TomoSeq data search

Data search

Results for MligTC455_32486

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32486

7832

163.17

Mlig455_043021

Neo: Int S/G2/M

Age: -

RPS13

Mlig455_043021 {REF} {Length: 696} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_31065} {RNA1310_52126, RNA1509_31065} {RNA1509_31065, RNA815_26208.1}

Cumulative graph for MligTC455_32486

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.521	7.453	0.15859	0.77782
RegionR2	-0.802	7.453	0.00011	0.00419
RegionR3	0.154	7.453	0.35554	0.89087
RegionR4	0.807	7.453	0.00002	0.00048
RegionR5	0.563	7.453	0.00034	0.00440
RegionR6	0.218	7.453	0.19294	0.76058
RegionR7	0.061	7.453	0.74602	1.00000
RegionR8	-0.48	7.453	0.04247	0.40366

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.093	7.453	0.85111	1.00000
RegenerationR2	-0.087	7.453	0.66777	0.94436
RegenerationR3	-0.297	7.453	0.15214	0.58161
RegenerationR4	-0.457	7.453	0.02893	0.27381
RegenerationR5	-0.185	7.453	0.35601	0.76826
RegenerationR6	-0.199	7.453	0.34125	0.68715
RegenerationBL	0.256	7.453	0.20169	0.54074
RegenerationTP	0.021	7.453	0.92613	1.00000

Genes with expression patterns similar to MligTC455_32486

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32486	7832	163.17	Mlig455_043021	Neo: Int S/G2/M Age: -	RPS13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043021 {REF} {Length: 696} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_31065} {RNA1310_52126, RNA1509_31065} {RNA1509_31065, RNA815_26208.1}
2.	MligTC455_26700	1248	26.01	Mlig455_009622	Neo: Int S/G2/M Age: logFC(26M/2M)=0.481 Region-enriched R5: 1.730/0.00009 Regeneration-upregulated TP: 2.304 Regeneration-enriched TP: 2.304	RPN2	0.962	-	-	-	0.962	-	-	Mlig455_009622 {REF} {Length: 4305} {TRANSSPLICED} {Pfam: Oligosaccharyltransferase subunit Ribophorin II [PF05817.16, score=573.4]} {Human: ENSG00000118705, RPN2, ribophorin II, [RH, Score=308, Expect=2e-95]} {Mouse: ENSMUSG00000027642, Rpn2, ribophorin II, [RH, Score=304, Expect=4e-94]} {Dmel: FBgn0034277, OstDelta, Oligosaccharide transferase Delta subunit, [RH, Score=296, Expect=2e-91]} {Celegans: WBGene00019693, ostd-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, [RH, Score=178, Expect=4e-51]} {Smed: dd_Smed_v6_538_0_1, dd_Smed_v6_538_0_1, [RH, Score=318, Expect=9e-100]} {RNA1509_27563, RNA1509_37461, RNA1509_8958} {RNA1310_8527.1, RNA1509_27563, RNA1509_37461, RNA1509_8958} {RNA1509_27563, RNA1509_37461, RNA1509_8958, RNA815_2829}
3.	MligTC455_29302	2799	58.31	Mlig455_069986	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.773 Region-enriched R6: 1.296/0.00011 Region-enriched R8: 1.060/0.04043	MYH2	0.959	-	-	-	0.959	-	-	Mlig455_069986 {REF} {Length: 7490} {Pfam: Myosin tail [PF01576.21, score=487.0]; Protein of unknown function (DUF1664) [PF07889.14, score=47.5]; Crescentin protein [PF19220.2, score=24.1]; Autophagy protein 16 (ATG16) [PF08614.13, score=22.0]; Intermediate filament protein [PF00038.23, score=20.2]} {Human: ENSG00000125414, MYH2, myosin heavy chain 2, [Score=802, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=799, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [Score=798, Expect=0.0]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=796, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [Score=793, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [Score=793, Expect=0.0]} {Mouse: ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [Score=803, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=790, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [Score=787, Expect=0.0]; ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [Score=786, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=873, Expect=0.0]} {Celegans: WBGene00006789, unc-54, Myosin-4, [Score=793, Expect=0.0]} {Smed: dd_Smed_v6_579_0_2, dd_Smed_v6_579_0_2, [Score=1014, Expect=0.0]} {RNA1509_1454} {RNA1310_412.1} {RNA815_129.1}
4.	MligTC455_29301	2735	56.98	Mlig455_063822	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.465 Region-enriched R6: 1.256/0.00010 Region-enriched R8: 1.155/0.01232	MYH6	0.958	-	-	-	0.958	-	-	Mlig455_063822 {REF} {Length: 7719} {Pfam: Myosin head (motor domain) [PF00063.23, score=936.9]; Myosin tail [PF01576.21, score=585.4]; Myosin N-terminal SH3-like domain [PF02736.21, score=57.4]; Protein of unknown function (DUF1664) [PF07889.14, score=37.7]; Crescentin protein [PF19220.2, score=25.9]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2081, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2075, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2039, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2038, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2032, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2018, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=2003, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2081, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2069, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2063, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2039, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2038, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2034, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=2010, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=1981, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2087, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1993, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2721, Expect=0.0]} {RNA1509_1454, RNA1509_7295} {RNA1310_412.1, RNA1509_1454, RNA1509_7295} {RNA1509_1454, RNA1509_7295, RNA815_129.1}
5.	MligTC455_28821	671	13.98	Mlig455_041623	Neo: - Age: -	CD151	0.954	-	-	-	0.954	-	-	Mlig455_041623 {REF} {Length: 4294} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=125.9]} {Human: ENSG00000177697, CD151, CD151 molecule (Raph blood group), [RH, Score=120, Expect=2e-32]; ENSG00000110900, TSPAN11, tetraspanin 11, [RH, Score=118, Expect=1e-31]} {Mouse: ENSMUSG00000030351, Tspan11, tetraspanin 11, [RH, Score=122, Expect=3e-33]} {Dmel: FBgn0033629, Tsp47F, Tetraspanin 47F, [Score=87.8, Expect=2e-20]} {Celegans: WBGene00023491, tsp-21, Tetraspanin, [Score=76.3, Expect=5e-16]} {Smed: dd_Smed_v6_5209_0_1, dd_Smed_v6_5209_0_1, [RH, Score=119, Expect=4e-32]} {RNA1509_20283} {RNA1310_26962.1, RNA1509_20283} {RNA1509_20283, RNA815_17559}

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