TomoSeq data search

Data search

Results for MligTC455_46718

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46718

160

3.32

Mlig455_036595

Neo: -

Age: Down-Up-Down

FMO4

Mlig455_036595 {REF} {Length: 1175} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=114.5]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=38.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=20.6]} {Human: ENSG00000076258, FMO4, flavin containing monooxygenase 4, [Score=79.3, Expect=4e-15]} {Mouse: ENSMUSG00000026692, Fmo4, flavin containing monooxygenase 4, [Score=77.0, Expect=1e-14]; ENSMUSG00000040181, Fmo1, flavin containing monooxygenase 1, [Score=74.7, Expect=7e-15]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=138, Expect=7e-36]} {Celegans: WBGene00016728, C46H11.2, Flavin-containing monooxygenase, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_9449_0_1, dd_Smed_v6_9449_0_1, [Score=88.6, Expect=8e-19]} {RNA1509_17648} {RNA1310_15196.2} {RNA815_5427}

Cumulative graph for MligTC455_46718

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.802	2.56	0.44219	1.00000
RegionR2	-1.157	2.56	0.34442	0.73695
RegionR3	1.118	2.56	0.16389	0.68441
RegionR4	-0.579	2.56	0.57976	0.89654
RegionR5	0.514	2.56	0.50280	0.86606
RegionR6	2.07	2.56	0.00688	0.13364
RegionR7	0.366	2.56	0.71438	1.00000
RegionR8	-0.53	2.56	0.75320	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.119	2.56	0.63946	1.00000
RegenerationR2	0.564	2.56	0.62856	0.92654
RegenerationR3	-1.229	2.56	0.21911	0.65535
RegenerationR4	0.109	2.56	0.91335	1.00000
RegenerationR5	-0.954	2.56	0.30291	0.73026
RegenerationR6	-1.512	2.56	0.16203	0.49125
RegenerationBL	-5.444	2.56	0.02837	0.18711
RegenerationTP	0.268	2.56	0.85072	1.00000

Genes with expression patterns similar to MligTC455_46718

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46718	160	3.32	Mlig455_036595	Neo: - Age: Down-Up-Down	FMO4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036595 {REF} {Length: 1175} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=114.5]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=38.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=20.6]} {Human: ENSG00000076258, FMO4, flavin containing monooxygenase 4, [Score=79.3, Expect=4e-15]} {Mouse: ENSMUSG00000026692, Fmo4, flavin containing monooxygenase 4, [Score=77.0, Expect=1e-14]; ENSMUSG00000040181, Fmo1, flavin containing monooxygenase 1, [Score=74.7, Expect=7e-15]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=138, Expect=7e-36]} {Celegans: WBGene00016728, C46H11.2, Flavin-containing monooxygenase, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_9449_0_1, dd_Smed_v6_9449_0_1, [Score=88.6, Expect=8e-19]} {RNA1509_17648} {RNA1310_15196.2} {RNA815_5427}
2.	MligTC455_35851	84	1.74	Mlig455_060481	Neo: - Age: -		1.842	-	-	0.883	-	-	0.959	Mlig455_060481 {REF} {Length: 2116} {RNA1509_15445} {RNA1310_19911} {RNA815_6089}
3.	MligTC455_02547	22	0.45	Mlig455_059096	Neo: - Age: -		1.706	-	-	-	0.745	-	0.961	Mlig455_059096 {REF} {Length: 612} {TRANSSPLICED} {RNA1509_37302} {RNA1310_32247} {RNA815_48776}
4.	MligTC455_14917	71	1.49	Mlig455_035669, Mlig455_035765	Neo: - Age: -	ADRA1A	1	-	-	-	1.000	-	-	Mlig455_035669 {REF} {Length: 1803} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=108.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=42.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.2]; Serpentine type 7TM GPCR chemoreceptor Srz [PF10325.11, score=21.2]; Olfactory receptor [PF13853.8, score=20.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=83.2, Expect=1e-16]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=79.7, Expect=1e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=85.1, Expect=1e-17]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=84.7, Expect=3e-17]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=84.0, Expect=4e-17]} {Dmel: FBgn0038874, ETHR, [Score=115, Expect=4e-28]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=76.6, Expect=5e-15]} {Smed: dd_Smed_v6_18312_0_1, dd_Smed_v6_18312_0_1, [Score=73.2, Expect=6e-14]} {RNA1310_81509} {RNA815_63181} Mlig455_035765 {REF} {Length: 1803} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=108.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=42.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.2]; Serpentine type 7TM GPCR chemoreceptor Srz [PF10325.11, score=21.2]; Olfactory receptor [PF13853.8, score=20.9]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=82.8, Expect=1e-16]; ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=80.1, Expect=1e-15]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=86.3, Expect=5e-18]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=84.3, Expect=4e-17]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=83.6, Expect=5e-17]} {Dmel: FBgn0038874, ETHR, [Score=115, Expect=5e-28]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=76.3, Expect=6e-15]} {Smed: dd_Smed_v6_18312_0_1, dd_Smed_v6_18312_0_1, [Score=72.0, Expect=1e-13]} {RNA1310_81509} {RNA815_63181}
5.	MligTC455_09876	49	1.03	Mlig455_009454	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_009454 {REF} {Length: 748} {NoTransDecoderORF} {RNA1509_42051} {RNA1310_88633.1} {RNA815_50612}
6.	MligTC455_38175	39	0.81	Mlig455_041332, Mlig455_056218	Neo: - Age: -	DNAH9	0.974	-	-	-	0.974	-	-	Mlig455_041332 {REF} {Length: 11655} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=560.7]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=503.4]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=327.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=68.8]; AAA domain [PF13401.8, score=24.4]; P-loop containing dynein motor region [PF12775.9, score=21.7]; AAA domain [PF13238.8, score=21.3]; AAA ATPase domain [PF13191.8, score=19.6]} {Human: ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=2544, Expect=0.0]; ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=2525, Expect=0.0]} {Mouse: ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=2547, Expect=0.0]; ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=2516, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=2306, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=573, Expect=8e-167]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=2819, Expect=0.0]} {RNA1509_7397} {RNA1310_128.1} {RNA815_30.1} Mlig455_056218 {REF} {Length: 12040} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=505.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=433.1]; P-loop containing dynein motor region [PF12775.9, score=256.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=97.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=87.1]; AAA domain [PF13401.8, score=29.7]; AAA ATPase domain [PF13191.8, score=29.6]; AAA domain [PF13604.8, score=25.4]; AAA domain [PF13245.8, score=25.3]; Sigma-54 interaction domain [PF00158.28, score=22.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.7]; AAA domain [PF13238.8, score=20.7]; Sigma-54 interaction domain [PF14532.8, score=19.9]} {Human: ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=2583, Expect=0.0]; ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=2573, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=2600, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=2590, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=2405, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=632, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=2818, Expect=0.0]} {RNA1509_140, RNA1509_15019} {RNA1310_737, RNA1509_15019} {RNA1509_15019, RNA815_30.1}
7.	MligTC455_21573	21	0.44	Mlig455_017688, Mlig455_017738	Neo: - Age: Up-Down-Down	DICER1	0.973	-	-	-	0.973	-	-	Mlig455_017688 {REF} {Length: 5768} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=321.1]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [Score=177, Expect=3e-44]} {RNA1509_6090} {RNA1310_444} {RNA815_30079} Mlig455_017738 {REF} {Length: 11721} {TRANSSPLICED} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=399.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.4]; Helicase conserved C-terminal domain [PF00271.33, score=63.2]; DEAD/DEAH box helicase [PF00270.31, score=46.5]; Integrase core domain [PF00665.28, score=45.0]; Integrase zinc binding domain [PF17921.3, score=41.9]; Type III restriction enzyme, res subunit [PF04851.17, score=40.8]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=99.8, Expect=1e-19]; ENSG00000108771, DHX58, DExH-box helicase 58, [Score=95.5, Expect=9e-19]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=99.8, Expect=7e-20]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=95.5, Expect=1e-18]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=3e-54]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=121, Expect=5e-29]} {RNA1509_6090} {RNA1310_444} {RNA815_10889}
8.	MligTC455_12201	679	14.14	Mlig455_006927, Mlig455_017941	Neo: - Age: - Region-enriched R6: 3.425/0.00030	NR1D2, RORA	0.97	-	-	0.970	-	-	-	Mlig455_006927 {REF} {Length: 3874} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=149.5]} {Human: ENSG00000069667, RORA, RAR related orphan receptor A, [Score=101, Expect=7e-22]; ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=101, Expect=9e-22]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=99.4, Expect=3e-21]; ENSG00000198963, RORB, RAR related orphan receptor B, [Score=99.0, Expect=3e-21]; ENSG00000143365, RORC, RAR related orphan receptor C, [Score=97.4, Expect=1e-20]} {Mouse: ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=100, Expect=8e-22]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=99.4, Expect=2e-21]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=99.0, Expect=2e-21]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=98.2, Expect=8e-21]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0001323, knrl, knirps-like, [RH, Score=98.2, Expect=7e-21]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=103, Expect=5e-23]} {Smed: dd_Smed_v6_42763_0_1, dd_Smed_v6_42763_0_1, [RH, Score=272, Expect=3e-79]} {RNA1509_21739} {RNA1310_10052} {RNA815_22856} Mlig455_017941 {REF} {Length: 3200} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=149.4]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=101, Expect=9e-22]; ENSG00000069667, RORA, RAR related orphan receptor A, [Score=101, Expect=6e-22]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=99.4, Expect=3e-21]; ENSG00000198963, RORB, RAR related orphan receptor B, [Score=99.0, Expect=3e-21]; ENSG00000143365, RORC, RAR related orphan receptor C, [Score=97.4, Expect=1e-20]} {Mouse: ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=100, Expect=7e-22]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=99.0, Expect=2e-21]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=99.0, Expect=2e-21]; ENSMUSG00000021775, Nr1d2, nuclear receptor subfamily 1, group D, member 2, [Score=98.2, Expect=7e-21]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0001323, knrl, knirps-like, [RH, Score=98.2, Expect=6e-21]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=103, Expect=5e-23]} {Smed: dd_Smed_v6_42763_0_1, dd_Smed_v6_42763_0_1, [RH, Score=271, Expect=3e-79]} {RNA1509_21739} {RNA1310_10052, RNA1509_21739} {RNA1509_21739, RNA815_22856}
9.	MligTC455_19803	48	1	Mlig455_020073, Mlig455_040876, Mlig455_066459, Mlig455_066460	Neo: - Age: -	KREMEN1, KREMEN2	0.969	-	-	-	0.969	-	-	Mlig455_020073 {REF} {Length: 1139} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_040876 {REF} {Length: 898} {Pfam: WSC domain [PF01822.21, score=61.5]; PAN domain [PF00024.28, score=19.4]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=48.1, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=63.9, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=9e-06]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_066459 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853} Mlig455_066460 {REF} {Length: 2320} {Pfam: WSC domain [PF01822.21, score=57.3]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}
10.	MligTC455_13583	31	0.64	Mlig455_052529, Mlig455_069099	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_052529 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802} Mlig455_069099 {REF} {Length: 381} {NoTransDecoderORF} {RNA1310_49408} {RNA815_48802}
11.	MligTC455_08183	4	0.08	Mlig455_066960	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_066960 {REF} {Length: 789} {RNA1310_59548}
12.	MligTC455_32356	6	0.12	Mlig455_009582	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_009582 {REF} {Length: 238} {NoTransDecoderORF}
13.	MligTC455_09802	39	0.81	Mlig455_045247	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_045247 {REF} {Length: 309} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=25.4} {RNA1509_45595} {RNA1310_67684} {RNA815_31014}
14.	MligTC455_10617	423	8.82	Mlig455_023363, Mlig455_068941	Neo: Irradiation Age: - Region-specific R4: 6.593 Region-enriched R4: 3.320/0.01596		0.952	-	-	-	0.952	-	-	Mlig455_023363 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209} Mlig455_068941 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}
15.	MligTC455_41375	44	0.92	Mlig455_000822	Neo: - Age: Up-Down-Up Region-enriched R2: 3.834/0.04522 Region-enriched R7: 3.684/0.02449	EGR1	0.952	-	-	-	-	-	0.952	Mlig455_000822 {REF} {Length: 4199} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.7]; Zinc-finger double domain [PF13465.8, score=52.2]; C2H2-type zinc finger [PF13894.8, score=38.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.3]; C2H2-type zinc finger [PF13912.8, score=22.1]} {Human: ENSG00000120738, EGR1, early growth response 1, [Score=158, Expect=5e-43]; ENSG00000179388, EGR3, early growth response 3, [Score=154, Expect=2e-42]; ENSG00000122877, EGR2, early growth response 2, [Score=151, Expect=7e-41]} {Mouse: ENSMUSG00000038418, Egr1, early growth response 1, [Score=158, Expect=4e-43]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=154, Expect=1e-42]; ENSMUSG00000116458, Egr2, early growth response 2, [Score=152, Expect=3e-41]; ENSMUSG00000037868, Egr2, early growth response 2, [Score=152, Expect=3e-41]} {Dmel: FBgn0003499, sr, stripe, [Score=158, Expect=3e-42]} {Celegans: WBGene00007772, egrh-1, EGR (Early Growth factor Response factor) Homolog, [Score=144, Expect=8e-39]} {Smed: dd_Smed_v6_7091_0_1, dd_Smed_v6_7091_0_1, [Score=132, Expect=1e-34]} {RNA1310_52919} {RNA815_42057}
16.	MligTC455_12027	121	2.52	Mlig455_050667	Neo: - Age: Up-Down-Up Region-enriched R6: 5.711/0.00000		0.951	-	-	0.951	-	-	-	Mlig455_050667 {REF} {Length: 1275} {NoTransDecoderORF} {RNA1310_48786} {RNA815_51379}
17.	MligTC455_14819	34	0.71	Mlig455_042373	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_042373 {REF} {Length: 305} {NoTransDecoderORF} {RNA1310_4527.2}
18.	MligTC455_51371	160	3.32	Mlig455_069846	Neo: Irradiation Age: Up-Down-Down Region-specific R4: 4.439 Region-enriched R4: 2.891/0.00772		0.951	-	-	-	0.951	-	-	Mlig455_069846 {REF} {Length: 1303} {TRANSSPLICED} {RNA1509_42310, RNA1509_42682, RNA1509_47024} {RNA1310_23849.1, RNA1509_42310, RNA1509_42682, RNA1509_47024} {RNA1509_42310, RNA1509_42682, RNA1509_47024, RNA815_11201.1}

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