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Results for MligTC455_32340

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32340 117 2.43 Mlig455_056560

Neo: Irradiation

Age: Up-Down-Up

 SLC37A2 Mlig455_056560 {REF} {Length: 5926} {Pfam: Major Facilitator Superfamily [PF07690.18, score=130.1]; Calponin homology (CH) domain [PF00307.33, score=87.8]; CAMSAP CH domain [PF11971.10, score=23.8]} {Human: ENSG00000134955, SLC37A2, solute carrier family 37 member 2, [Score=488, Expect=6e-160]} {Mouse: ENSMUSG00000032122, Slc37a2, solute carrier family 37 (glycerol-3-phosphate transporter), member 2, [Score=493, Expect=8e-162]; ENSMUSG00000024036, Slc37a1, solute carrier family 37 (glycerol-3-phosphate transporter), member 1, [Score=473, Expect=1e-153]} {Dmel: FBgn0034611, MFS16, Major Facilitator Superfamily Transporter 16, [Score=441, Expect=8e-142]} {Celegans: WBGene00011718, T11G6.3, [Score=181, Expect=6e-49]} {Smed: dd_Smed_v6_8095_0_1, dd_Smed_v6_8095_0_1, [RH, Score=483, Expect=7e-158]} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}

Cumulative graph for MligTC455_32340

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.162 1.988 0.93100 1.00000
RegionR2 1.238 1.988 0.14291 0.47054
RegionR3 0.15 1.988 0.79782 1.00000
RegionR4 -1.385 1.988 0.10426 0.31620
RegionR5 0.283 1.988 0.58591 0.94454
RegionR6 0.057 1.988 0.92312 1.00000
RegionR7 -1.649 1.988 0.17562 0.76916
RegionR8 1.143 1.988 0.23797 0.85454

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.064 1.988 0.50982 1.00000
RegenerationR2 -0.31 1.988 0.63879 0.93083
RegenerationR3 0.547 1.988 0.45265 0.83293
RegenerationR4 0.734 1.988 0.38511 0.80449
RegenerationR5 -0.095 1.988 0.89955 1.00000
RegenerationR6 0.552 1.988 0.49247 0.80070
RegenerationBL 0.489 1.988 0.68303 1.00000
RegenerationTP -0.121 1.988 0.93675 1.00000


Genes with expression patterns similar to MligTC455_32340

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32340 117 2.43 Mlig455_056560

Neo: Irradiation

Age: Up-Down-Up

 SLC37A2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056560 {REF} {Length: 5926} {Pfam: Major Facilitator Superfamily [PF07690.18, score=130.1]; Calponin homology (CH) domain [PF00307.33, score=87.8]; CAMSAP CH domain [PF11971.10, score=23.8]} {Human: ENSG00000134955, SLC37A2, solute carrier family 37 member 2, [Score=488, Expect=6e-160]} {Mouse: ENSMUSG00000032122, Slc37a2, solute carrier family 37 (glycerol-3-phosphate transporter), member 2, [Score=493, Expect=8e-162]; ENSMUSG00000024036, Slc37a1, solute carrier family 37 (glycerol-3-phosphate transporter), member 1, [Score=473, Expect=1e-153]} {Dmel: FBgn0034611, MFS16, Major Facilitator Superfamily Transporter 16, [Score=441, Expect=8e-142]} {Celegans: WBGene00011718, T11G6.3, [Score=181, Expect=6e-49]} {Smed: dd_Smed_v6_8095_0_1, dd_Smed_v6_8095_0_1, [RH, Score=483, Expect=7e-158]} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}
2. MligTC455_31549 166 3.46 Mlig455_017506, Mlig455_017512, Mlig455_019283

Neo: -

Age: Up-Down-Down

 PDLIM3 0.976 - - - 0.976 - -

Mlig455_017506 {REF} {Length: 2965} {Pfam: PDZ domain [PF00595.26, score=42.4]; PDZ domain [PF17820.3, score=27.9]} {Human: ENSG00000154553, PDLIM3, PDZ and LIM domain 3, [Score=62.4, Expect=7e-10]; ENSG00000107438, PDLIM1, PDZ and LIM domain 1, [Score=59.7, Expect=7e-09]} {Mouse: ENSMUSG00000031636, Pdlim3, PDZ and LIM domain 3, [Score=63.2, Expect=3e-10]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=47.8, Expect=1e-05]} {RNA1509_26962} {RNA1310_7020.1} {RNA815_25140}

Mlig455_017512 {REF} {Length: 2755} {RNA1509_26962} {RNA1310_7663} {RNA815_9340}

Mlig455_019283 {REF} {Length: 179} {Pfam: PDZ domain [PF00595.26, score=26.5]; PDZ domain [PF17820.3, score=23.2]} {RNA1509_26962} {RNA1310_7020.1} {RNA815_43850}
3. MligTC455_52848 1004 20.93 Mlig455_018091

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 1.394/0.01138

Regeneration-upregulated BL: 1.617

Regeneration-enriched BL: 1.617

 TRIP12 0.956 - - - - - 0.956 Mlig455_018091 {REF} {Length: 8229} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=254.0]; WWE domain [PF02825.22, score=52.4]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=386, Expect=1e-107]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=379, Expect=7e-106]} {Dmel: FBgn0260794, ctrip, circadian trip, [Score=294, Expect=2e-79]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=232, Expect=9e-61]} {Smed: dd_Smed_v6_2525_0_2, dd_Smed_v6_2525_0_2, [Score=334, Expect=4e-92]} {RNA1509_25029, RNA1509_54642, RNA1509_8128} {RNA1310_1316.1, RNA1509_25029, RNA1509_54642} {RNA1509_25029, RNA1509_54642, RNA815_9388}
4. MligTC455_33645 360 7.5 Mlig455_039156

Neo: -

Age: -

 RBBP6 0.951 - - - - - 0.951 Mlig455_039156 {REF} {Length: 5326} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=60.2]; Zinc knuckle [PF13696.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [RH, Score=208, Expect=1e-53]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [RH, Score=203, Expect=3e-52]} {Dmel: FBgn0086129, snama, something that sticks like glue, [RH, Score=139, Expect=6e-33]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [RH, Score=141, Expect=1e-33]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [RH, Score=219, Expect=1e-58]} {RNA1509_12243} {RNA1310_5249, RNA1509_12243} {RNA1509_12243, RNA815_11810}

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