	0.66	Mlig455_065086	Neo: - Age: Up-Down-Down	UNC93A	0.978	-	-	-	0.978	-	-	Mlig455_065086 {REF} {Length: 2948} {Pfam: Major Facilitator Superfamily [PF07690.18, score=33.2]; Ion channel regulatory protein UNC-93 [PF05978.18, score=26.3]} {Human: ENSG00000112494, UNC93A, unc-93 homolog A, [Score=211, Expect=6e-62]} {Mouse: ENSMUSG00000056133, Unc93a2, unc-93 homolog A2, [Score=206, Expect=4e-60]; ENSMUSG00000067049, Unc93a, unc-93 homolog A, [Score=206, Expect=3e-60]} {Dmel: FBgn0027556, CG4928, [Score=242, Expect=1e-73]} {Celegans: WBGene00007774, C27C12.4, [Score=62.8, Expect=2e-10]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_30192}
3.	MligTC455_33747	54	1.13	Mlig455_059482	Neo: - Age: -	GRIK2	0.962	-	-	-	0.962	-	-	Mlig455_059482 {REF} {Length: 4944} {Pfam: Ligand-gated ion channel [PF00060.28, score=159.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=111.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=82.7]; Receptor family ligand binding region [PF01094.30, score=23.2]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=392, Expect=5e-122]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=385, Expect=3e-119]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=385, Expect=8e-119]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=391, Expect=1e-121]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=387, Expect=9e-121]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=383, Expect=2e-118]} {Dmel: FBgn0039927, CG11155, [Score=373, Expect=6e-115]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=326, Expect=5e-98]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=455, Expect=2e-145]} {RNA1310_7590.1} {RNA815_26485}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_32231

0.21

Mlig455_057831

Neo: -

Age: -

DST

1.000

MligTC455_30104

0.66

Mlig455_065086

Neo: -

Age: Up-Down-Down

UNC93A

0.978

Mlig455_065086 {REF} {Length: 2948} {Pfam: Major Facilitator Superfamily [PF07690.18, score=33.2]; Ion channel regulatory protein UNC-93 [PF05978.18, score=26.3]} {Human: ENSG00000112494, UNC93A, unc-93 homolog A, [Score=211, Expect=6e-62]} {Mouse: ENSMUSG00000056133, Unc93a2, unc-93 homolog A2, [Score=206, Expect=4e-60]; ENSMUSG00000067049, Unc93a, unc-93 homolog A, [Score=206, Expect=3e-60]} {Dmel: FBgn0027556, CG4928, [Score=242, Expect=1e-73]} {Celegans: WBGene00007774, C27C12.4, [Score=62.8, Expect=2e-10]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_30192}

MligTC455_33747

1.13

Mlig455_059482

Neo: -

Age: -

GRIK2

0.962

Mlig455_059482 {REF} {Length: 4944} {Pfam: Ligand-gated ion channel [PF00060.28, score=159.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=111.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=82.7]; Receptor family ligand binding region [PF01094.30, score=23.2]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=392, Expect=5e-122]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=385, Expect=3e-119]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=385, Expect=8e-119]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=391, Expect=1e-121]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=387, Expect=9e-121]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=383, Expect=2e-118]} {Dmel: FBgn0039927, CG11155, [Score=373, Expect=6e-115]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=326, Expect=5e-98]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=455, Expect=2e-145]} {RNA1310_7590.1} {RNA815_26485}