M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_35742

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35742 2981 62.11 Mlig455_012742

Neo: -

Age: -

Regeneration-upregulated BL: 1.197

Regeneration-enriched BL: 1.197

 STT3B Mlig455_012742 {REF} {Length: 4048} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=486.2]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1013, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1228, Expect=0.0]} {RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1310_2492.1, RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1509_1360, RNA1509_27001, RNA1509_6993, RNA815_757}

Cumulative graph for MligTC455_35742

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.192 6.124 0.74357 1.00000
RegionR2 -0.268 6.124 0.35908 0.75379
RegionR3 0.007 6.124 0.97427 1.00000
RegionR4 0.306 6.124 0.24651 0.54479
RegionR5 0.721 6.124 0.00039 0.00482
RegionR6 -0.058 6.124 0.80545 1.00000
RegionR7 0.104 6.124 0.71260 1.00000
RegionR8 -0.621 6.124 0.11358 0.62374

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.399 6.124 0.62916 1.00000
RegenerationR2 0.019 6.124 0.94152 1.00000
RegenerationR3 0.205 6.124 0.45829 0.83689
RegenerationR4 -0.106 6.124 0.70022 0.95381
RegenerationR5 -0.145 6.124 0.57112 0.89625
RegenerationR6 0.709 6.124 0.00907 0.11675
RegenerationBL 1.197 6.124 0.00002 0.00126 Specific for BL: 1.197
RegenerationTP -0.09 6.124 0.79861 1.00000


Genes with expression patterns similar to MligTC455_35742

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35742 2981 62.11 Mlig455_012742

Neo: -

Age: -

Regeneration-upregulated BL: 1.197

Regeneration-enriched BL: 1.197

 STT3B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_012742 {REF} {Length: 4048} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=486.2]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1013, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1228, Expect=0.0]} {RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1310_2492.1, RNA1509_1360, RNA1509_27001, RNA1509_6993} {RNA1509_1360, RNA1509_27001, RNA1509_6993, RNA815_757}
2. MligTC455_35741 2900 60.42 Mlig455_012364

Neo: -

Age: -

Regeneration-upregulated BL: 1.183

Regeneration-enriched BL: 1.183

 STT3B 5.812 1.000 0.999 1.000 0.816 0.999 0.998 Mlig455_012364 {REF} {Length: 3138} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=485.9]} {Human: ENSG00000163527, STT3B, STT3B, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1140, Expect=0.0]} {Mouse: ENSMUSG00000032437, Stt3b, STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae), [RH, Score=1132, Expect=0.0]} {Dmel: FBgn0011336, Stt3B, Catalytic subunit 3B of the oligosaccharyltransferase complex, [RH, Score=1081, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [RH, Score=1014, Expect=0.0]} {Smed: dd_Smed_v6_1614_0_1, dd_Smed_v6_1614_0_1, [RH, Score=1231, Expect=0.0]} {RNA1509_1360} {RNA1310_2492.1} {RNA815_757}
3. MligTC455_36269 8027 167.22 Mlig455_050756

Neo: -

Age: -

Regeneration-upregulated BL: 1.078

Regeneration-enriched BL: 1.078

 IDH2 2.566 - - 0.822 - 0.974 0.770 Mlig455_050756 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: Isocitrate/isopropylmalate dehydrogenase [PF00180.22, score=265.3]} {Human: ENSG00000182054, IDH2, isocitrate dehydrogenase (NADP(+)) 2, mitochondrial, [RH, Score=652, Expect=0.0]} {Mouse: ENSMUSG00000030541, Idh2, isocitrate dehydrogenase 2 (NADP+), mitochondrial, [RH, Score=654, Expect=0.0]} {Dmel: FBgn0001248, Idh, Isocitrate dehydrogenase, [Score=565, Expect=0.0]} {Celegans: WBGene00007942, idh-2, Isocitrate dehydrogenase [NADP], [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_449_0_1, dd_Smed_v6_449_0_1, [RH, Score=709, Expect=0.0]} {RNA1509_21570, RNA1509_29846, RNA1509_5723, RNA1509_868} {RNA1310_14357.1, RNA1509_21570, RNA1509_29846, RNA1509_5723, RNA1509_868} {RNA1509_21570, RNA1509_29846, RNA1509_5723, RNA1509_868, RNA815_5294}
4. MligTC455_19409 2981 62.11 Mlig455_056289, Mlig455_056315

Neo: Neoblast

Age: logFC(26M/2M)=0.246

 LSM4 2.564 - 0.830 - - 0.774 0.960

Mlig455_056289 {REF} {Length: 975} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.7]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=164, Expect=3e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]} {Dmel: FBgn0032240, CG17768, [RH, Score=163, Expect=3e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=6e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=113, Expect=7e-33]} {RNA1509_15803, RNA1509_8523} {RNA1310_35821.1, RNA1509_15803, RNA1509_8523} {RNA1509_15803, RNA1509_8523, RNA815_28519}

Mlig455_056315 {REF} {Length: 939} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.9]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=163, Expect=7e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]} {Dmel: FBgn0032240, CG17768, [RH, Score=162, Expect=7e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=7e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=122, Expect=1e-36]} {RNA1509_22792} {RNA1310_35821.1, RNA1509_22792} {RNA1509_22792, RNA815_28519}
5. MligTC455_20882 12754 265.7 Mlig455_031082

Neo: Int S/G2/M

Age: -

 RPS2 2.535 - - - 0.740 0.955 0.840 Mlig455_031082 {REF} {Length: 1126} {TRANSSPLICED} {Pfam: Ribosomal protein S5, C-terminal domain [PF03719.17, score=42.4]; Ribosomal protein S5, N-terminal domain [PF00333.22, score=41.8]} {Human: ENSG00000140988, RPS2, ribosomal protein S2, [Score=205, Expect=3e-65]} {Mouse: ENSMUSG00000044533, Rps2, ribosomal protein S2, [Score=204, Expect=5e-65]} {Dmel: FBgn0004867, RpS2, Ribosomal protein S2, [Score=204, Expect=2e-65]} {Celegans: WBGene00004471, rps-2, 40S ribosomal protein S2, [Score=185, Expect=4e-58]} {Smed: dd_Smed_v6_226_0_1, dd_Smed_v6_226_0_1, [Score=194, Expect=6e-62]} {RNA1509_52682} {RNA1310_28500} {RNA815_12223.1}
6. MligTC455_48228 4552 94.84 Mlig455_014234, Mlig455_014249, Mlig455_044931

Neo: -

Age: -

Region-enriched R5: 1.097/0.00014

Regeneration-upregulated BL: 1.340

Regeneration-enriched BL: 1.340

 TMEM120B 2.422 0.707 - - - 0.974 0.741

Mlig455_014234 {REF} {Length: 2077} {Pfam: TMPIT-like protein [PF07851.15, score=447.4]; Syntaxin [PF00804.27, score=20.7]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [RH, Score=357, Expect=1e-121]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [RH, Score=355, Expect=3e-121]} {Dmel: FBgn0040384, CG32795, [RH, Score=360, Expect=1e-122]} {Celegans: WBGene00019716, M01G5.3, [RH, Score=259, Expect=2e-83]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [RH, Score=376, Expect=1e-129]} {RNA1509_24513, RNA1509_3019, RNA1509_34336} {RNA1310_13709, RNA1509_24513, RNA1509_3019, RNA1509_34336} {RNA1509_24513, RNA1509_3019, RNA1509_34336, RNA815_5133}

Mlig455_014249 {REF} {Length: 2078} {Pfam: TMPIT-like protein [PF07851.15, score=447.4]; Syntaxin [PF00804.27, score=20.7]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [RH, Score=356, Expect=2e-121]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [RH, Score=355, Expect=4e-121]} {Dmel: FBgn0040384, CG32795, [RH, Score=361, Expect=7e-123]} {Celegans: WBGene00019716, M01G5.3, [RH, Score=259, Expect=3e-83]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [RH, Score=376, Expect=1e-129]} {RNA1509_16077} {RNA1310_13709, RNA1509_16077} {RNA1509_16077, RNA815_5133}

Mlig455_044931 {REF} {Length: 1941} {Pfam: TMPIT-like protein [PF07851.15, score=312.6]; Syntaxin [PF00804.27, score=21.1]} {Human: ENSG00000188735, TMEM120B, transmembrane protein 120B, [Score=273, Expect=1e-89]} {Mouse: ENSMUSG00000054434, Tmem120b, transmembrane protein 120B, [Score=273, Expect=2e-89]} {Dmel: FBgn0040384, CG32795, [Score=282, Expect=9e-93]} {Celegans: WBGene00019716, M01G5.3, [Score=195, Expect=4e-59]} {Smed: dd_Smed_v6_3041_0_1, dd_Smed_v6_3041_0_1, [Score=302, Expect=2e-101]} {RNA1509_3019} {RNA1310_13709} {RNA815_5133}
7. MligTC455_32281 5104 106.34 Mlig455_035229

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.269

Regeneration-enriched BL: 1.269

 KHSRP 1.889 - - - 0.924 0.965 - Mlig455_035229 {REF} {Length: 3840} {Pfam: KH domain [PF00013.31, score=212.2]; KH domain [PF07650.19, score=58.3]; KH domain [PF13083.8, score=45.3]; Domain of unknown function (DUF1897) [PF09005.12, score=42.4]; Mitochondrial inner-membrane-bound regulator [PF14611.8, score=23.6]; KH-like RNA-binding domain [PF16005.7, score=21.6]} {Human: ENSG00000088247, KHSRP, KH-type splicing regulatory protein, [Score=228, Expect=2e-64]; ENSG00000107164, FUBP3, far upstream element binding protein 3, [Score=221, Expect=4e-63]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [Score=231, Expect=4e-67]; ENSMUSG00000007670, Khsrp, KH-type splicing regulatory protein, [Score=229, Expect=5e-65]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [Score=139, Expect=7e-34]} {Celegans: WBGene00022738, ZK418.9, [Score=168, Expect=5e-45]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [Score=171, Expect=1e-45]} {RNA1509_15246} {RNA1310_2973} {RNA815_6833}
8. MligTC455_26985 11727 244.31 Mlig455_067101

Neo: -

Age: logFC(26M/2M)=-0.405

 1.756 - - - 0.796 0.960 - Mlig455_067101 {REF} {Length: 1375} {RNA1509_18861} {RNA1310_20071} {RNA815_8472}
9. MligTC455_15581 1342 27.96 Mlig455_031393

Neo: Int S/G2/M

Age: -

 SPCS1 1.718 - - - - 0.954 0.764 Mlig455_031393 {REF} {Length: 1285} {TRANSSPLICED} {Pfam: Microsomal signal peptidase 12 kDa subunit (SPC12) [PF06645.15, score=95.5]} {Human: ENSG00000114902, SPCS1, signal peptidase complex subunit 1, [RH, Score=94.7, Expect=3e-26]} {Mouse: ENSMUSG00000021917, Spcs1, signal peptidase complex subunit 1 homolog (S. cerevisiae), [RH, Score=92.0, Expect=2e-25]} {Dmel: FBgn0040623, Spase12, Spase 12-subunit, [RH, Score=102, Expect=2e-29]} {Smed: dd_Smed_v6_992_0_1, dd_Smed_v6_992_0_1, [RH, Score=101, Expect=3e-29]} {RNA1509_17670, RNA1509_18225, RNA1509_43703} {RNA1310_29206.1, RNA1509_17670, RNA1509_18225, RNA1509_43703} {RNA1509_17670, RNA1509_18225, RNA1509_43703, RNA815_35021}
10. MligTC455_44202 781 16.28 Mlig455_025288

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.651

Region-enriched R4: 1.041/0.01600

 BCKDHA 1.703 - - - - 0.748 0.955 Mlig455_025288 {REF} {Length: 2205} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=305.3]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=22.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=21.2]} {Human: ENSG00000248098, BCKDHA, branched chain keto acid dehydrogenase E1, alpha polypeptide, [RH, Score=501, Expect=5e-176]; ENSG00000255730, AC011462.1, novel protein, [RH, Score=499, Expect=1e-174]} {Mouse: ENSMUSG00000060376, Bckdha, branched chain ketoacid dehydrogenase E1, alpha polypeptide, [RH, Score=503, Expect=4e-177]} {Dmel: FBgn0037709, CG8199, [RH, Score=458, Expect=9e-160]} {Celegans: WBGene00012713, bckd-1A, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, [RH, Score=481, Expect=6e-169]} {Smed: dd_Smed_v6_3288_0_1, dd_Smed_v6_3288_0_1, [RH, Score=488, Expect=7e-172]} {RNA1509_21323} {RNA1310_8924.1} {RNA815_7812}
11. MligTC455_39440 1122 23.36 Mlig455_018887

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.697

 GGA1 1.702 - - - - 0.745 0.957 Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1}
12. MligTC455_26699 3278 68.29 Mlig455_009201

Neo: -

Age: logFC(26M/2M)=0.301

Region-enriched R5: 1.144/0.00000

 RPN2 1.686 - 0.731 - - 0.955 - Mlig455_009201 {REF} {Length: 4178} {TRANSSPLICED} {Pfam: Oligosaccharyltransferase subunit Ribophorin II [PF05817.16, score=571.7]} {Human: ENSG00000118705, RPN2, ribophorin II, [RH, Score=309, Expect=7e-96]} {Mouse: ENSMUSG00000027642, Rpn2, ribophorin II, [RH, Score=305, Expect=2e-94]} {Dmel: FBgn0034277, OstDelta, Oligosaccharide transferase Delta subunit, [RH, Score=296, Expect=3e-91]} {Celegans: WBGene00019693, ostd-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, [RH, Score=177, Expect=1e-50]} {Smed: dd_Smed_v6_538_0_1, dd_Smed_v6_538_0_1, [RH, Score=318, Expect=1e-99]} {RNA1509_28606, RNA1509_5691, RNA1509_5900, RNA1509_59766, RNA1509_8958} {RNA1310_8527.1, RNA1509_28606, RNA1509_5691, RNA1509_5900, RNA1509_59766} {RNA1509_28606, RNA1509_5691, RNA1509_5900, RNA1509_59766, RNA815_2829}
13. MligTC455_16797 968 20.16 Mlig455_053775

Neo: -

Age: -

 SEC23A 1.683 - - - - 0.720 0.963 Mlig455_053775 {REF} {Length: 2981} {TRANSSPLICED} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=231.0]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=106.8]; Sec23/Sec24 helical domain [PF04815.17, score=91.7]; Sec23/Sec24 zinc finger [PF04810.17, score=47.0]; Gelsolin repeat [PF00626.24, score=36.3]} {Human: ENSG00000100934, SEC23A, Sec23 homolog A, coat complex II component, [RH, Score=1068, Expect=0.0]; ENSG00000101310, SEC23B, Sec23 homolog B, coat complex II component, [RH, Score=1058, Expect=0.0]} {Mouse: ENSMUSG00000020986, Sec23a, SEC23 homolog A, COPII coat complex component, [RH, Score=1066, Expect=0.0]; ENSMUSG00000027429, Sec23b, SEC23 homolog B, COPII coat complex component, [RH, Score=1060, Expect=0.0]} {Dmel: FBgn0262125, Sec23, Secretory 23, [RH, Score=1050, Expect=0.0]} {Celegans: WBGene00004754, sec-23, Yeast SEC homolog, [RH, Score=852, Expect=0.0]} {Smed: dd_Smed_v6_778_0_1, dd_Smed_v6_778_0_1, [RH, Score=926, Expect=0.0]} {RNA1509_1826, RNA1509_18391, RNA1509_28898} {RNA1310_7572.1, RNA1509_1826, RNA1509_18391, RNA1509_28898} {RNA1509_1826, RNA1509_18391, RNA1509_28898, RNA815_3891.1}
14. MligTC455_37094 4505 93.86 Mlig455_004071

Neo: Neoblast

Age: -

 YBX3 0.958 - - - - - 0.958 Mlig455_004071 {REF} {Length: 2100} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=91.3]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=154, Expect=6e-45]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=156, Expect=5e-46]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=145, Expect=2e-41]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=148, Expect=4e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=159, Expect=8e-47]} {RNA1509_13488, RNA1509_739} {RNA1310_16468, RNA1509_13488, RNA1509_739} {RNA1509_13488, RNA1509_739, RNA815_7629.1}
15. MligTC455_46359 1639 34.15 Mlig455_002958

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.308

Region-enriched R5: 1.054/0.00491

 RAE1 0.955 - - - - - 0.955 Mlig455_002958 {REF} {Length: 1300} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=43.4]} {Human: ENSG00000101146, RAE1, ribonucleic acid export 1, [RH, Score=397, Expect=2e-137]} {Mouse: ENSMUSG00000027509, Rae1, ribonucleic acid export 1, [RH, Score=392, Expect=9e-136]} {Dmel: FBgn0034646, Rae1, [RH, Score=405, Expect=1e-141]} {Celegans: WBGene00003803, rae-1, mRNA export factor rae-1, [RH, Score=353, Expect=7e-121]} {Smed: dd_Smed_v6_3456_0_1, dd_Smed_v6_3456_0_1, [RH, Score=389, Expect=4e-135]} {RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1310_24271, RNA1509_12434, RNA1509_33157, RNA1509_55930} {RNA1509_12434, RNA1509_33157, RNA1509_55930, RNA815_11521}
16. MligTC455_49625 1156 24.09 Mlig455_060365

Neo: -

Age: -

 ZFR2 0.954 - - - - - 0.954 Mlig455_060365 {REF} {Length: 2416} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=73.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=37.3]; SF3a60/Prp9 C-terminal [PF11931.10, score=24.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.2]} {Human: ENSG00000105278, ZFR2, zinc finger RNA binding protein 2, [Score=51.6, Expect=2e-06]; ENSG00000161642, ZNF385A, zinc finger protein 385A, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000000552, Zfp385a, zinc finger protein 385A, [Score=50.4, Expect=4e-06]} {RNA1509_54420} {RNA1310_18764} {RNA815_3566}
17. MligTC455_21282 8651 180.24 Mlig455_044920

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.342

 RPLP0 0.953 - - - - 0.953 - Mlig455_044920 {REF} {Length: 1081} {TRANSSPLICED} {Pfam: Proline-rich membrane anchor 1 [PF16101.7, score=23.3]} {Human: ENSG00000089157, RPLP0, ribosomal protein lateral stalk subunit P0, [Score=83.6, Expect=4e-19]} {Mouse: ENSMUSG00000067274, Rplp0, ribosomal protein, large, P0, [Score=79.7, Expect=1e-17]} {Dmel: FBgn0000100, RpLP0, Ribosomal protein LP0, [Score=73.2, Expect=2e-15]} {Celegans: WBGene00004408, rla-0, 60S acidic ribosomal protein P0, [Score=65.9, Expect=7e-13]} {Smed: dd_Smed_v6_161_0_1, dd_Smed_v6_161_0_1, [Score=62.0, Expect=1e-11]} {RNA1509_3237} {RNA1310_32762} {RNA815_14801}
18. MligTC455_49069 3685 76.77 Mlig455_070251

Neo: -

Age: logFC(26M/2M)=0.212

Region-enriched R4: 1.746/0.00071

 CS 0.953 - - - - 0.953 - Mlig455_070251 {REF} {Length: 2221} {TRANSSPLICED} {Pfam: Citrate synthase, C-terminal domain [PF00285.23, score=347.7]} {Human: ENSG00000062485, CS, citrate synthase, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000005683, Cs, citrate synthase, [RH, Score=699, Expect=0.0]; ENSMUSG00000046934, Csl, citrate synthase like, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0261955, kdn, knockdown, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00000833, cts-1, Probable citrate synthase, mitochondrial, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_335_0_1, dd_Smed_v6_335_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_762} {RNA1310_11494.1} {RNA815_3764.1}
19. MligTC455_43357 5168 107.67 Mlig455_002141, Mlig455_002241

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.509

Region-enriched R4: 1.768/0.00020
Region-enriched R5: 1.280/0.00144

 PSMD8 0.951 - - - - - 0.951

Mlig455_002141 {REF} {Length: 1829} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=103.4]; SAC3/GANP family [PF03399.18, score=30.2]} {Human: ENSG00000099341, PSMD8, proteasome 26S subunit, non-ATPase 8, [RH, Score=253, Expect=9e-84]} {Mouse: ENSMUSG00000030591, Psmd8, proteasome (prosome, macropain) 26S subunit, non-ATPase, 8, [RH, Score=253, Expect=7e-84]} {Dmel: FBgn0028693, Rpn12, Regulatory particle non-ATPase 12, [RH, Score=183, Expect=7e-57]} {Celegans: WBGene00004468, rpn-12, 26S proteasome non-ATPase regulatory subunit 8, [RH, Score=144, Expect=5e-42]} {Smed: dd_Smed_v6_3245_0_1, dd_Smed_v6_3245_0_1, [RH, Score=260, Expect=3e-87]} {RNA1509_23389, RNA1509_48825} {RNA1310_23734.1, RNA1509_23389, RNA1509_48825} {RNA1509_23389, RNA1509_48825, RNA815_12419}

Mlig455_002241 {REF} {Length: 1266} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=103.4]; SAC3/GANP family [PF03399.18, score=30.2]} {Human: ENSG00000099341, PSMD8, proteasome 26S subunit, non-ATPase 8, [RH, Score=253, Expect=9e-84]} {Mouse: ENSMUSG00000030591, Psmd8, proteasome (prosome, macropain) 26S subunit, non-ATPase, 8, [RH, Score=253, Expect=7e-84]} {Dmel: FBgn0028693, Rpn12, Regulatory particle non-ATPase 12, [RH, Score=183, Expect=7e-57]} {Celegans: WBGene00004468, rpn-12, 26S proteasome non-ATPase regulatory subunit 8, [RH, Score=144, Expect=5e-42]} {Smed: dd_Smed_v6_3245_0_1, dd_Smed_v6_3245_0_1, [RH, Score=260, Expect=3e-87]} {RNA1509_23389} {RNA1310_23734.1} {RNA815_12419}
20. MligTC455_25691 646 13.46 Mlig455_038164, Mlig455_038289

Neo: -

Age: Up-Up-Down

 WDR76 0.95 - - - - - 0.950

Mlig455_038164 {REF} {Length: 4321} {Pfam: WD domain, G-beta repeat [PF00400.34, score=21.9]} {Human: ENSG00000092470, WDR76, WD repeat domain 76, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000027242, Wdr76, WD repeat domain 76, [RH, Score=145, Expect=5e-37]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=50.4, Expect=2e-06]} {RNA1509_15398, RNA1509_40318} {RNA1310_8982, RNA1509_15398} {RNA1509_15398, RNA815_5022}

Mlig455_038289 {REF} {Length: 6507} {Pfam: WD domain, G-beta repeat [PF00400.34, score=22.0]} {Human: ENSG00000092470, WDR76, WD repeat domain 76, [RH, Score=132, Expect=3e-32]} {Mouse: ENSMUSG00000027242, Wdr76, WD repeat domain 76, [RH, Score=145, Expect=1e-36]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=50.4, Expect=3e-06]} {RNA1509_40318} {RNA1310_8982} {RNA815_5022}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA