Data search
Results for MligTC455_32281
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32281 | 5104 | 106.34 | Mlig455_035229 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.269 Regeneration-enriched BL: 1.269 |
KHSRP | Mlig455_035229 {REF} {Length: 3840} {Pfam: KH domain [PF00013.31, score=212.2]; KH domain [PF07650.19, score=58.3]; KH domain [PF13083.8, score=45.3]; Domain of unknown function (DUF1897) [PF09005.12, score=42.4]; Mitochondrial inner-membrane-bound regulator [PF14611.8, score=23.6]; KH-like RNA-binding domain [PF16005.7, score=21.6]} {Human: ENSG00000088247, KHSRP, KH-type splicing regulatory protein, [Score=228, Expect=2e-64]; ENSG00000107164, FUBP3, far upstream element binding protein 3, [Score=221, Expect=4e-63]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [Score=231, Expect=4e-67]; ENSMUSG00000007670, Khsrp, KH-type splicing regulatory protein, [Score=229, Expect=5e-65]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [Score=139, Expect=7e-34]} {Celegans: WBGene00022738, ZK418.9, [Score=168, Expect=5e-45]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [Score=171, Expect=1e-45]} {RNA1509_15246} {RNA1310_2973} {RNA815_6833} |
Cumulative graph for MligTC455_32281
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.275 | 6.784 | 0.58943 | 1.00000 | |
| RegionR2 | -0.447 | 6.784 | 0.13797 | 0.46119 | |
| RegionR3 | -0.248 | 6.784 | 0.32673 | 0.86497 | |
| RegionR4 | 0.588 | 6.784 | 0.04307 | 0.17426 | |
| RegionR5 | 0.31 | 6.784 | 0.19009 | 0.47355 | |
| RegionR6 | 0.135 | 6.784 | 0.58903 | 1.00000 | |
| RegionR7 | -0.086 | 6.784 | 0.76692 | 1.00000 | |
| RegionR8 | -0.528 | 6.784 | 0.15012 | 0.70421 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.005 | 6.784 | 0.99433 | 1.00000 | |
| RegenerationR2 | 0.444 | 6.784 | 0.13548 | 0.56272 | |
| RegenerationR3 | 0.61 | 6.784 | 0.05304 | 0.39751 | |
| RegenerationR4 | 0.242 | 6.784 | 0.44536 | 0.83964 | |
| RegenerationR5 | 0.602 | 6.784 | 0.04599 | 0.34964 | |
| RegenerationR6 | 0.679 | 6.784 | 0.02595 | 0.20150 | |
| RegenerationBL | 1.269 | 6.784 | 0.00001 | 0.00056 | Specific for BL: 1.269 |
| RegenerationTP | 0.204 | 6.784 | 0.54866 | 0.93217 |
Genes with expression patterns similar to MligTC455_32281
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32281 | 5104 | 106.34 | Mlig455_035229 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.269 Regeneration-enriched BL: 1.269 |
KHSRP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035229 {REF} {Length: 3840} {Pfam: KH domain [PF00013.31, score=212.2]; KH domain [PF07650.19, score=58.3]; KH domain [PF13083.8, score=45.3]; Domain of unknown function (DUF1897) [PF09005.12, score=42.4]; Mitochondrial inner-membrane-bound regulator [PF14611.8, score=23.6]; KH-like RNA-binding domain [PF16005.7, score=21.6]} {Human: ENSG00000088247, KHSRP, KH-type splicing regulatory protein, [Score=228, Expect=2e-64]; ENSG00000107164, FUBP3, far upstream element binding protein 3, [Score=221, Expect=4e-63]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [Score=231, Expect=4e-67]; ENSMUSG00000007670, Khsrp, KH-type splicing regulatory protein, [Score=229, Expect=5e-65]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [Score=139, Expect=7e-34]} {Celegans: WBGene00022738, ZK418.9, [Score=168, Expect=5e-45]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [Score=171, Expect=1e-45]} {RNA1509_15246} {RNA1310_2973} {RNA815_6833} |
| 2. | MligTC455_35742 | 2981 | 62.11 | Mlig455_012742 | Neo: - Age: - Regeneration-upregulated BL: 1.197 Regeneration-enriched BL: 1.197 |
STT3B | 1.889 | - | - | - | 0.924 | 0.965 | - | Mlig455_012742 {REF} {Length: 4048} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=486.2]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1013, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1228, Expect=0.0]} {RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1310_2492.1, RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1509_1360, RNA1509_27001, RNA1509_6993, RNA815_757} |
| 3. | MligTC455_27291 | 3494 | 72.8 | Mlig455_040513 | Neo: Irradiation Age: logFC(26M/2M)=0.341 Regeneration-enriched BL: 1.592 |
DEK | 1.742 | - | - | - | - | 0.966 | 0.776 | Mlig455_040513 {REF} {Length: 2092} {Pfam: DEK C terminal domain [PF08766.13, score=46.1]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.3, Expect=4e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=8e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=59.7, Expect=3e-09]} {RNA1509_16418, RNA1509_3429} {RNA1310_12184, RNA1509_16418} {RNA1509_16418, RNA815_16871} |
| 4. | MligTC455_35741 | 2900 | 60.42 | Mlig455_012364 | Neo: - Age: - Regeneration-upregulated BL: 1.183 Regeneration-enriched BL: 1.183 |
STT3B | 1.725 | - | - | - | 0.761 | 0.964 | - | Mlig455_012364 {REF} {Length: 3138} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=485.9]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1014, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1231, Expect=0.0]} {RNA1509_1360} {RNA1310_2492.1} {RNA815_757} |
| 5. | MligTC455_27292 | 3532 | 73.59 | Mlig455_040525 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.300 Regeneration-enriched BL: 1.630 |
DEK | 1.712 | - | - | - | - | 0.968 | 0.744 | Mlig455_040525 {REF} {Length: 2029} {TRANSSPLICED} {Pfam: DEK C terminal domain [PF08766.13, score=46.8]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.7, Expect=3e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=6e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=60.5, Expect=2e-09]} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1310_12184, RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384, RNA815_16871} |
| 6. | MligTC455_49028 | 4670 | 97.29 | Mlig455_028156, Mlig455_028227 | Neo: - Age: - |
AP1B1, AP2B1 | 1.698 | - | 0.721 | - | - | 0.977 | - | Mlig455_028156 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=514.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=204.4]; Beta2-adaptin appendage, C-terminal sub-domain [PF09066.12, score=90.3]; HEAT repeats [PF13646.8, score=61.7]; Adaptin C-terminal domain [PF02883.22, score=42.3]; HEAT repeat [PF02985.24, score=37.1]; Nuclear condensing complex subunits, C-term domain [PF12719.9, score=28.4]; Armadillo/beta-catenin-like repeat [PF00514.25, score=23.9]; TATA-binding protein interacting (TIP20) [PF08623.12, score=23.6]; CLASP N terminal [PF12348.10, score=21.2]} {Human: ENSG00000006125, AP2B1, adaptor related protein complex 2 subunit beta 1, [RH, Score=1259, Expect=0.0]; ENSG00000100280, AP1B1, adaptor related protein complex 1 subunit beta 1, [RH, Score=1258, Expect=0.0]} {Mouse: ENSMUSG00000035152, Ap2b1, adaptor-related protein complex 2, beta 1 subunit, [RH, Score=1257, Expect=0.0]; ENSMUSG00000009090, Ap1b1, adaptor protein complex AP-1, beta 1 subunit, [RH, Score=1252, Expect=0.0]} {Dmel: FBgn0010380, AP-1-2beta, Adaptor Protein complex 1/2, beta subunit, [RH, Score=1250, Expect=0.0]} {Celegans: WBGene00000160, apb-1, AP complex subunit beta, [RH, Score=1162, Expect=0.0]} {Smed: dd_Smed_v6_893_0_1, dd_Smed_v6_893_0_1, [RH, Score=1332, Expect=0.0]} {RNA1509_9305} {RNA1310_2084.1} {RNA815_917.1} Mlig455_028227 {REF} {Length: 3644} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=513.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=204.8]; Beta2-adaptin appendage, C-terminal sub-domain [PF09066.12, score=92.2]; HEAT repeats [PF13646.8, score=61.7]; Adaptin C-terminal domain [PF02883.22, score=42.3]; HEAT repeat [PF02985.24, score=37.7]; Nuclear condensing complex subunits, C-term domain [PF12719.9, score=28.5]; Armadillo/beta-catenin-like repeat [PF00514.25, score=24.1]; TATA-binding protein interacting (TIP20) [PF08623.12, score=23.5]; CLASP N terminal [PF12348.10, score=21.3]} {Human: ENSG00000100280, AP1B1, adaptor related protein complex 1 subunit beta 1, [RH, Score=1258, Expect=0.0]; ENSG00000006125, AP2B1, adaptor related protein complex 2 subunit beta 1, [RH, Score=1258, Expect=0.0]} {Mouse: ENSMUSG00000035152, Ap2b1, adaptor-related protein complex 2, beta 1 subunit, [RH, Score=1256, Expect=0.0]; ENSMUSG00000009090, Ap1b1, adaptor protein complex AP-1, beta 1 subunit, [RH, Score=1255, Expect=0.0]} {Dmel: FBgn0010380, AP-1-2beta, Adaptor Protein complex 1/2, beta subunit, [RH, Score=1253, Expect=0.0]} {Celegans: WBGene00000160, apb-1, AP complex subunit beta, [RH, Score=1169, Expect=0.0]} {Smed: dd_Smed_v6_893_0_1, dd_Smed_v6_893_0_1, [RH, Score=1298, Expect=0.0]} {RNA1509_54397, RNA1509_9305} {RNA1310_2084.1, RNA1509_54397} {RNA1509_54397, RNA815_917.1} |
| 7. | MligTC455_22790 | 8950 | 186.46 | Mlig455_009210 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.204 |
HNRNPK | 1.692 | 0.730 | - | - | - | 0.962 | - | Mlig455_009210 {REF} {Length: 1967} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=98.4]; KH domain [PF07650.19, score=46.7]; KH domain [PF13083.8, score=20.8]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=6e-46]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=5e-47]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=153, Expect=2e-42]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [Score=154, Expect=8e-44]} {Smed: dd_Smed_v6_1998_0_1, dd_Smed_v6_1998_0_1, [RH, Score=163, Expect=3e-46]} {RNA1509_10759, RNA1509_1170} {RNA1310_6557.1, RNA1509_10759, RNA1509_1170} {RNA1509_10759, RNA1509_1170, RNA815_5052.1} |
| 8. | MligTC455_49069 | 3685 | 76.77 | Mlig455_070251 | Neo: - Age: logFC(26M/2M)=0.212 Region-enriched R4: 1.746/0.00071 |
CS | 0.963 | - | - | - | - | 0.963 | - | Mlig455_070251 {REF} {Length: 2221} {TRANSSPLICED} {Pfam: Citrate synthase, C-terminal domain [PF00285.23, score=347.7]} {Human: ENSG00000062485, CS, citrate synthase, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000005683, Cs, citrate synthase, [RH, Score=699, Expect=0.0]; ENSMUSG00000046934, Csl, citrate synthase like, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0261955, kdn, knockdown, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00000833, cts-1, Probable citrate synthase, mitochondrial, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_335_0_1, dd_Smed_v6_335_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_762} {RNA1310_11494.1} {RNA815_3764.1} |
| 9. | MligTC455_50395 | 1278 | 26.61 | Mlig455_011286 | Neo: - Age: - |
MTCH2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_011286 {REF} {Length: 2302} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=44.0]} {Human: ENSG00000109919, MTCH2, mitochondrial carrier 2, [RH, Score=134, Expect=5e-37]; ENSG00000285121, MTCH2, mitochondrial carrier 2, [RH, Score=134, Expect=5e-37]} {Mouse: ENSMUSG00000027282, Mtch2, mitochondrial carrier 2, [RH, Score=133, Expect=8e-37]; ENSMUSG00000111714, Mtch2, mitochondrial carrier 2, [RH, Score=133, Expect=8e-37]} {Dmel: FBgn0027786, Mtch, Mitochondrial carrier homolog 1, [RH, Score=124, Expect=3e-33]} {Celegans: WBGene00018395, mtch-1, MiTochondrial Carrier Homolog, [RH, Score=95.1, Expect=3e-22]} {Smed: dd_Smed_v6_4473_0_1, dd_Smed_v6_4473_0_1, [RH, Score=146, Expect=3e-42]} {RNA1509_13731} {RNA1310_20663.1, RNA1509_13731} {RNA1509_13731, RNA815_6703.1} |
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