Data search
Results for MligTC455_32855
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32855 | 446 | 9.30 | Mlig455_048275 | Neo: - |
IFIH1 | Mlig455_048275 {REF} {Length: 3726} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=68.4]; DEAD/DEAH box helicase [PF00270.31, score=62.9]; Helicase conserved C-terminal domain [PF00271.33, score=55.0]; C-terminal domain of RIG-I [PF11648.10, score=39.4]; RIG-I receptor C-terminal domain [PF18119.3, score=32.1]; AAA domain [PF13245.8, score=31.1]; SWI2/SNF2 ATPase [PF18766.3, score=24.3]; UvrD/REP helicase N-terminal domain [PF00580.23, score=19.9]; PhoH-like protein [PF02562.18, score=18.1]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [RH, Score=259, Expect=9e-72]; ENSG00000108771, DHX58, DExH-box helicase 58, [RH, Score=256, Expect=7e-73]} {Mouse: ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [RH, Score=240, Expect=2e-67]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=65.5, Expect=3e-10]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=192, Expect=8e-51]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=324, Expect=7e-94]} {RNA1509_4585} {RNA1310_1259, RNA1509_4585} {RNA1509_4585, RNA815_1036} |
Cumulative graph for MligTC455_32855
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.021 | 3.636 | 0.38076 | 1.00000 | |
| RegionR2 | -1.249 | 3.636 | 0.06860 | 0.31847 | |
| RegionR3 | 0.53 | 3.636 | 0.29592 | 0.83763 | |
| RegionR4 | 1.066 | 3.636 | 0.09623 | 0.29938 | |
| RegionR5 | -0.457 | 3.636 | 0.35799 | 0.70940 | |
| RegionR6 | 0.134 | 3.636 | 0.79009 | 1.00000 | |
| RegionR7 | -1.085 | 3.636 | 0.13405 | 0.68858 | |
| RegionR8 | 0.041 | 3.636 | 0.95505 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.386 | 3.636 | 0.80429 | 1.00000 | |
| RegenerationR2 | 0.335 | 3.636 | 0.61389 | 0.92069 | |
| RegenerationR3 | -1.429 | 3.636 | 0.03240 | 0.32079 | |
| RegenerationR4 | -1.576 | 3.636 | 0.02687 | 0.26353 | |
| RegenerationR5 | -0.158 | 3.636 | 0.80754 | 0.99053 | |
| RegenerationR6 | -0.054 | 3.636 | 0.93517 | 1.00000 | |
| RegenerationBL | -0.726 | 3.636 | 0.38689 | 0.75520 | |
| RegenerationTP | -0.288 | 3.636 | 0.73462 | 1.00000 |
Genes with expression patterns similar to MligTC455_32855
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32855 | 446 | 9.3 | Mlig455_048275 | Neo: - |
IFIH1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048275 {REF} {Length: 3726} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=68.4]; DEAD/DEAH box helicase [PF00270.31, score=62.9]; Helicase conserved C-terminal domain [PF00271.33, score=55.0]; C-terminal domain of RIG-I [PF11648.10, score=39.4]; RIG-I receptor C-terminal domain [PF18119.3, score=32.1]; AAA domain [PF13245.8, score=31.1]; SWI2/SNF2 ATPase [PF18766.3, score=24.3]; UvrD/REP helicase N-terminal domain [PF00580.23, score=19.9]; PhoH-like protein [PF02562.18, score=18.1]} {Human: ENSG00000115267, IFIH1, interferon induced with helicase C domain 1, [RH, Score=259, Expect=9e-72]; ENSG00000108771, DHX58, DExH-box helicase 58, [RH, Score=256, Expect=7e-73]} {Mouse: ENSMUSG00000017830, Dhx58, DEXH (Asp-Glu-X-His) box polypeptide 58, [RH, Score=240, Expect=2e-67]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=65.5, Expect=3e-10]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=192, Expect=8e-51]} {Smed: dd_Smed_v6_3742_0_2, dd_Smed_v6_3742_0_2, [Score=324, Expect=7e-94]} {RNA1509_4585} {RNA1310_1259, RNA1509_4585} {RNA1509_4585, RNA815_1036} |
| 2. | MligTC455_23551 | 537 | 11.19 | Mlig455_007655 | Neo: - Age: - |
CSNK1G1 | 1.76 | - | 0.790 | - | - | - | 0.970 | Mlig455_007655 {REF} {Length: 4258} {Pfam: Protein kinase domain [PF00069.27, score=100.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.0]; Fungal protein kinase [PF17667.3, score=29.3]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=527, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=521, Expect=0.0]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=535, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=508, Expect=4e-178]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=512, Expect=0.0]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=462, Expect=2e-161]} {RNA1509_16024, RNA1509_20026} {RNA1310_20582.1, RNA1509_16024} {RNA1509_16024, RNA815_13120.1} |
| 3. | MligTC455_23552 | 539 | 11.23 | Mlig455_020886 | Neo: Irradiation Age: - |
CSNK1G1 | 1.754 | - | 0.786 | - | - | - | 0.968 | Mlig455_020886 {REF} {Length: 4055} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=100.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.0]; Fungal protein kinase [PF17667.3, score=29.4]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=527, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=524, Expect=0.0]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=535, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=520, Expect=0.0]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=515, Expect=0.0]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=513, Expect=0.0]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=462, Expect=1e-161]} {RNA1509_20026, RNA1509_31077} {RNA1310_19544.3, RNA1509_31077} {RNA1509_31077, RNA815_13120.1} |
| 4. | MligTC455_51742 | 226 | 4.71 | Mlig455_028329, Mlig455_066157 | Neo: - Age: - |
0.972 | - | - | 0.972 | - | - | - | Mlig455_028329 {REF} {Length: 2233} {RNA1509_24668} {RNA1310_11745} {RNA815_6094} Mlig455_066157 {REF} {Length: 2231} {RNA1509_24668} {RNA1310_11745} {RNA815_6094} |
|
| 5. | MligTC455_36684 | 103 | 2.15 | Mlig455_002052 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_002052 {REF} {Length: 1811} {RNA1310_36097} {RNA815_32539} | |
| 6. | MligTC455_31935 | 299 | 6.24 | Mlig455_046201 | Neo: - Age: - Region-enriched R1: 6.310/0.00233 |
0.961 | - | - | 0.961 | - | - | - | Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1} | |
| 7. | MligTC455_35649 | 2184 | 45.51 | Mlig455_044470 | Neo: - Age: logFC(26M/2M)=0.397 |
CALR | 0.961 | - | - | 0.961 | - | - | - | Mlig455_044470 {REF} {Length: 2189} {Pfam: Calreticulin family [PF00262.20, score=125.5]} {Human: ENSG00000179218, CALR, calreticulin, [Score=210, Expect=7e-66]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [Score=211, Expect=1e-66]} {Dmel: FBgn0005585, Calr, Calreticulin, [Score=196, Expect=4e-61]} {Celegans: WBGene00000802, crt-1, Calreticulin, [Score=225, Expect=1e-72]} {Smed: dd_Smed_v6_220_0_3, dd_Smed_v6_220_0_3, [Score=222, Expect=3e-71]} {RNA1509_145} {RNA1310_7869} {RNA815_3522.1} |
| 8. | MligTC455_48359 | 349 | 7.28 | Mlig455_017366 | Neo: - Age: Up-Down-Down Region-enriched R4: 2.538/0.00346 |
0.959 | - | - | 0.959 | - | - | - | Mlig455_017366 {REF} {Length: 4253} {Pfam: Death domain [PF00531.24, score=28.3]} {Mouse: ENSMUSG00000068036, Afdn, afadin, adherens junction formation factor, [Score=52.8, Expect=3e-06]} {Celegans: WBGene00002041, hum-8, Heavy chain, Unconventional Myosin, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_13807_0_1, dd_Smed_v6_13807_0_1, [Score=105, Expect=4e-23]} {RNA1509_29690} {RNA1310_5206.1} {RNA815_3494} | |
| 9. | MligTC455_28350 | 662 | 13.79 | Mlig455_067530 | Neo: - Age: Down-Up-Down |
RCCD1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_067530 {REF} {Length: 2354} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=87.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=53.3]} {Human: ENSG00000166965, RCCD1, RCC1 domain containing 1, [RH, Score=97.8, Expect=2e-22]} {Mouse: ENSMUSG00000038930, Rccd1, RCC1 domain containing 1, [RH, Score=98.6, Expect=1e-22]} {Dmel: FBgn0038917, CG6678, [RH, Score=86.7, Expect=9e-19]} {Celegans: WBGene00010768, K11D2.1, [RH, Score=76.6, Expect=4e-16]} {Smed: dd_Smed_v6_4912_0_1, dd_Smed_v6_4912_0_1, [RH, Score=96.3, Expect=2e-22]} {RNA1509_26302} {RNA1310_19707, RNA1509_26302} {RNA1509_26302, RNA815_10526} |
| 10. | MligTC455_27094 | 393 | 8.19 | Mlig455_066757 | Neo: Irradiation Age: Up-Down-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_066757 {REF} {Length: 3641} {TRANSSPLICED} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=119.4]} {RNA1509_6501} {RNA1310_3605.1} {RNA815_26244} | |
| 11. | MligTC455_05018 | 264 | 5.5 | Mlig455_054686 | Neo: - Age: - |
ATP11B | 0.956 | - | - | - | - | - | 0.956 | Mlig455_054686 {REF} {Length: 5712} {TRANSSPLICED} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=188.9]; Phospholipid-translocating ATPase N-terminal [PF16209.7, score=71.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=48.2]; E1-E2 ATPase [PF00122.22, score=43.2]; Cation transport ATPase (P-type) [PF13246.8, score=43.0]} {Human: ENSG00000058063, ATP11B, ATPase phospholipid transporting 11B (putative), [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000037400, Atp11b, ATPase, class VI, type 11B, [RH, Score=841, Expect=0.0]; ENSMUSG00000031441, Atp11a, ATPase, class VI, type 11A, [RH, Score=803, Expect=0.0]} {Dmel: FBgn0259221, CG42321, [Score=605, Expect=0.0]} {Celegans: WBGene00019166, tat-2, Phospholipid-transporting ATPase, [Score=566, Expect=0.0]} {Smed: dd_Smed_v6_10670_0_1, dd_Smed_v6_10670_0_1, [RH, Score=925, Expect=0.0]} {RNA1509_6335} {RNA1310_2362.1, RNA1509_6335} {RNA1509_6335, RNA815_3422} |
| 12. | MligTC455_40788 | 442 | 9.2 | Mlig455_048951 | Neo: - Age: - |
SUZ12 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_048951 {REF} {Length: 2627} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=250, Expect=2e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=253, Expect=1e-73]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=1e-49]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=193, Expect=3e-53]} {RNA1509_42645} {RNA1310_6938, RNA1509_42645} {RNA1509_42645, RNA815_5348} |
| 13. | MligTC455_29541 | 402 | 8.37 | Mlig455_063794 | Neo: - |
0.955 | - | - | 0.955 | - | - | - | Mlig455_063794 {REF} {Length: 3462} {TRANSSPLICED} {RNA1310_21809} {RNA815_37693} | |
| 14. | MligTC455_44765 | 2184 | 45.5 | Mlig455_037351 | Neo: Int S/G2/M Age: - |
ZFAND6 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_037351 {REF} {Length: 2645} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=39.0]; A20-like zinc finger [PF01754.18, score=30.5]} {Human: ENSG00000086666, ZFAND6, zinc finger AN1-type containing 6, [RH, Score=143, Expect=9e-42]} {Mouse: ENSMUSG00000030629, Zfand6, zinc finger, AN1-type domain 6, [RH, Score=146, Expect=8e-43]} {Dmel: FBgn0266410, CG45050, [Score=132, Expect=1e-37]} {Celegans: WBGene00009050, F22D6.2, [Score=112, Expect=1e-30]} {Smed: dd_Smed_v6_6909_0_1, dd_Smed_v6_6909_0_1, [Score=115, Expect=3e-31]} {RNA1509_18337} {RNA1310_9081.2} {RNA815_4488.1} |
| 15. | MligTC455_49992 | 377 | 7.85 | Mlig455_030016 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_030016 {REF} {Length: 5191} {TRANSSPLICED} {RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1310_6208.1, RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1509_16544, RNA1509_31079, RNA1509_38970, RNA815_18742} | |
| 16. | MligTC455_21027 | 1167 | 24.32 | Mlig455_019739 | Neo: - Age: logFC(26M/2M)=-0.527 |
MEX3B | 0.952 | - | - | - | - | 0.952 | - | Mlig455_019739 {REF} {Length: 2452} {Pfam: KH domain [PF00013.31, score=72.2]; NusA-like KH domain [PF13184.8, score=22.6]; KH domain [PF07650.19, score=20.4]; KH domain [PF13083.8, score=20.2]} {Human: ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=112, Expect=9e-27]; ENSG00000176624, MEX3C, mex-3 RNA binding family member C, [RH, Score=110, Expect=8e-26]} {Mouse: ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=112, Expect=6e-27]; ENSMUSG00000037253, Mex3c, mex3 RNA binding family member C, [RH, Score=110, Expect=4e-26]} {Dmel: FBgn0039920, CG11360, [Score=101, Expect=5e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=108, Expect=3e-26]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [RH, Score=70.5, Expect=4e-13]} {RNA1509_6767} {RNA1310_9378} {RNA815_11633.1} |
| 17. | MligTC455_21866 | 687 | 14.31 | Mlig455_019362 | Neo: Irradiation Age: - |
FOS | 0.951 | - | - | 0.951 | - | - | - | Mlig455_019362 {REF} {Length: 6528} {Pfam: bZIP transcription factor [PF00170.23, score=45.7]; Basic region leucine zipper [PF07716.17, score=29.3]; bZIP Maf transcription factor [PF03131.19, score=23.8]} {Human: ENSG00000170345, FOS, Fos proto-oncogene, AP-1 transcription factor subunit, [RH, Score=60.5, Expect=3e-09]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [Score=60.8, Expect=3e-10]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=74.3, Expect=1e-13]} {Celegans: WBGene00001345, fos-1, Transcription factor fos-1, [Score=57.0, Expect=2e-08]} {Smed: dd_Smed_v6_8835_0_1, dd_Smed_v6_8835_0_1, [RH, Score=53.5, Expect=1e-07]} {RNA1509_24169, RNA1509_30950, RNA1509_34345, RNA1509_35596} {RNA1310_17929.1, RNA1509_24169, RNA1509_30950, RNA1509_34345, RNA1509_35596} {RNA1509_24169, RNA1509_30950, RNA1509_34345, RNA1509_35596, RNA815_15089} |
| 18. | MligTC455_36358 | 787 | 16.41 | Mlig455_024262 | Neo: Int S/G2/M Age: - |
PEX6 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_024262 {REF} {Length: 2032} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=176.5]; AAA ATPase domain [PF13191.8, score=40.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=38.8]; AAA domain [PF13401.8, score=34.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.7]; TIP49 P-loop domain [PF06068.15, score=25.7]; AAA+ lid domain [PF17862.3, score=24.0]; AAA domain [PF13671.8, score=23.5]; RNA helicase [PF00910.24, score=23.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.8]; Rad17 P-loop domain [PF03215.17, score=21.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=19.5]; AAA domain [PF13238.8, score=19.3]; IstB-like ATP binding protein [PF01695.19, score=18.3]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.0]} {Human: ENSG00000124587, PEX6, peroxisomal biogenesis factor 6, [Score=278, Expect=8e-82]} {Mouse: ENSMUSG00000002763, Pex6, peroxisomal biogenesis factor 6, [Score=273, Expect=4e-80]} {Dmel: FBgn0033564, Pex6, Peroxin 6, [Score=256, Expect=2e-74]} {Celegans: WBGene00004195, prx-6, PEX6; PeRoXisome assembly factor; Pex6p homolog, [Score=233, Expect=2e-67]} {Smed: dd_Smed_v6_6906_0_1, dd_Smed_v6_6906_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_16683} {RNA1310_5166.1} {RNA815_11050} |
| 19. | MligTC455_49022 | 378 | 7.87 | Mlig455_008757 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_008757 {REF} {Length: 1456} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=24.1]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=19.0]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=130, Expect=5e-36]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1} |
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