Data search


search
Exact
Search

Results for MligTC455_32356

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32356 6 0.12 Mlig455_009582

Neo: -

Age: -

Mlig455_009582 {REF} {Length: 238} {NoTransDecoderORF}

Cumulative graph for MligTC455_32356

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_32356

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32356 6 0.12 Mlig455_009582

Neo: -

Age: -

2 - - - 1.000 - 1.000 Mlig455_009582 {REF} {Length: 238} {NoTransDecoderORF}
2. MligTC455_21573 21 0.44 Mlig455_017688, Mlig455_017738

Neo: -

Age: Up-Down-Down

DICER1 1.787 - - - 0.952 - 0.835

Mlig455_017688 {REF} {Length: 5768} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=321.1]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [Score=177, Expect=3e-44]} {RNA1509_6090} {RNA1310_444} {RNA815_30079}

Mlig455_017738 {REF} {Length: 11721} {TRANSSPLICED} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=399.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.4]; Helicase conserved C-terminal domain [PF00271.33, score=63.2]; DEAD/DEAH box helicase [PF00270.31, score=46.5]; Integrase core domain [PF00665.28, score=45.0]; Integrase zinc binding domain [PF17921.3, score=41.9]; Type III restriction enzyme, res subunit [PF04851.17, score=40.8]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=99.8, Expect=1e-19]; ENSG00000108771, DHX58, DExH-box helicase 58, [Score=95.5, Expect=9e-19]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=99.8, Expect=7e-20]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=95.5, Expect=1e-18]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=3e-54]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=121, Expect=5e-29]} {RNA1509_6090} {RNA1310_444} {RNA815_10889}
3. MligTC455_08183 4 0.08 Mlig455_066960

Neo: -

Age: -

1 - - - 1.000 - - Mlig455_066960 {REF} {Length: 789} {RNA1310_59548}
4. MligTC455_13583 31 0.64 Mlig455_052529, Mlig455_069099

Neo: -

Age: -

0.998 - - - 0.998 - -

Mlig455_052529 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802}

Mlig455_069099 {REF} {Length: 381} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802}
5. MligTC455_10617 423 8.82 Mlig455_023363, Mlig455_068941

Neo: Irradiation

Age: -

Region-specific R4: 6.593

Region-enriched R4: 3.320/0.01596

0.996 - - - 0.996 - -

Mlig455_023363 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}

Mlig455_068941 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}
6. MligTC455_30807 57 1.2 Mlig455_030943, Mlig455_030945

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.458

0.992 - - - 0.992 - -

Mlig455_030943 {REF} {Length: 2216} {RNA1509_31134} {RNA1310_18884.1} {RNA815_7642.1}

Mlig455_030945 {REF} {Length: 1726} {RNA1509_31134} {RNA1310_18884.1} {RNA815_7642.1}
7. MligTC455_46701 138 2.87 Mlig455_056693

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.197

Region-enriched R4: 5.130/0.00000

Regeneration-downregulated R4: -3.046

Regeneration-depleted R4: -3.046

WSCD2 0.99 - - - 0.990 - - Mlig455_056693 {REF} {Length: 1234} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=76.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.9, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=50.1, Expect=8e-07]} {RNA1509_13599} {RNA1310_24400} {RNA815_17032}
8. MligTC455_16121 35 0.72 Mlig455_015845

Neo: -

Age: -

0.978 - - - - - 0.978 Mlig455_015845 {REF} {Length: 839} {RNA1509_6728} {RNA1310_56025} {RNA815_35015}
9. MligTC455_04599 201 4.19 Mlig455_025453

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 5.949

Region-enriched R4: 4.303/0.00000

Regeneration-downregulated R4: -2.544

Regeneration-depleted R4: -2.544

0.977 - - - 0.977 - - Mlig455_025453 {REF} {Length: 811} {NoTransDecoderORF} {RNA1509_20308} {RNA1310_65417, RNA1509_20308} {RNA1509_20308, RNA815_38053}
10. MligTC455_17290 80 1.66 Mlig455_045654

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.676

Region-enriched R4: 3.109/0.01782

0.976 - - - 0.976 - - Mlig455_045654 {REF} {Length: 2037} {Pfam: Outer membrane protein (OmpH-like) [PF03938.16, score=19.1]} {RNA1509_31195, RNA1509_49014} {RNA1310_15853.1, RNA1509_49014} {RNA1509_49014, RNA815_11413}
11. MligTC455_09797 12 0.25 Mlig455_048651

Neo: -

Age: -

0.974 - - - 0.974 - - Mlig455_048651 {REF} {Length: 1006} {NoTransDecoderORF}
12. MligTC455_01408 7 0.15 Mlig455_014355

Neo: -

Age: -

0.973 - - - 0.973 - - Mlig455_014355 {REF} {Length: 614}
13. MligTC455_12025 32 0.66 Mlig455_017859

Neo: Germline

Age: -

Region-enriched R4: 4.478/0.00166

0.97 - - - 0.970 - - Mlig455_017859 {REF} {Length: 829} {TRANSSPLICED} {RNA1509_26263} {RNA1310_30890, RNA1509_26263} {RNA1509_26263, RNA815_15531}
14. MligTC455_13857 12 0.24 Mlig455_000132

Neo: -

Age: -

0.97 - - - 0.970 - - Mlig455_000132 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_30577} {RNA1310_36670.1} {RNA815_18763.1}
15. MligTC455_05558 34 0.71 Mlig455_019821

Neo: -

Age: logFC(26M/2M)=0.687

Region-enriched R4: 5.756/0.00061

0.967 - - - 0.967 - - Mlig455_019821 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1310_35019} {RNA815_8697}
16. MligTC455_06310 10 0.2 Mlig455_032477

Neo: -

Age: -

0.967 - - - 0.967 - - Mlig455_032477 {REF} {Length: 1757} {NoTransDecoderORF} {RNA1509_29098} {RNA1310_30738} {RNA815_12857}
17. MligTC455_30413 27 0.56 Mlig455_047058

Neo: -

Age: -

Region-enriched R3: 3.838/0.04870

ANKRD44 0.967 - - - - - 0.967 Mlig455_047058 {REF} {Length: 2058} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=42.7]; Ankyrin repeats (many copies) [PF13637.8, score=31.2]; Ankyrin repeat [PF13606.8, score=28.4]; Ankyrin repeat [PF00023.32, score=27.7]; Ankyrin repeats (many copies) [PF13857.8, score=27.6]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=50.1, Expect=3e-07]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=44.3, Expect=1e-05]} {Smed: dd_Smed_v6_10615_0_1, dd_Smed_v6_10615_0_1, [Score=45.1, Expect=4e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_10088.2}
18. MligTC455_46660 319 6.65 Mlig455_029098, Mlig455_029118

Neo: -

Age: -

TPCN1 0.967 - - - 0.967 - -

Mlig455_029098 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=111.5]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [Score=167, Expect=2e-42]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [Score=176, Expect=5e-46]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [Score=65.5, Expect=1e-10]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [Score=169, Expect=6e-44]} {RNA1509_51248} {RNA1310_6971.3} {RNA815_6160}

Mlig455_029118 {REF} {Length: 3351} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=165.9]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [RH, Score=197, Expect=2e-52]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [RH, Score=207, Expect=5e-56]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=73.6, Expect=6e-13]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=67.4, Expect=3e-11]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [RH, Score=229, Expect=2e-64]} {RNA1509_51248} {RNA1310_6971.1, RNA1509_51248} {RNA1509_51248, RNA815_6160}
19. MligTC455_22500 18 0.38 Mlig455_028084

Neo: Germline

Age: -

0.966 - - - - - 0.966 Mlig455_028084 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_35014} {RNA1310_23792} {RNA815_57666}
20. MligTC455_54225 2 0.05 Mlig455_049552

Neo: -

Age: -

0.963 - - - - - 0.963 Mlig455_049552 {REF} {Length: 620} {NoTransDecoderORF} {RNA1310_19572}
21. MligTC455_06521 34 0.7 Mlig455_004743

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_004743 {REF} {Length: 2830} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_59242} {RNA815_47099}
22. MligTC455_44741 15 0.31 Mlig455_058956

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_058956 {REF} {Length: 1823} {Pfam: Caspase domain [PF00656.24, score=30.6]} {RNA1509_48421} {RNA1310_20861} {RNA815_10446}
23. MligTC455_43708 25 0.52 Mlig455_064598

Neo: -

Age: -

0.961 - - - 0.961 - - Mlig455_064598 {REF} {Length: 1211} {Pfam: UPF0506 [PF11703.10, score=23.8]} {RNA1509_15141, RNA1509_51298} {RNA1310_54828.1, RNA1509_15141} {RNA1509_15141, RNA815_44192}
24. MligTC455_19803 48 1 Mlig455_020073, Mlig455_040876, Mlig455_066459, Mlig455_066460

Neo: -

Age: -

KREMEN1, KREMEN2 0.959 - - - 0.959 - -

Mlig455_020073 {REF} {Length: 1139} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_040876 {REF} {Length: 898} {Pfam: WSC domain [PF01822.21, score=61.5]; PAN domain [PF00024.28, score=19.4]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=48.1, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=63.9, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=9e-06]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_066459 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_066460 {REF} {Length: 2320} {Pfam: WSC domain [PF01822.21, score=57.3]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}
25. MligTC455_16851 46 0.97 Mlig455_056346

Neo: -

Age: logFC(26M/2M)=-0.501

EDIL3 0.958 - - - - - 0.958 Mlig455_056346 {REF} {Length: 1807} {Pfam: F5/8 type C domain [PF00754.27, score=158.8]} {Human: ENSG00000164176, EDIL3, EGF like repeats and discoidin domains 3, [Score=123, Expect=8e-30]} {Mouse: ENSMUSG00000030605, Mfge8, milk fat globule-EGF factor 8 protein, [Score=121, Expect=1e-29]; ENSMUSG00000034488, Edil3, EGF-like repeats and discoidin I-like domains 3, [Score=121, Expect=3e-29]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [Score=73.2, Expect=3e-13]} {Celegans: WBGene00016104, ddr-1, Discoidin domain-containing receptor A, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_5463_0_1, dd_Smed_v6_5463_0_1, [Score=345, Expect=2e-112]} {RNA1509_46776} {RNA1310_14217} {RNA815_1790.1}
26. MligTC455_34539 68 1.42 Mlig455_065631

Neo: -

Age: Down-Down-Up

0.957 - - - 0.957 - - Mlig455_065631 {REF} {Length: 2069} {Pfam: Immunoglobulin domain [PF13927.8, score=34.0]; Immunoglobulin I-set domain [PF07679.18, score=26.7]; Immunoglobulin domain [PF00047.27, score=25.6]; Immunoglobulin domain [PF13895.8, score=23.9]} {RNA1509_31635} {RNA1310_20892.1} {RNA815_37895}
27. MligTC455_14917 71 1.49 Mlig455_035669, Mlig455_035765

Neo: -

Age: -

ADRA1A 0.954 - - - 0.954 - -

Mlig455_035669 {REF} {Length: 1803} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=108.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=42.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.2]; Serpentine type 7TM GPCR chemoreceptor Srz [PF10325.11, score=21.2]; Olfactory receptor [PF13853.8, score=20.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=83.2, Expect=1e-16]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=85.1, Expect=1e-17]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=84.7, Expect=3e-17]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=84.0, Expect=4e-17]} {Dmel: FBgn0038874, ETHR, [Score=115, Expect=4e-28]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=76.6, Expect=5e-15]} {Smed: dd_Smed_v6_18312_0_1, dd_Smed_v6_18312_0_1, [Score=73.2, Expect=6e-14]} {RNA1310_81509} {RNA815_63181}

Mlig455_035765 {REF} {Length: 1803} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=108.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=42.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.2]; Serpentine type 7TM GPCR chemoreceptor Srz [PF10325.11, score=21.2]; Olfactory receptor [PF13853.8, score=20.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=82.8, Expect=1e-16]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=80.1, Expect=1e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=86.3, Expect=5e-18]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=84.3, Expect=4e-17]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=83.6, Expect=5e-17]} {Dmel: FBgn0038874, ETHR, [Score=115, Expect=5e-28]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=76.3, Expect=6e-15]} {Smed: dd_Smed_v6_18312_0_1, dd_Smed_v6_18312_0_1, [Score=72.0, Expect=1e-13]} {RNA1310_81509} {RNA815_63181}
28. MligTC455_16281 159 3.31 Mlig455_042437, Mlig455_042488

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.300

Region-specific R4: 6.491

Region-enriched R4: 3.498/0.00088

0.954 - - - 0.954 - -

Mlig455_042437 {REF} {Length: 3615} {Pfam: Immunoglobulin domain [PF13927.8, score=19.8]; Immunoglobulin domain [PF13895.8, score=19.0]} {RNA1509_17265} {RNA1310_8841.1, RNA1509_17265} {RNA1509_17265, RNA815_10658}

Mlig455_042488 {REF} {Length: 2996} {Pfam: Immunoglobulin domain [PF13927.8, score=20.0]; Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 [PF12496.10, score=19.2]; Immunoglobulin domain [PF13895.8, score=19.1]} {RNA1509_17265} {RNA1310_8841.1} {RNA815_10658}
29. MligTC455_46718 160 3.32 Mlig455_036595

Neo: -

Age: Down-Up-Down

FMO4 0.954 - - - 0.954 - - Mlig455_036595 {REF} {Length: 1175} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=114.5]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=38.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=20.6]} {Human: ENSG00000076258, FMO4, flavin containing monooxygenase 4, [Score=79.3, Expect=4e-15]} {Mouse: ENSMUSG00000026692, Fmo4, flavin containing monooxygenase 4, [Score=77.0, Expect=1e-14]; ENSMUSG00000040181, Fmo1, flavin containing monooxygenase 1, [Score=74.7, Expect=7e-15]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=138, Expect=7e-36]} {Celegans: WBGene00016728, C46H11.2, Flavin-containing monooxygenase, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_9449_0_1, dd_Smed_v6_9449_0_1, [Score=88.6, Expect=8e-19]} {RNA1509_17648} {RNA1310_15196.2} {RNA815_5427}
30. MligTC455_17905 18 0.38 Mlig455_041409

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_041409 {REF} {Length: 1032} {RNA1310_47367}
31. MligTC455_51366 50 1.04 Mlig455_041767

Neo: Germline

Age: -

Region-enriched R4: 4.225/0.01747

0.952 - - - 0.952 - - Mlig455_041767 {REF} {Length: 1284} {RNA1509_35747} {RNA1310_51509, RNA1509_35747} {RNA1509_35747, RNA815_31599}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA