TomoSeq data search

Data search

Results for MligTC455_32510

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32510

687

14.31

Mlig455_060986

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 3.181

Regeneration-enriched BL: 3.181

RPS28

Mlig455_060986 {REF} {Length: 390} {TRANSSPLICED} {Pfam: Ribosomal protein S28e [PF01200.20, score=110.6]} {Human: ENSG00000233927, RPS28, ribosomal protein S28, [RH, Score=114, Expect=4e-35]} {Mouse: ENSMUSG00000067288, Rps28, ribosomal protein S28, [RH, Score=114, Expect=2e-35]} {Dmel: FBgn0030136, RpS28b, Ribosomal protein S28b, [RH, Score=101, Expect=2e-30]} {Celegans: WBGene00004497, rps-28, 40S ribosomal protein S28, [RH, Score=107, Expect=9e-33]} {Smed: dd_Smed_v6_65_0_1, dd_Smed_v6_65_0_1, [RH, Score=104, Expect=1e-31]} {RNA1509_9829} {RNA1310_79679.1} {RNA815_44996}

Cumulative graph for MligTC455_32510

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.767	4.143	0.63213	1.00000
RegionR2	0.508	4.143	0.48835	0.87066
RegionR3	0.029	4.143	0.95386	1.00000
RegionR4	-0.306	4.143	0.66467	0.96307
RegionR5	1.135	4.143	0.01895	0.09326
RegionR6	0.307	4.143	0.58227	1.00000
RegionR7	0.628	4.143	0.36300	0.99838
RegionR8	-1.534	4.143	0.18697	0.77571

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.227	4.143	0.01263	0.48006
RegenerationR2	1.099	4.143	0.06679	0.42211
RegenerationR3	2.552	4.143	0.00017	0.01633
RegenerationR4	2.461	4.143	0.00019	0.01108
RegenerationR5	1.671	4.143	0.00378	0.10991
RegenerationR6	2.173	4.143	0.00082	0.03098
RegenerationBL	3.181	4.143	0.00000	0.00027	Specific for BL: 3.181
RegenerationTP	2.847	4.143	0.00045	0.02937

Genes with expression patterns similar to MligTC455_32510

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32510	687	14.31	Mlig455_060986	Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 3.181 Regeneration-enriched BL: 3.181	RPS28	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060986 {REF} {Length: 390} {TRANSSPLICED} {Pfam: Ribosomal protein S28e [PF01200.20, score=110.6]} {Human: ENSG00000233927, RPS28, ribosomal protein S28, [RH, Score=114, Expect=4e-35]} {Mouse: ENSMUSG00000067288, Rps28, ribosomal protein S28, [RH, Score=114, Expect=2e-35]} {Dmel: FBgn0030136, RpS28b, Ribosomal protein S28b, [RH, Score=101, Expect=2e-30]} {Celegans: WBGene00004497, rps-28, 40S ribosomal protein S28, [RH, Score=107, Expect=9e-33]} {Smed: dd_Smed_v6_65_0_1, dd_Smed_v6_65_0_1, [RH, Score=104, Expect=1e-31]} {RNA1509_9829} {RNA1310_79679.1} {RNA815_44996}
2.	MligTC455_38654	12843	267.57	Mlig455_011033, Mlig455_033994	Neo: - Age: -	RPL26	3.226	0.757	-	-	0.769	0.958	0.742	Mlig455_011033 {REF} {Length: 593} {TRANSSPLICED} {Pfam: Ribosomal proteins L26 eukaryotic, L24P archaeal [PF16906.7, score=128.1]; KOW motif [PF00467.31, score=28.8]} {Human: ENSG00000161970, RPL26, ribosomal protein L26, [RH, Score=213, Expect=1e-71]; ENSG00000037241, RPL26L1, ribosomal protein L26 like 1, [RH, Score=212, Expect=2e-71]} {Mouse: ENSMUSG00000060938, Rpl26, ribosomal protein L26, [RH, Score=213, Expect=8e-72]} {Dmel: FBgn0036825, RpL26, Ribosomal protein L26, [RH, Score=202, Expect=8e-68]} {Celegans: WBGene00004440, rpl-26, 60S ribosomal protein L26, [RH, Score=168, Expect=1e-54]} {Smed: dd_Smed_v6_235_0_1, dd_Smed_v6_235_0_1, [RH, Score=180, Expect=3e-59]} {RNA1509_11869, RNA1509_5108} {RNA1310_59658.1, RNA1509_11869} {RNA1509_11869, RNA815_26744.1} Mlig455_033994 {REF} {Length: 1776} {RNA1509_26962} {RNA1310_56468} {RNA815_30314}
3.	MligTC455_27858	592	12.34	Mlig455_063432	Neo: Neoblast, stringent Age: - Regeneration-upregulated R6: 2.046 Regeneration-enriched R6: 2.046	NUDCD1	1.84	-	-	0.885	-	-	0.955	Mlig455_063432 {REF} {Length: 3337} {TRANSSPLICED} {Pfam: CS domain [PF04969.18, score=25.2]} {Human: ENSG00000120526, NUDCD1, NudC domain containing 1, [RH, Score=323, Expect=5e-102]} {Mouse: ENSMUSG00000038736, Nudcd1, NudC domain containing 1, [RH, Score=315, Expect=4e-99]} {Dmel: FBgn0030342, CG10347, [RH, Score=108, Expect=1e-24]} {Celegans: WBGene00016654, C44E4.5, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_3736_0_1, dd_Smed_v6_3736_0_1, [RH, Score=87.8, Expect=4e-18]} {RNA1509_9333} {RNA1310_11524.1, RNA1509_9333} {RNA1509_9333, RNA815_4347}
4.	MligTC455_48412	1608	33.5	Mlig455_067102	Neo: - Age: Down-Down-Up		1.817	-	-	-	-	0.955	0.862	Mlig455_067102 {REF} {Length: 1614} {TRANSSPLICED} {RNA1509_18861} {RNA1310_41212} {RNA815_44029}
5.	MligTC455_44192	1330	27.7	Mlig455_069040	Neo: - Age: -		1.806	-	-	-	-	0.955	0.851	Mlig455_069040 {REF} {Length: 4668} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1310_17993, RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892, RNA815_30434.1}
6.	MligTC455_19019	800	16.66	Mlig455_065776, Mlig455_065799	Neo: - Age: logFC(26M/2M)=0.401	SPATA5	1.718	0.767	-	-	-	-	0.951	Mlig455_065776 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=194.3]; AAA ATPase domain [PF13191.8, score=40.9]; AAA+ lid domain [PF17862.3, score=36.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=33.3]; AAA domain [PF13671.8, score=27.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.1]; Protein of unknown function (DUF815) [PF05673.15, score=23.5]; TIP49 P-loop domain [PF06068.15, score=22.4]; AAA domain [PF13173.8, score=20.5]; RNA helicase [PF00910.24, score=20.0]} {Human: ENSG00000145375, SPATA5, spermatogenesis associated 5, [Score=273, Expect=2e-78]} {Mouse: ENSMUSG00000027722, Spata5, spermatogenesis associated 5, [Score=280, Expect=3e-81]} {Dmel: FBgn0261014, TER94, [Score=263, Expect=3e-76]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [Score=251, Expect=8e-72]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [Score=237, Expect=7e-67]} {RNA1509_10485, RNA1509_17740} {RNA1310_8530.1, RNA1509_17740} {RNA1509_17740, RNA815_905} Mlig455_065799 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=194.3]; AAA ATPase domain [PF13191.8, score=40.9]; AAA+ lid domain [PF17862.3, score=36.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=33.3]; AAA domain [PF13671.8, score=27.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.1]; Protein of unknown function (DUF815) [PF05673.15, score=23.5]; TIP49 P-loop domain [PF06068.15, score=22.4]; AAA domain [PF13173.8, score=20.5]; RNA helicase [PF00910.24, score=20.0]} {Human: ENSG00000145375, SPATA5, spermatogenesis associated 5, [Score=273, Expect=2e-78]} {Mouse: ENSMUSG00000027722, Spata5, spermatogenesis associated 5, [Score=280, Expect=2e-81]} {Dmel: FBgn0261014, TER94, [Score=263, Expect=3e-76]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [Score=251, Expect=8e-72]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [Score=237, Expect=7e-67]} {RNA1509_10485} {RNA1310_8530.1, RNA1509_10485} {RNA1509_10485, RNA815_905}
7.	MligTC455_18852	3800	79.16	Mlig455_003950, Mlig455_005977	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.873/0.00000 Region-enriched R4: 1.365/0.00002	MRPL45	1.71	0.748	-	-	-	-	0.962	Mlig455_003950 {REF} {Length: 1105} {TRANSSPLICED} {Human: ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=4e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.9, Expect=1e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.3, Expect=8e-12]} {RNA1509_16114} {RNA1310_30839} {RNA815_14208} Mlig455_005977 {REF} {Length: 1105} {TRANSSPLICED} {Human: ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=3e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.2, Expect=2e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.5, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=65.9, Expect=2e-12]} {RNA1509_16114} {RNA1310_30839} {RNA815_14208}
8.	MligTC455_27742	216	4.49	Mlig455_020706	Neo: Irradiation Age: - Region-enriched R2: 4.070/0.03422 Region-enriched R5: 2.875/0.00106	TMED3	1.694	-	0.733	-	-	0.961	-	Mlig455_020706 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.1]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=75.9, Expect=4e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.9, Expect=2e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=74.7, Expect=7e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=73.9, Expect=1e-14]} {Dmel: FBgn0051787, CG31787, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=84.7, Expect=4e-18]} {RNA1509_20798} {RNA1310_17461} {RNA815_5363}
9.	MligTC455_36717	35	0.73	Mlig455_059936	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_059936 {REF} {Length: 2335} {RNA1509_30606} {RNA1310_30834}
10.	MligTC455_50471	2045	42.6	Mlig455_014184, Mlig455_014206	Neo: Neoblast Age: Down-Up-Up	DDX47	0.962	-	-	-	-	-	0.962	Mlig455_014184 {REF} {Length: 1814} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=102.3]; DEAD/DEAH box helicase [PF00270.31, score=77.4]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [Score=404, Expect=2e-135]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [Score=406, Expect=3e-136]} {Dmel: FBgn0032919, CG9253, [Score=402, Expect=3e-134]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [Score=369, Expect=1e-121]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [Score=259, Expect=6e-80]} {RNA1509_30912} {RNA1310_18278} {RNA815_16.1} Mlig455_014206 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.1]; Helicase conserved C-terminal domain [PF00271.33, score=108.2]; Type III restriction enzyme, res subunit [PF04851.17, score=29.3]; AAA domain [PF13245.8, score=25.2]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [RH, Score=528, Expect=0.0]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0032919, CG9253, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [RH, Score=483, Expect=2e-168]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [RH, Score=373, Expect=1e-125]} {RNA1509_30912, RNA1509_6396} {RNA1310_18278, RNA1509_30912, RNA1509_6396} {RNA1509_30912, RNA1509_6396, RNA815_16.1}
11.	MligTC455_21760	34	0.71	Mlig455_013840	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_013840 {REF} {Length: 1645} {RNA1310_30834}
12.	MligTC455_15937	229	4.78	Mlig455_018627	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.547	TRAPPC5	0.952	-	-	-	-	-	0.952	Mlig455_018627 {REF} {Length: 741} {TRANSSPLICED} {Pfam: Transport protein particle (TRAPP) component [PF04051.18, score=102.9]} {Human: ENSG00000181029, TRAPPC5, trafficking protein particle complex 5, [RH, Score=173, Expect=1e-54]} {Mouse: ENSMUSG00000040236, Trappc5, trafficking protein particle complex 5, [RH, Score=172, Expect=8e-55]} {Dmel: FBgn0266723, Trs31, TRAPP subunit 31, [RH, Score=163, Expect=5e-51]} {Smed: dd_Smed_v6_4583_0_1, dd_Smed_v6_4583_0_1, [RH, Score=163, Expect=2e-51]} {RNA1509_33004, RNA1509_57725} {RNA1310_50386, RNA1509_57725} {RNA1509_57725, RNA815_23609}

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