Data search
Results for MligTC455_33747
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33747 | 54 | 1.13 | Mlig455_059482 | Neo: - Age: - |
GRIK2 | Mlig455_059482 {REF} {Length: 4944} {Pfam: Ligand-gated ion channel [PF00060.28, score=159.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=111.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=82.7]; Receptor family ligand binding region [PF01094.30, score=23.2]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=392, Expect=5e-122]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=385, Expect=3e-119]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=385, Expect=8e-119]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=391, Expect=1e-121]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=387, Expect=9e-121]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=383, Expect=2e-118]} {Dmel: FBgn0039927, CG11155, [Score=373, Expect=6e-115]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=326, Expect=5e-98]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=455, Expect=2e-145]} {RNA1310_7590.1} {RNA815_26485} |
Cumulative graph for MligTC455_33747
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.532 | 1.307 | 0.26740 | 0.91733 | |
| RegionR2 | -0.845 | 1.307 | 0.98018 | 1.00000 | |
| RegionR3 | 1.873 | 1.307 | 0.02317 | 0.25878 | |
| RegionR4 | -0.2 | 1.307 | 0.86777 | 1.00000 | |
| RegionR5 | -0.912 | 1.307 | 0.97348 | 1.00000 | |
| RegionR6 | 0.021 | 1.307 | 0.74926 | 1.00000 | |
| RegionR7 | -3.792 | 1.307 | 0.19281 | 0.79786 | |
| RegionR8 | 1.324 | 1.307 | 0.37178 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.46 | 1.307 | 0.63467 | 1.00000 | |
| RegenerationR2 | 2.254 | 1.307 | 0.09257 | 0.48537 | |
| RegenerationR3 | 0.824 | 1.307 | 0.36568 | 0.78038 | |
| RegenerationR4 | 1.475 | 1.307 | 0.21124 | 0.65875 | |
| RegenerationR5 | 1.27 | 1.307 | 0.22403 | 0.65825 | |
| RegenerationR6 | 2.226 | 1.307 | 0.06223 | 0.31313 | |
| RegenerationBL | 2.514 | 1.307 | 0.19681 | 0.53340 | |
| RegenerationTP | 2.74 | 1.307 | 0.17073 | 0.60383 |
Genes with expression patterns similar to MligTC455_33747
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33747 | 54 | 1.13 | Mlig455_059482 | Neo: - Age: - |
GRIK2 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_059482 {REF} {Length: 4944} {Pfam: Ligand-gated ion channel [PF00060.28, score=159.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=111.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=82.7]; Receptor family ligand binding region [PF01094.30, score=23.2]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=392, Expect=5e-122]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=385, Expect=3e-119]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=385, Expect=8e-119]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=391, Expect=1e-121]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=387, Expect=9e-121]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=383, Expect=2e-118]} {Dmel: FBgn0039927, CG11155, [Score=373, Expect=6e-115]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=326, Expect=5e-98]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=455, Expect=2e-145]} {RNA1310_7590.1} {RNA815_26485} |
| 2. | MligTC455_53149 | 35 | 0.73 | Mlig455_028208 | Neo: - Age: - |
1.695 | - | - | - | - | 0.952 | 0.743 | Mlig455_028208 {REF} {Length: 2344} {RNA1509_40765} {RNA1310_47463} {RNA815_27999} | |
| 3. | MligTC455_30104 | 32 | 0.66 | Mlig455_065086 | Neo: - Age: Up-Down-Down |
UNC93A | 1.661 | - | - | - | 0.953 | 0.708 | - | Mlig455_065086 {REF} {Length: 2948} {Pfam: Major Facilitator Superfamily [PF07690.18, score=33.2]; Ion channel regulatory protein UNC-93 [PF05978.18, score=26.3]} {Human: ENSG00000112494, UNC93A, unc-93 homolog A, [Score=211, Expect=6e-62]} {Mouse: ENSMUSG00000056133, Unc93a2, unc-93 homolog A2, [Score=206, Expect=4e-60]; ENSMUSG00000067049, Unc93a, unc-93 homolog A, [Score=206, Expect=3e-60]} {Dmel: FBgn0027556, CG4928, [Score=242, Expect=1e-73]} {Celegans: WBGene00007774, C27C12.4, [Score=62.8, Expect=2e-10]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_30192} |
| 4. | MligTC455_09440 | 24 | 0.5 | Mlig455_006762 | Neo: Int S/G2/M Age: - |
0.987 | - | - | - | - | 0.987 | - | Mlig455_006762 {REF} {Length: 2470} {RNA1310_84650} | |
| 5. | MligTC455_26833 | 22 | 0.46 | Mlig455_048301 | Neo: - Age: - |
OPLAH | 0.979 | - | - | - | 0.979 | - | - | Mlig455_048301 {REF} {Length: 4436} {Pfam: Hydantoinase B/oxoprolinase [PF02538.16, score=626.3]; Hydantoinase/oxoprolinase [PF01968.20, score=350.5]; Hydantoinase/oxoprolinase N-terminal region [PF05378.15, score=203.7]; Hydantoinase/oxoprolinase C-terminal domain [PF19278.1, score=36.1]} {Human: ENSG00000178814, OPLAH, 5-oxoprolinase, ATP-hydrolysing, [RH, Score=1454, Expect=0.0]} {Mouse: ENSMUSG00000022562, Oplah, 5-oxoprolinase (ATP-hydrolysing), [RH, Score=1424, Expect=0.0]} {Dmel: FBgn0034733, CG4752, [RH, Score=1391, Expect=0.0]} {Celegans: WBGene00021430, Y38F2AR.12, [RH, Score=1409, Expect=0.0]} {Smed: dd_Smed_v6_5008_0_1, dd_Smed_v6_5008_0_1, [Score=989, Expect=0.0]} {RNA1509_2948, RNA1509_37889} {RNA1310_1508.1, RNA1509_37889} {RNA1509_37889, RNA815_468} |
| 6. | MligTC455_26175 | 77 | 1.61 | Mlig455_001462, Mlig455_004850, Mlig455_030045, Mlig455_039017 | Neo: - Age: - Region-enriched R2: 5.289/0.03235 |
NYNRIN | 0.978 | - | - | - | 0.978 | - | - | Mlig455_001462 {REF} {Length: 3779} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141} Mlig455_004850 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141} Mlig455_030045 {REF} {Length: 4782} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=49.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=44.5]; Aspartyl protease [PF13650.8, score=32.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.6, Expect=5e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=6e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=265, Expect=5e-74]} {RNA1509_38388, RNA1509_56442} {RNA1310_4763.1, RNA1509_38388, RNA1509_56442} {RNA1509_38388, RNA1509_56442, RNA815_16141} Mlig455_039017 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.7]; Aspartyl protease [PF13650.8, score=32.2]; Retroviral aspartyl protease [PF00077.22, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=268, Expect=2e-74]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141} |
| 7. | MligTC455_41737 | 23 | 0.48 | Mlig455_052811 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_052811 {REF} {Length: 1371} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=48.3]; F-box domain [PF00646.35, score=23.4]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=103, Expect=2e-24]} {RNA1509_46531} {RNA1310_25313} {RNA815_8653} | |
| 8. | MligTC455_13968 | 32 | 0.67 | Mlig455_026215 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_026215 {REF} {Length: 974} {RNA1310_41350} {RNA815_28596.1} | |
| 9. | MligTC455_32231 | 10 | 0.21 | Mlig455_057831 | Neo: - Age: - |
DST | 0.962 | - | - | - | 0.962 | - | - | Mlig455_057831 {REF} {Length: 1734} {Pfam: Calponin homology (CH) domain [PF00307.33, score=76.7]; CAMSAP CH domain [PF11971.10, score=23.5]} {Human: ENSG00000151914, DST, dystonin, [Score=143, Expect=8e-40]; ENSG00000178209, PLEC, plectin, [Score=143, Expect=5e-40]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [Score=143, Expect=4e-40]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=141, Expect=3e-39]} {Dmel: FBgn0013733, shot, short stop, [Score=156, Expect=7e-45]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=116, Expect=6e-31]} {Smed: dd_Smed_v6_1205_0_10, dd_Smed_v6_1205_0_10, [Score=118, Expect=1e-31]} {RNA1509_9103} {RNA1310_12936.1} {RNA815_17574.1} |
| 10. | MligTC455_01224 | 39 | 0.82 | Mlig455_025513 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_025513 {REF} {Length: 240} {NoTransDecoderORF} | |
| 11. | MligTC455_31586 | 7 | 0.15 | Mlig455_015306, Mlig455_024657, Mlig455_024660, Mlig455_048641, Mlig455_059721, Mlig455_068887 | Neo: Int S/G2/M Age: - |
ANGPT4, FCN1, TNXB | 0.954 | - | - | - | - | 0.954 | - | Mlig455_015306 {REF} {Length: 1188} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=176.6]} {Human: ENSG00000229353, TNXB, tenascin XB, [RH, Score=135, Expect=5e-35]; ENSG00000236236, TNXB, tenascin XB, [RH, Score=134, Expect=1e-34]; ENSG00000168477, TNXB, tenascin XB, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=132, Expect=5e-34]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=6e-34]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=127, Expect=2e-33]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=126, Expect=7e-33]} {Dmel: FBgn0033312, CG8642, [Score=110, Expect=2e-27]} {Celegans: WBGene00020516, T15B7.1, [Score=60.1, Expect=4e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=112, Expect=8e-28]} {RNA1310_44670.1} {RNA815_23388} Mlig455_024657 {REF} {Length: 866} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=173.9]} {Human: ENSG00000085265, FCN1, ficolin 1, [RH, Score=147, Expect=2e-41]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=136, Expect=1e-37]} {Dmel: FBgn0087011, CG41520, [RH, Score=116, Expect=5e-29]} {Celegans: WBGene00017013, ensh-1, [Score=57.4, Expect=3e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=106, Expect=1e-25]} {RNA1310_35640.2} {RNA815_23388} Mlig455_024660 {REF} {Length: 1657} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=93.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=81.3, Expect=2e-17]; ENSG00000229353, TNXB, tenascin XB, [Score=78.2, Expect=3e-16]; ENSG00000168477, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]; ENSG00000236236, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=75.5, Expect=2e-15]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=73.9, Expect=5e-15]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=73.6, Expect=6e-15]; ENSMUSG00000026938, Fcna, ficolin A, [Score=72.4, Expect=1e-14]} {Dmel: FBgn0033312, CG8642, [Score=66.6, Expect=1e-12]} {RNA1509_16913} {RNA1310_74714} {RNA815_23388} Mlig455_048641 {REF} {Length: 632} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=93.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=81.3, Expect=2e-17]; ENSG00000229353, TNXB, tenascin XB, [Score=78.2, Expect=3e-16]; ENSG00000236236, TNXB, tenascin XB, [Score=77.8, Expect=3e-16]; ENSG00000168477, TNXB, tenascin XB, [Score=77.8, Expect=4e-16]} {Mouse: ENSMUSG00000033327, Tnxb, tenascin XB, [Score=75.5, Expect=2e-15]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=73.6, Expect=5e-15]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=73.6, Expect=6e-15]; ENSMUSG00000026938, Fcna, ficolin A, [Score=72.0, Expect=1e-14]} {Dmel: FBgn0033312, CG8642, [Score=66.6, Expect=1e-12]} {RNA1310_74714} {RNA815_23388} Mlig455_059721 {REF} {Length: 1062} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=173.2]} {Human: ENSG00000085265, FCN1, ficolin 1, [RH, Score=143, Expect=2e-39]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=132, Expect=2e-35]} {Dmel: FBgn0087011, CG41520, [RH, Score=117, Expect=1e-28]} {Celegans: WBGene00017013, ensh-1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=1e-25]} {RNA1310_35640.2} {RNA815_23388} Mlig455_068887 {REF} {Length: 1644} {RNA1509_7417} {RNA1310_35640.1} {RNA815_53151} |
| 12. | MligTC455_13482 | 29 | 0.6 | Mlig455_051983 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_051983 {REF} {Length: 562} {NoTransDecoderORF} {RNA1509_47691} {RNA1310_5733} {RNA815_48413} | |
| 13. | MligTC455_30868 | 86 | 1.8 | Mlig455_007682, Mlig455_020997 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_007682 {REF} {Length: 3292} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.5]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=26.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.3]} {RNA1509_14810} {RNA1310_3488.1, RNA1509_14810} {RNA1509_14810, RNA815_6042.1} Mlig455_020997 {REF} {Length: 4389} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=45.5]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=35.1]; Ankyrin repeats (many copies) [PF13637.8, score=26.8]; Ankyrin repeats (many copies) [PF13857.8, score=26.3]} {RNA1509_14810} {RNA1310_3488.1} {RNA815_6042.1} |