Data search


search
Exact
Search

Results for MligTC455_32740

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32740 3 0.06 Mlig455_055569

Neo: -

Age: -

NYNRIN Mlig455_055569 {REF} {Length: 5134} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.2]; Integrase zinc binding domain [PF17921.3, score=57.3]; Integrase core domain [PF00665.28, score=48.5]; Integrase core domain [PF13683.8, score=21.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.3, Expect=1e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=71.6, Expect=7e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=279, Expect=4e-78]} {RNA1509_23236} {RNA1310_35877} {RNA815_23350}

Cumulative graph for MligTC455_32740

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_32740

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_02244 25 0.53 Mlig455_026007, Mlig455_070432

Neo: -

Age: -

1 - - - - - 1.000

Mlig455_026007 {REF} {Length: 604} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [Score=91.3, Expect=3e-24]} {RNA1310_143494}

Mlig455_070432 {REF} {Length: 1561} {Dmel: FBgn0050419, CG30419, [RH, Score=61.6, Expect=1e-11]} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [RH, Score=112, Expect=2e-32]} {RNA1310_143494}
2. MligTC455_06446 8 0.16 Mlig455_029900

Neo: -

Age: -

SETMAR 1 - - - - - 1.000 Mlig455_029900 {REF} {Length: 1117} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=37.7]; Homeodomain-like domain [PF13565.8, score=30.0]; Winged helix-turn helix [PF13551.8, score=27.0]; Homeodomain-like domain [PF13384.8, score=21.8]; Helix-turn-helix domain [PF13518.8, score=19.4]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.2]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=77.0, Expect=3e-16]} {RNA1310_3855.1} {RNA815_19895}
3. MligTC455_32740 3 0.06 Mlig455_055569

Neo: -

Age: -

NYNRIN 1 - - - - - 1.000 Mlig455_055569 {REF} {Length: 5134} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=119.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.2]; Integrase zinc binding domain [PF17921.3, score=57.3]; Integrase core domain [PF00665.28, score=48.5]; Integrase core domain [PF13683.8, score=21.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.3, Expect=1e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=71.6, Expect=7e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=279, Expect=4e-78]} {RNA1509_23236} {RNA1310_35877} {RNA815_23350}
4. MligTC455_46519 27 0.55 Mlig455_017079

Neo: -

Age: -

GSX1 0.996 - - - - - 0.996 Mlig455_017079 {REF} {Length: 1597} {Pfam: Homeodomain [PF00046.31, score=74.9]} {Human: ENSG00000169840, GSX1, GS homeobox 1, [RH, Score=113, Expect=1e-28]; ENSG00000180613, GSX2, GS homeobox 2, [RH, Score=112, Expect=7e-28]} {Mouse: ENSMUSG00000035946, Gsx2, GS homeobox 2, [RH, Score=116, Expect=2e-29]; ENSMUSG00000053129, Gsx1, GS homeobox 1, [RH, Score=113, Expect=8e-29]} {Dmel: FBgn0025776, ind, intermediate neuroblasts defective, [RH, Score=101, Expect=5e-24]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=84.0, Expect=2e-18]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [Score=89.7, Expect=5e-20]} {RNA1509_16173} {RNA1310_59151} {RNA815_3140.1}
5. MligTC455_37504 12 0.24 Mlig455_050718

Neo: -

Age: -

0.979 - - - - - 0.979 Mlig455_050718 {REF} {Length: 1019} {NoTransDecoderORF} {RNA1509_59554} {RNA1310_41436.2} {RNA815_9685.2}
6. MligTC455_56114 10 0.2 Mlig455_062554

Neo: -

Age: -

0.967 - - - - - 0.967 Mlig455_062554 {REF} {Length: 435} {NoTransDecoderORF} {RNA1509_2762} {RNA1310_23298} {RNA815_59053.1}
7. MligTC455_26296 29 0.6 Mlig455_039775

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.567

0.958 - - - - - 0.958 Mlig455_039775 {REF} {Length: 11147} {RNA1509_17190} {RNA1310_9848.1} {RNA815_5685.1}
8. MligTC455_09070 40 0.83 Mlig455_054261

Neo: -

Age: logFC(26M/2M)=-1.099

ABCG2 0.957 - - - - - 0.957 Mlig455_054261 {REF} {Length: 2386} {Pfam: ABC transporter [PF00005.29, score=94.1]; ABC-2 type transporter [PF01061.26, score=66.5]; ABC-2 type transporter [PF19055.2, score=53.7]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=29.4]; AAA domain [PF13401.8, score=19.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=18.6]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=202, Expect=5e-56]; ENSG00000143921, ABCG8, ATP binding cassette subfamily G member 8, [Score=200, Expect=5e-55]} {Mouse: ENSMUSG00000024254, Abcg8, ATP binding cassette subfamily G member 8, [Score=200, Expect=3e-55]; ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=200, Expect=3e-55]} {Dmel: FBgn0003996, w, white, [Score=226, Expect=9e-65]} {Celegans: WBGene00008950, wht-5, WHiTe (Drosophila) related ABC transporter, [RH, Score=231, Expect=2e-66]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [Score=193, Expect=5e-53]} {RNA1509_27156} {RNA1310_7789, RNA1509_27156} {RNA1509_27156, RNA815_12366}
9. MligTC455_35814 4724 98.43 Mlig455_025469, Mlig455_071140

Neo: -

Age: logFC(26M/2M)=-0.388

Region-enriched R7: 2.873/0.00000

Regeneration-downregulated BL: -4.755

Regeneration-depleted BL: -4.755

METTL27 0.955 - - - - - 0.955

Mlig455_025469 {REF} {Length: 1274} {Pfam: Methyltransferase domain [PF13489.8, score=43.4]; Methyltransferase domain [PF13649.8, score=41.9]; Methyltransferase domain [PF08242.14, score=35.7]; Methyltransferase domain [PF08241.14, score=31.5]; Methyltransferase domain [PF13847.8, score=31.5]; Methyltransferase small domain [PF05175.16, score=22.7]} {Human: ENSG00000165171, METTL27, methyltransferase like 27, [Score=82.4, Expect=2e-18]} {Mouse: ENSMUSG00000040557, Mettl27, methyltransferase like 27, [Score=73.2, Expect=2e-15]} {Smed: dd_Smed_v6_5458_0_1, dd_Smed_v6_5458_0_1, [Score=89.0, Expect=1e-21]} {RNA1509_3513} {RNA1310_27100.1} {RNA815_15185}

Mlig455_071140 {REF} {Length: 1274} {Pfam: Methyltransferase domain [PF13489.8, score=43.3]; Methyltransferase domain [PF13649.8, score=42.0]; Methyltransferase domain [PF08242.14, score=34.3]; Methyltransferase domain [PF08241.14, score=31.9]; Methyltransferase domain [PF13847.8, score=31.5]; Methyltransferase small domain [PF05175.16, score=21.9]} {Human: ENSG00000165171, METTL27, methyltransferase like 27, [Score=84.0, Expect=4e-19]} {Mouse: ENSMUSG00000040557, Mettl27, methyltransferase like 27, [Score=74.7, Expect=5e-16]} {Smed: dd_Smed_v6_5458_0_1, dd_Smed_v6_5458_0_1, [Score=89.4, Expect=8e-22]} {RNA1509_21964, RNA1509_3513, RNA1509_59485} {RNA1310_27100.1, RNA1509_21964, RNA1509_3513, RNA1509_59485} {RNA1509_21964, RNA1509_3513, RNA1509_59485, RNA815_15185}
10. MligTC455_47544 42 0.88 Mlig455_055595, Mlig455_055624

Neo: -

Age: -

RASL10B 0.954 - - - - - 0.954

Mlig455_055595 {REF} {Length: 1887} {Pfam: Ras family [PF00071.24, score=75.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=34.0]; AAA ATPase domain [PF13191.8, score=20.2]} {Human: ENSG00000270885, RASL10B, RAS like family 10 member B, [Score=151, Expect=2e-44]} {Mouse: ENSMUSG00000020684, Rasl10b, RAS-like, family 10, member B, [Score=151, Expect=2e-44]} {Dmel: FBgn0037326, CG14669, [Score=112, Expect=1e-28]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [Score=54.7, Expect=7e-09]} {Smed: dd_Smed_v6_13540_0_1, dd_Smed_v6_13540_0_1, [Score=186, Expect=3e-57]} {RNA1310_59421} {RNA815_58204}

Mlig455_055624 {REF} {Length: 1840} {Pfam: Ras family [PF00071.24, score=74.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=33.3]; AAA ATPase domain [PF13191.8, score=19.8]} {Human: ENSG00000270885, RASL10B, RAS like family 10 member B, [Score=150, Expect=4e-44]} {Mouse: ENSMUSG00000020684, Rasl10b, RAS-like, family 10, member B, [Score=152, Expect=6e-45]} {Dmel: FBgn0037326, CG14669, [Score=111, Expect=2e-28]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [Score=56.2, Expect=2e-09]} {Smed: dd_Smed_v6_13540_0_1, dd_Smed_v6_13540_0_1, [Score=186, Expect=3e-57]} {RNA1310_59421} {RNA815_58204}
11. MligTC455_30232 9 0.19 Mlig455_005767, Mlig455_005811, Mlig455_026047, Mlig455_041737, Mlig455_053353, Mlig455_062346, Mlig455_064252

Neo: -

Age: -

SETMAR 0.953 - - - - - 0.953

Mlig455_005767 {REF} {Length: 915} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.3]; Transposase (partial DDE domain) [PF01359.20, score=28.9]; Homeodomain-like domain [PF13565.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=159, Expect=2e-43]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_005811 {REF} {Length: 1259} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.3]; Transposase (partial DDE domain) [PF01359.20, score=28.9]; Homeodomain-like domain [PF13565.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=159, Expect=2e-43]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_026047 {REF} {Length: 1063} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.5]; Homeodomain-like domain [PF13565.8, score=29.4]; Transposase (partial DDE domain) [PF01359.20, score=28.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=160, Expect=7e-44]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_041737 {REF} {Length: 1197} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.1]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase (partial DDE domain) [PF01359.20, score=25.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=96.7, Expect=4e-22]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_053353 {REF} {Length: 1431} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.5]; Homeodomain-like domain [PF13565.8, score=29.4]; Transposase (partial DDE domain) [PF01359.20, score=28.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=160, Expect=7e-44]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_062346 {REF} {Length: 1469} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.5]; Homeodomain-like domain [PF13565.8, score=29.4]; Transposase (partial DDE domain) [PF01359.20, score=28.1]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=160, Expect=6e-44]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}

Mlig455_064252 {REF} {Length: 1410} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=51.5]; Homeodomain-like domain [PF13565.8, score=29.4]; Transposase (partial DDE domain) [PF01359.20, score=28.8]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=160, Expect=7e-44]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-11]} {RNA1509_27993} {RNA1310_29590.2} {RNA815_7268.1}
12. MligTC455_52383 163 3.39 Mlig455_015020

Neo: -

Age: Up-Down-Up

Region-enriched R2: 4.308/0.00258
Region-enriched R3: 3.148/0.00138

ERP44 0.953 - - - - - 0.953 Mlig455_015020 {REF} {Length: 2574} {Pfam: Thioredoxin-like domain [PF13848.8, score=106.0]; Thioredoxin [PF00085.22, score=64.2]; Calsequestrin [PF01216.19, score=19.9]} {Human: ENSG00000023318, ERP44, endoplasmic reticulum protein 44, [Score=244, Expect=1e-76]} {Mouse: ENSMUSG00000028343, Erp44, endoplasmic reticulum protein 44, [Score=251, Expect=1e-79]} {Dmel: FBgn0030734, CG9911, [Score=239, Expect=3e-75]} {Celegans: WBGene00016278, erp-44.1, [Score=238, Expect=5e-75]} {Smed: dd_Smed_v6_2276_0_1, dd_Smed_v6_2276_0_1, [Score=238, Expect=7e-75]} {RNA1509_48143} {RNA1310_14258.1} {RNA815_8957.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA