Data search
Results for MligTC455_32362
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32362 | 640 | 13.34 | Mlig455_009286 | Neo: - Age: - Regeneration-upregulated TP: 2.500 Regeneration-enriched TP: 2.500 |
Mlig455_009286 {REF} {Length: 1450} {RNA1509_48728} {RNA1310_27345} {RNA815_10107.1} |
Cumulative graph for MligTC455_32362
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.868 | 3.864 | 0.07947 | 0.61697 | |
| RegionR2 | 0.694 | 3.864 | 0.28049 | 0.66704 | |
| RegionR3 | 1.229 | 3.864 | 0.01595 | 0.20476 | |
| RegionR4 | 0.674 | 3.864 | 0.24575 | 0.54401 | |
| RegionR5 | -0.419 | 3.864 | 0.46565 | 0.82772 | |
| RegionR6 | 0.618 | 3.864 | 0.26345 | 0.85147 | |
| RegionR7 | -0.196 | 3.864 | 0.79661 | 1.00000 | |
| RegionR8 | 0.268 | 3.864 | 0.73737 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.749 | 3.864 | 0.02698 | 0.60924 | |
| RegenerationR2 | 0.628 | 3.864 | 0.25246 | 0.69855 | |
| RegenerationR3 | 0.118 | 3.864 | 0.83287 | 0.99165 | |
| RegenerationR4 | 0.111 | 3.864 | 0.85103 | 1.00000 | |
| RegenerationR5 | 1.152 | 3.864 | 0.04495 | 0.34698 | |
| RegenerationR6 | 0.529 | 3.864 | 0.37007 | 0.71312 | |
| RegenerationBL | 1.031 | 3.864 | 0.08735 | 0.34659 | |
| RegenerationTP | 2.5 | 3.864 | 0.00003 | 0.00585 | Specific for TP: 2.500 |
Genes with expression patterns similar to MligTC455_32362
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32362 | 640 | 13.34 | Mlig455_009286 | Neo: - Age: - Regeneration-upregulated TP: 2.500 Regeneration-enriched TP: 2.500 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009286 {REF} {Length: 1450} {RNA1509_48728} {RNA1310_27345} {RNA815_10107.1} | |
| 2. | MligTC455_32363 | 604 | 12.59 | Mlig455_037021 | Neo: - Age: - |
5.529 | 0.905 | 0.889 | 0.842 | 0.976 | 0.980 | 0.937 | Mlig455_037021 {REF} {Length: 5141} {RNA1509_48728, RNA1509_55155} {RNA1310_27345, RNA1509_55155} {RNA1509_55155, RNA815_6529.1} | |
| 3. | MligTC455_42980 | 577 | 12.02 | Mlig455_001415 | Neo: Int S/G2/M Age: - |
1.835 | - | - | - | - | 0.885 | 0.950 | Mlig455_001415 {REF} {Length: 2216} {TRANSSPLICED} {Pfam: RF-1 domain [PF00472.22, score=19.6]} {Celegans: WBGene00019838, R02F2.9, [Score=66.6, Expect=4e-14]} {RNA1509_19536} {RNA1310_42964, RNA1509_19536} {RNA1509_19536, RNA815_18239} | |
| 4. | MligTC455_51486 | 217 | 4.53 | Mlig455_022112 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.715 Region-enriched R8: 3.184/0.01547 |
1.702 | - | - | - | 0.955 | - | 0.747 | Mlig455_022112 {REF} {Length: 1592} {RNA1310_21476.1} {RNA815_10714} | |
| 5. | MligTC455_28758 | 32113 | 669.02 | Mlig455_053395 | Neo: - Age: - Region-enriched R8: 1.331/0.02340 Regeneration-downregulated BL: -1.855 Regeneration-depleted BL: -1.855 |
UBE2O | 0.988 | - | - | - | - | 0.988 | - | Mlig455_053395 {REF} {Length: 14273} {TRANSSPLICED} {Human: ENSG00000175931, UBE2O, ubiquitin conjugating enzyme E2 O, [Score=91.7, Expect=4e-18]} {Mouse: ENSMUSG00000020802, Ube2o, ubiquitin-conjugating enzyme E2O, [Score=92.8, Expect=1e-18]} {Dmel: FBgn0027512, CG10254, [Score=72.4, Expect=2e-12]} {Smed: dd_Smed_v6_9319_0_1, dd_Smed_v6_9319_0_1, [Score=105, Expect=7e-23]} {RNA1509_28643, RNA1509_5756} {RNA1310_576.1, RNA1509_5756} {RNA1509_5756, RNA815_1671.1} |
| 6. | MligTC455_28755 | 31590 | 658.11 | Mlig455_000327 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.469 Region-enriched R8: 1.346/0.02236 Regeneration-downregulated BL: -1.871 Regeneration-depleted BL: -1.871 |
TRIM27 | 0.986 | - | - | - | - | 0.986 | - | Mlig455_000327 {REF} {Length: 864} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=32.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.9]; RING-type zinc-finger [PF13445.8, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.5]; Ring finger domain [PF13639.8, score=22.7]; zinc-RING finger domain [PF14634.8, score=22.2]} {Human: ENSG00000215641, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000237071, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000204713, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000229006, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000234495, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000237462, TRIM27, tripartite motif containing 27, [RH, Score=50.4, Expect=1e-07]; ENSG00000233948, TRIM27, tripartite motif containing 27, [RH, Score=50.4, Expect=1e-07]} {Mouse: ENSMUSG00000021326, Trim27, tripartite motif-containing 27, [RH, Score=51.2, Expect=7e-08]} {RNA1509_13494} {RNA1310_30598} {RNA815_18679} |
| 7. | MligTC455_28757 | 33753 | 703.18 | Mlig455_047399 | Neo: - Age: logFC(26M/2M)=2.751 Region-enriched R8: 1.310/0.02689 Regeneration-downregulated BL: -1.858 Regeneration-depleted BL: -1.858 |
0.983 | - | - | - | - | 0.983 | - | Mlig455_047399 {REF} {Length: 383} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1068} {RNA1310_55229} {RNA815_18679} | |
| 8. | MligTC455_28756 | 33722 | 702.55 | Mlig455_041173 | Neo: - Age: Up-Down-Up Region-enriched R8: 1.344/0.02990 |
0.979 | - | - | - | - | 0.979 | - | Mlig455_041173 {REF} {Length: 15531} {Pfam: Integrase core domain [PF00665.28, score=41.2]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=5e-13]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1} | |
| 9. | MligTC455_24261 | 90 | 1.87 | Mlig455_022408 | Neo: - Age: logFC(26M/2M)=-0.488 |
0.968 | - | - | - | - | 0.968 | - | Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683} | |
| 10. | MligTC455_31746 | 252 | 5.24 | Mlig455_020444 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.326/0.00065 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_020444 {REF} {Length: 917} {RNA1310_39333.1} {RNA815_12620.1} | |
| 11. | MligTC455_18900 | 156 | 3.26 | Mlig455_039299, Mlig455_054447 | Neo: - Age: Up-Down-Down Region-enriched R2: 4.913/0.00230 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_039299 {REF} {Length: 1712} {RNA1310_23535} {RNA815_25250} Mlig455_054447 {REF} {Length: 1707} {Smed: dd_Smed_v6_13268_0_1, dd_Smed_v6_13268_0_1, [RH, Score=43.9, Expect=1e-06]} {RNA1310_23535} {RNA815_25250} |
|
| 12. | MligTC455_32787 | 379 | 7.9 | Mlig455_043579 | Neo: - Age: logFC(26M/2M)=0.262 |
RCL1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_043579 {REF} {Length: 1917} {TRANSSPLICED} {Pfam: RNA 3'-terminal phosphate cyclase [PF01137.23, score=178.0]; RNA 3'-terminal phosphate cyclase (RTC), insert domain [PF05189.15, score=91.2]} {Human: ENSG00000120158, RCL1, RNA terminal phosphate cyclase like 1, [RH, Score=361, Expect=5e-123]} {Mouse: ENSMUSG00000024785, Rcl1, RNA terminal phosphate cyclase-like 1, [RH, Score=360, Expect=9e-123]} {Dmel: FBgn0020909, Rtc1, [RH, Score=310, Expect=3e-103]} {Celegans: WBGene00022852, ZK1127.5, Probable RNA 3'-terminal phosphate cyclase-like protein, [RH, Score=301, Expect=5e-100]} {Smed: dd_Smed_v6_3243_0_1, dd_Smed_v6_3243_0_1, [RH, Score=210, Expect=9e-65]} {RNA1509_29597, RNA1509_31343} {RNA1310_15123.2, RNA1509_29597, RNA1509_31343} {RNA1509_29597, RNA1509_31343, RNA815_10939} |
| 13. | MligTC455_36536 | 886 | 18.45 | Mlig455_032739 | Neo: - Age: Down-Up-Down |
SYS1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_032739 {REF} {Length: 1671} {TRANSSPLICED} {Pfam: Integral membrane protein S linking to the trans Golgi network [PF09801.11, score=154.9]} {Human: ENSG00000204070, SYS1, SYS1, golgi trafficking protein, [RH, Score=142, Expect=9e-44]} {Mouse: ENSMUSG00000045503, Sys1, SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae), [RH, Score=143, Expect=3e-44]} {Dmel: FBgn0037603, CG11753, [RH, Score=121, Expect=2e-35]} {Celegans: WBGene00020193, T03F1.12, [RH, Score=100, Expect=8e-28]} {RNA1509_23153} {RNA1310_26666, RNA1509_23153} {RNA1509_23153, RNA815_15598} |
| 14. | MligTC455_28142 | 254 | 5.3 | Mlig455_011323, Mlig455_026058 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_011323 {REF} {Length: 2835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1} Mlig455_026058 {REF} {Length: 2664} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1} |
|
| 15. | MligTC455_28759 | 22924 | 477.58 | Mlig455_015450 | Neo: - Age: Up-Down-Up Region-enriched R8: 1.325/0.01787 Regeneration-downregulated BL: -2.091 Regeneration-depleted BL: -2.091 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_015450 {REF} {Length: 337} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_18729} {RNA1310_68532} {RNA815_18679} | |
| 16. | MligTC455_11369 | 352 | 7.34 | Mlig455_020293 | Neo: - Age: logFC(26M/2M)=-0.516 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_020293 {REF} {Length: 1579} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=40.7]} {RNA1509_26893} {RNA1310_2708} {RNA815_9370.1} | |
| 17. | MligTC455_40766 | 99 | 2.05 | Mlig455_012729 | Neo: - Age: Down-Down-Up |
TP53I11 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_012729 {REF} {Length: 2823} {Pfam: Tumour protein p53-inducible protein 11 [PF14936.8, score=89.2]} {Human: ENSG00000175274, TP53I11, tumor protein p53 inducible protein 11, [Score=65.5, Expect=4e-13]} {Mouse: ENSMUSG00000068735, Trp53i11, transformation related protein 53 inducible protein 11, [Score=66.6, Expect=2e-13]} {Celegans: WBGene00021185, Y9C12A.1, [Score=67.0, Expect=2e-13]} {RNA1310_38478} {RNA815_33223} |
| 18. | MligTC455_29016 | 36522 | 760.88 | Mlig455_005202 | Neo: - Age: - Regeneration-enriched R1: 3.026 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
| 19. | MligTC455_18147 | 739 | 15.4 | Mlig455_048333 | Neo: - Age: logFC(26M/2M)=-0.518 |
U2AF1L5 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_048333 {REF} {Length: 2682} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=51.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=28.7]; Torus domain [PF16131.7, score=25.9]; Zinc finger domain [PF18345.3, score=24.1]} {Human: ENSG00000275895, U2AF1L5, U2 small nuclear RNA auxiliary factor 1 like 5, [RH, Score=337, Expect=3e-118]; ENSG00000160201, U2AF1, U2 small nuclear RNA auxiliary factor 1, [RH, Score=337, Expect=3e-118]} {Mouse: ENSMUSG00000061613, U2af1, U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, [RH, Score=337, Expect=2e-118]; ENSMUSG00000078765, U2af1l4, U2 small nuclear RNA auxiliary factor 1-like 4, [RH, Score=332, Expect=1e-116]; ENSMUSG00000109378, Gm49396, predicted gene, 49396, [RH, Score=332, Expect=1e-116]} {Dmel: FBgn0017457, U2af38, U2 small nuclear riboprotein auxiliary factor 38, [RH, Score=329, Expect=6e-115]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [RH, Score=265, Expect=3e-89]} {Smed: dd_Smed_v6_4061_0_2, dd_Smed_v6_4061_0_2, [RH, Score=361, Expect=3e-128]} {RNA1509_16935, RNA1509_57826} {RNA1310_24807, RNA1509_57826} {RNA1509_57826, RNA815_15940.1} |
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