Data search
Results for MligTC455_32648
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32648 | 733 | 15.26 | Mlig455_010039, Mlig455_054061 | Neo: Int S/G2/M Age: - |
RNF216 | Mlig455_010039 {REF} {Length: 3772} {TRANSSPLICED} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=63.5, Expect=9e-10]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=64.3, Expect=3e-10]} {RNA1509_11991} {RNA1310_5179.1} {RNA815_2157.1} Mlig455_054061 {REF} {Length: 3205} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=30.0]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [RH, Score=201, Expect=3e-54]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [RH, Score=202, Expect=6e-55]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=66.6, Expect=4e-11]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=70.5, Expect=1e-12]} {Smed: dd_Smed_v6_1802_0_2, dd_Smed_v6_1802_0_2, [Score=50.8, Expect=1e-06]} {RNA1509_11991} {RNA1310_5179.1} {RNA815_2157.1} |
Cumulative graph for MligTC455_32648
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.361 | 4.28 | 0.72861 | 1.00000 | |
| RegionR2 | -0.533 | 4.28 | 0.38197 | 0.77678 | |
| RegionR3 | -0.06 | 4.28 | 0.90495 | 1.00000 | |
| RegionR4 | 0.897 | 4.28 | 0.07925 | 0.26325 | |
| RegionR5 | 0.922 | 4.28 | 0.02261 | 0.10584 | |
| RegionR6 | -0.255 | 4.28 | 0.60999 | 1.00000 | |
| RegionR7 | -0.589 | 4.28 | 0.35581 | 0.99201 | |
| RegionR8 | -0.743 | 4.28 | 0.34894 | 0.98272 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.054 | 4.28 | 0.08250 | 0.78111 | |
| RegenerationR2 | 0.902 | 4.28 | 0.10870 | 0.51633 | |
| RegenerationR3 | 0.972 | 4.28 | 0.09484 | 0.49470 | |
| RegenerationR4 | 0.088 | 4.28 | 0.87198 | 1.00000 | |
| RegenerationR5 | 0.467 | 4.28 | 0.35737 | 0.76925 | |
| RegenerationR6 | 1.386 | 4.28 | 0.01483 | 0.14991 | |
| RegenerationBL | 1.266 | 4.28 | 0.04741 | 0.24929 | |
| RegenerationTP | 0.439 | 4.28 | 0.55871 | 0.93785 |
Genes with expression patterns similar to MligTC455_32648
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32648 | 733 | 15.26 | Mlig455_010039, Mlig455_054061 | Neo: Int S/G2/M Age: - |
RNF216 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010039 {REF} {Length: 3772} {TRANSSPLICED} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=63.5, Expect=9e-10]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=64.3, Expect=3e-10]} {RNA1509_11991} {RNA1310_5179.1} {RNA815_2157.1} Mlig455_054061 {REF} {Length: 3205} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=30.0]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [RH, Score=201, Expect=3e-54]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [RH, Score=202, Expect=6e-55]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=66.6, Expect=4e-11]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=70.5, Expect=1e-12]} {Smed: dd_Smed_v6_1802_0_2, dd_Smed_v6_1802_0_2, [Score=50.8, Expect=1e-06]} {RNA1509_11991} {RNA1310_5179.1} {RNA815_2157.1} |
| 2. | MligTC455_27166 | 1113 | 23.18 | Mlig455_046219 | Neo: Int S/G2/M Age: Up-Down-Down |
BAZ1B | 2.555 | 0.775 | 0.951 | - | 0.829 | - | - | Mlig455_046219 {REF} {Length: 7068} {TRANSSPLICED} {Pfam: ATP-utilising chromatin assembly and remodelling N-terminal [PF10537.11, score=69.9]; Bromodomain [PF00439.27, score=69.7]; PHD-finger [PF00628.31, score=61.9]; Williams-Beuren syndrome DDT (WSD), D-TOX E motif [PF15613.8, score=51.6]; PHD-finger [PF13831.8, score=21.3]} {Human: ENSG00000009954, BAZ1B, bromodomain adjacent to zinc finger domain 1B, [RH, Score=283, Expect=1e-76]} {Mouse: ENSMUSG00000002748, Baz1b, bromodomain adjacent to zinc finger domain, 1B, [RH, Score=363, Expect=1e-102]} {Dmel: FBgn0033636, tou, toutatis, [RH, Score=102, Expect=4e-21]} {Celegans: WBGene00001470, baz-2, Bromodomain Adjacent to Zinc finger domain, 2A/2B, homolog, [RH, Score=72.0, Expect=4e-12]} {Smed: dd_Smed_v6_5428_0_1, dd_Smed_v6_5428_0_1, [RH, Score=451, Expect=3e-132]} {RNA1509_21911, RNA1509_3531, RNA1509_47176} {RNA1310_881.1, RNA1509_21911, RNA1509_3531, RNA1509_47176} {RNA1509_21911, RNA1509_3531, RNA1509_47176, RNA815_514} |
| 3. | MligTC455_07314 | 687 | 14.32 | Mlig455_000525 | Neo: Irradiation Age: - Region-enriched R5: 1.319/0.00385 |
SIN3B | 1.803 | - | - | - | 0.852 | - | 0.951 | Mlig455_000525 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=97.0]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [Score=186, Expect=1e-48]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [Score=196, Expect=3e-52]} {Dmel: FBgn0022764, Sin3A, [Score=147, Expect=2e-36]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=97.4, Expect=9e-21]} {RNA1509_4899} {RNA1310_4266.2} {RNA815_1997} |
| 4. | MligTC455_09419 | 952 | 19.83 | Mlig455_028591, Mlig455_028608 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.336 Region-enriched R5: 1.990/0.00000 |
ENGASE, RNASEH2B | 1.766 | - | - | - | 0.812 | - | 0.954 | Mlig455_028591 {REF} {Length: 1343} {TRANSSPLICED} {Pfam: Ydr279p protein triple barrel domain [PF17745.3, score=28.3]} {Human: ENSG00000136104, RNASEH2B, ribonuclease H2 subunit B, [RH, Score=67.4, Expect=3e-12]} {Mouse: ENSMUSG00000021932, Rnaseh2b, ribonuclease H2, subunit B, [RH, Score=57.4, Expect=5e-09]} {Smed: dd_Smed_v6_20152_0_1, dd_Smed_v6_20152_0_1, [RH, Score=65.9, Expect=3e-12]} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1310_23646.1, RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114} {RNA1509_27969, RNA1509_35889, RNA1509_39155, RNA1509_41641, RNA1509_47130, RNA1509_53114, RNA815_10770.1} Mlig455_028608 {REF} {Length: 2849} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 85 [PF03644.15, score=256.7]} {Human: ENSG00000167280, ENGASE, endo-beta-N-acetylglucosaminidase, [RH, Score=208, Expect=5e-61]} {Mouse: ENSMUSG00000033857, Engase, endo-beta-N-acetylglucosaminidase, [RH, Score=196, Expect=7e-57]} {Dmel: FBgn0030839, CG5613, [RH, Score=202, Expect=1e-59]} {Celegans: WBGene00017164, eng-1, Endo-b-N-acetylGlucosaminidase; Endo-beta-N-acetylglucosaminidase, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_12165_0_3, dd_Smed_v6_12165_0_3, [RH, Score=205, Expect=2e-63]} {RNA1509_24522} {RNA1310_22368} {RNA815_10770.1} |
| 5. | MligTC455_46525 | 451 | 9.4 | Mlig455_058272 | Neo: - |
1.756 | 0.806 | - | - | - | 0.950 | - | Mlig455_058272 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: Ribosomal protein S15 [PF00312.24, score=27.0]} {RNA1509_10430, RNA1509_39368, RNA1509_40148} {RNA1310_25852, RNA1509_39368, RNA1509_40148} {RNA1509_39368, RNA1509_40148, RNA815_10720} | |
| 6. | MligTC455_26504 | 810 | 16.88 | Mlig455_055309 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 2.415 |
CPSF6 | 1.74 | - | - | - | 0.950 | - | 0.790 | Mlig455_055309 {REF} {Length: 4121} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=26.5]} {Human: ENSG00000111605, CPSF6, cleavage and polyadenylation specific factor 6, [RH, Score=140, Expect=5e-35]} {Mouse: ENSMUSG00000055531, Cpsf6, cleavage and polyadenylation specific factor 6, [RH, Score=140, Expect=8e-35]} {Dmel: FBgn0035872, CG7185, [RH, Score=131, Expect=1e-31]} {Celegans: WBGene00008362, cfim-2, Cleavage Factor IM (CFIm) homolog, [RH, Score=93.2, Expect=8e-20]} {Smed: dd_Smed_v6_4839_0_1, dd_Smed_v6_4839_0_1, [RH, Score=154, Expect=2e-40]} {RNA1509_8357} {RNA1310_4508, RNA1509_8357} {RNA1509_8357, RNA815_15488} |
| 7. | MligTC455_28536 | 635 | 13.23 | Mlig455_008567 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.242/0.00328 |
TASP1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_008567 {REF} {Length: 1546} {TRANSSPLICED} {Pfam: Asparaginase [PF01112.20, score=114.7]} {Human: ENSG00000089123, TASP1, taspase 1, [RH, Score=192, Expect=6e-56]} {Mouse: ENSMUSG00000039033, Tasp1, taspase, threonine aspartase 1, [RH, Score=177, Expect=1e-50]} {Dmel: FBgn0263602, Tasp1, Taspase 1, [RH, Score=130, Expect=1e-33]} {Smed: dd_Smed_v6_8716_1_1, dd_Smed_v6_8716_1_1, [RH, Score=159, Expect=1e-44]} {RNA1509_8921} {RNA1310_17191, RNA1509_8921} {RNA1509_8921, RNA815_26699} |
| 8. | MligTC455_47897 | 1453 | 30.28 | Mlig455_057771 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.541/0.00000 |
ASF1A | 0.954 | - | - | - | - | - | 0.954 | Mlig455_057771 {REF} {Length: 1164} {TRANSSPLICED} {Pfam: ASF1 like histone chaperone [PF04729.15, score=215.3]} {Human: ENSG00000111875, ASF1A, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=3e-68]; ENSG00000105011, ASF1B, anti-silencing function 1B histone chaperone, [RH, Score=201, Expect=1e-64]} {Mouse: ENSMUSG00000019857, Asf1a, anti-silencing function 1A histone chaperone, [RH, Score=211, Expect=1e-68]; ENSMUSG00000005470, Asf1b, anti-silencing function 1B histone chaperone, [RH, Score=205, Expect=3e-66]} {Dmel: FBgn0029094, asf1, anti-silencing factor 1, [RH, Score=206, Expect=1e-66]} {Celegans: WBGene00007277, asfl-1, Probable histone chaperone asf-1-like protein, [RH, Score=171, Expect=1e-52]} {Smed: dd_Smed_v6_5120_0_1, dd_Smed_v6_5120_0_1, [RH, Score=211, Expect=1e-68]} {RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1310_10040, RNA1509_22702, RNA1509_23173, RNA1509_32748} {RNA1509_22702, RNA1509_23173, RNA1509_32748, RNA815_13388} |
| 9. | MligTC455_48550 | 2150 | 44.79 | Mlig455_025093, Mlig455_025098 | Neo: - Age: - |
TLK2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_025093 {REF} {Length: 5109} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=174.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.4]} {Human: ENSG00000146872, TLK2, tousled like kinase 2, [RH, Score=511, Expect=9e-170]} {Mouse: ENSMUSG00000020694, Tlk2, tousled-like kinase 2 (Arabidopsis), [RH, Score=511, Expect=6e-170]} {Dmel: FBgn0283657, Tlk, Tousled-like kinase, [Score=442, Expect=3e-138]} {Celegans: WBGene00006579, tlk-1, Serine/threonine-protein kinase tousled-like 1, [Score=440, Expect=5e-141]} {Smed: dd_Smed_v6_6431_0_1, dd_Smed_v6_6431_0_1, [Score=515, Expect=6e-174]} {RNA1509_8060} {RNA1310_6226} {RNA815_3540} Mlig455_025098 {REF} {Length: 5172} {Pfam: Protein kinase domain [PF00069.27, score=195.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]} {Human: ENSG00000146872, TLK2, tousled like kinase 2, [RH, Score=536, Expect=2e-178]; ENSG00000198586, TLK1, tousled like kinase 1, [RH, Score=517, Expect=6e-171]} {Mouse: ENSMUSG00000020694, Tlk2, tousled-like kinase 2 (Arabidopsis), [RH, Score=535, Expect=2e-178]; ENSMUSG00000041997, Tlk1, tousled-like kinase 1, [RH, Score=518, Expect=9e-172]} {Dmel: FBgn0283657, Tlk, Tousled-like kinase, [RH, Score=474, Expect=1e-147]} {Celegans: WBGene00006579, tlk-1, Serine/threonine-protein kinase tousled-like 1, [RH, Score=476, Expect=2e-153]} {Smed: dd_Smed_v6_6431_0_1, dd_Smed_v6_6431_0_1, [RH, Score=575, Expect=0.0]} {RNA1509_29351, RNA1509_8060} {RNA1310_6226, RNA1509_29351, RNA1509_8060} {RNA1509_29351, RNA1509_8060, RNA815_3540} |