Data search
Results for MligTC455_29302
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29302 | 2799 | 58.31 | Mlig455_069986 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.773 Region-enriched R6: 1.296/0.00011 |
MYH2 | Mlig455_069986 {REF} {Length: 7490} {Pfam: Myosin tail [PF01576.21, score=487.0]; Protein of unknown function (DUF1664) [PF07889.14, score=47.5]; Crescentin protein [PF19220.2, score=24.1]; Autophagy protein 16 (ATG16) [PF08614.13, score=22.0]; Intermediate filament protein [PF00038.23, score=20.2]} {Human: ENSG00000125414, MYH2, myosin heavy chain 2, [Score=802, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=799, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [Score=798, Expect=0.0]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=796, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [Score=793, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [Score=793, Expect=0.0]} {Mouse: ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [Score=803, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=790, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [Score=787, Expect=0.0]; ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [Score=786, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=873, Expect=0.0]} {Celegans: WBGene00006789, unc-54, Myosin-4, [Score=793, Expect=0.0]} {Smed: dd_Smed_v6_579_0_2, dd_Smed_v6_579_0_2, [Score=1014, Expect=0.0]} {RNA1509_1454} {RNA1310_412.1} {RNA815_129.1} |
Cumulative graph for MligTC455_29302
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.638 | 6.013 | 0.02423 | 0.41566 | |
| RegionR2 | -1.117 | 6.013 | 0.00133 | 0.02665 | |
| RegionR3 | -0.158 | 6.013 | 0.57817 | 1.00000 | |
| RegionR4 | 0.502 | 6.013 | 0.13117 | 0.36699 | |
| RegionR5 | -0.406 | 6.013 | 0.15408 | 0.41039 | |
| RegionR6 | 1.296 | 6.013 | 0.00000 | 0.00011 | |
| RegionR7 | 0.461 | 6.013 | 0.12773 | 0.67327 | |
| RegionR8 | 1.06 | 6.013 | 0.00082 | 0.04043 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.347 | 6.013 | 0.76687 | 1.00000 | |
| RegenerationR2 | -0.683 | 6.013 | 0.04470 | 0.34976 | |
| RegenerationR3 | -0.288 | 6.013 | 0.39838 | 0.80178 | |
| RegenerationR4 | -0.388 | 6.013 | 0.27020 | 0.71640 | |
| RegenerationR5 | 0.328 | 6.013 | 0.33044 | 0.75180 | |
| RegenerationR6 | -1.053 | 6.013 | 0.00129 | 0.03983 | |
| RegenerationBL | -0.254 | 6.013 | 0.40428 | 0.77334 | |
| RegenerationTP | -0.931 | 6.013 | 0.00845 | 0.15536 |
Genes with expression patterns similar to MligTC455_29302
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29302 | 2799 | 58.31 | Mlig455_069986 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.773 Region-enriched R6: 1.296/0.00011 |
MYH2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069986 {REF} {Length: 7490} {Pfam: Myosin tail [PF01576.21, score=487.0]; Protein of unknown function (DUF1664) [PF07889.14, score=47.5]; Crescentin protein [PF19220.2, score=24.1]; Autophagy protein 16 (ATG16) [PF08614.13, score=22.0]; Intermediate filament protein [PF00038.23, score=20.2]} {Human: ENSG00000125414, MYH2, myosin heavy chain 2, [Score=802, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [Score=799, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [Score=798, Expect=0.0]; ENSG00000197616, MYH6, myosin heavy chain 6, [Score=796, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [Score=793, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [Score=793, Expect=0.0]} {Mouse: ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [Score=803, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [Score=793, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [Score=790, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [Score=787, Expect=0.0]; ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [Score=786, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [Score=873, Expect=0.0]} {Celegans: WBGene00006789, unc-54, Myosin-4, [Score=793, Expect=0.0]} {Smed: dd_Smed_v6_579_0_2, dd_Smed_v6_579_0_2, [Score=1014, Expect=0.0]} {RNA1509_1454} {RNA1310_412.1} {RNA815_129.1} |
| 2. | MligTC455_29301 | 2735 | 56.98 | Mlig455_063822 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.465 Region-enriched R6: 1.256/0.00010 |
MYH6 | 5.986 | 0.999 | 0.998 | 0.997 | 0.996 | 0.999 | 0.997 | Mlig455_063822 {REF} {Length: 7719} {Pfam: Myosin head (motor domain) [PF00063.23, score=936.9]; Myosin tail [PF01576.21, score=585.4]; Myosin N-terminal SH3-like domain [PF02736.21, score=57.4]; Protein of unknown function (DUF1664) [PF07889.14, score=37.7]; Crescentin protein [PF19220.2, score=25.9]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2081, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2075, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2039, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2038, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2032, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2018, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=2003, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2081, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2069, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2063, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2039, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2038, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2034, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=2010, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=1981, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2087, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1993, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2721, Expect=0.0]} {RNA1509_1454, RNA1509_7295} {RNA1310_412.1, RNA1509_1454, RNA1509_7295} {RNA1509_1454, RNA1509_7295, RNA815_129.1} |
| 3. | MligTC455_21301 | 2418 | 50.37 | Mlig455_055218, Mlig455_055312 | Neo: - Age: - Regeneration-enriched BL: 2.253 |
HNRNPR, SYNCRIP | 1.712 | - | - | - | 0.952 | 0.760 | - | Mlig455_055218 {REF} {Length: 3254} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=142.8]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.6]; RNA recognition motif [PF16367.7, score=22.7]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [RH, Score=373, Expect=7e-120]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [RH, Score=372, Expect=1e-119]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=358, Expect=4e-113]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=404, Expect=4e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=3e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=258, Expect=1e-75]} {RNA1509_41895, RNA1509_4811} {RNA1310_12864, RNA1509_4811} {RNA1509_4811, RNA815_4749.1} Mlig455_055312 {REF} {Length: 3347} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=144.4]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.5]; RNA recognition motif [PF16367.7, score=21.9]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]} {Mouse: ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=356, Expect=2e-112]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=405, Expect=2e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=2e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=256, Expect=8e-75]} {RNA1509_41895} {RNA1310_12864} {RNA815_4749.1} |
| 4. | MligTC455_32486 | 7832 | 163.17 | Mlig455_043021 | Neo: Int S/G2/M Age: - |
RPS13 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_043021 {REF} {Length: 696} {TRANSSPLICED} {Pfam: Ribosomal S13/S15 N-terminal domain [PF08069.14, score=105.3]; Ribosomal protein S15 [PF00312.24, score=49.9]} {Human: ENSG00000110700, RPS13, ribosomal protein S13, [RH, Score=265, Expect=3e-92]} {Mouse: ENSMUSG00000090862, Rps13, ribosomal protein S13, [RH, Score=265, Expect=2e-92]} {Dmel: FBgn0010265, RpS13, Ribosomal protein S13, [RH, Score=254, Expect=4e-88]} {Celegans: WBGene00004482, rps-13, 40S ribosomal protein S13, [RH, Score=239, Expect=2e-82]} {Smed: dd_Smed_v6_360_0_1, dd_Smed_v6_360_0_1, [RH, Score=214, Expect=2e-72]} {RNA1509_31065} {RNA1310_52126, RNA1509_31065} {RNA1509_31065, RNA815_26208.1} |
| 5. | MligTC455_17356 | 173 | 3.6 | Mlig455_042462 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_042462 {REF} {Length: 1477} {RNA1509_47909} {RNA1310_36847.1} {RNA815_24117} | |
| 6. | MligTC455_26700 | 1248 | 26.01 | Mlig455_009622 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.481 Region-enriched R5: 1.730/0.00009 Regeneration-upregulated TP: 2.304 Regeneration-enriched TP: 2.304 |
RPN2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_009622 {REF} {Length: 4305} {TRANSSPLICED} {Pfam: Oligosaccharyltransferase subunit Ribophorin II [PF05817.16, score=573.4]} {Human: ENSG00000118705, RPN2, ribophorin II, [RH, Score=308, Expect=2e-95]} {Mouse: ENSMUSG00000027642, Rpn2, ribophorin II, [RH, Score=304, Expect=4e-94]} {Dmel: FBgn0034277, OstDelta, Oligosaccharide transferase Delta subunit, [RH, Score=296, Expect=2e-91]} {Celegans: WBGene00019693, ostd-1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, [RH, Score=178, Expect=4e-51]} {Smed: dd_Smed_v6_538_0_1, dd_Smed_v6_538_0_1, [RH, Score=318, Expect=9e-100]} {RNA1509_27563, RNA1509_37461, RNA1509_8958} {RNA1310_8527.1, RNA1509_27563, RNA1509_37461, RNA1509_8958} {RNA1509_27563, RNA1509_37461, RNA1509_8958, RNA815_2829} |
| 7. | MligTC455_30483 | 50 | 1.04 | Mlig455_036778 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_036778 {REF} {Length: 303} {NoTransDecoderORF} {RNA1310_71532} {RNA815_40310} |
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