TomoSeq data search

Data search

Results for MligTC455_32891

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32891

240

5.01

Mlig455_020398

Neo: -

Age: -

ZFYVE19

Mlig455_020398 {REF} {Length: 1343} {Pfam: FYVE zinc finger [PF01363.23, score=26.5]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=88.2, Expect=5e-19]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=123, Expect=3e-31]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}

Cumulative graph for MligTC455_32891

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.114	2.837	0.93495	1.00000
RegionR2	0.533	2.837	0.37849	0.77317
RegionR3	-0.257	2.837	0.57964	1.00000
RegionR4	-0.308	2.837	0.58648	0.90187
RegionR5	0.118	2.837	0.76549	1.00000
RegionR6	-0.165	2.837	0.73557	1.00000
RegionR7	0.472	2.837	0.45475	1.00000
RegionR8	-0.506	2.837	0.58178	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.262	2.837	0.32185	1.00000
RegenerationR2	0.252	2.837	0.56676	0.90113
RegenerationR3	0.29	2.837	0.59071	0.90383
RegenerationR4	0.331	2.837	0.53547	0.88632
RegenerationR5	0.521	2.837	0.21806	0.65273
RegenerationR6	-0.292	2.837	0.63466	0.89003
RegenerationBL	0.689	2.837	0.35329	0.72105
RegenerationTP	-0.727	2.837	0.43392	0.85576

Genes with expression patterns similar to MligTC455_32891

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32891	240	5.01	Mlig455_020398	Neo: - Age: -	ZFYVE19	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020398 {REF} {Length: 1343} {Pfam: FYVE zinc finger [PF01363.23, score=26.5]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=88.2, Expect=5e-19]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=123, Expect=3e-31]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}
2.	MligTC455_27440	207	4.31	Mlig455_050456	Neo: - Age: -	DCDC1	1.81	-	-	0.963	0.847	-	-	Mlig455_050456 {REF} {Length: 5764} {Pfam: Cep120 protein [PF12416.10, score=40.9]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=90.1, Expect=9e-18]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=57.8, Expect=3e-08]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282}
3.	MligTC455_47690	277	5.77	Mlig455_001541	Neo: - Age: -	UBTD2	0.962	-	-	0.962	-	-	-	Mlig455_001541 {REF} {Length: 3532} {Pfam: Ubiquitin-binding domain [PF16455.7, score=120.2]; Ubiquitin family [PF00240.25, score=33.4]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=216, Expect=7e-70]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=217, Expect=2e-70]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=3e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=199, Expect=3e-63]} {RNA1509_42408} {RNA1310_33971, RNA1509_42408} {RNA1509_42408, RNA815_29256}
4.	MligTC455_35435	632	13.16	Mlig455_067119	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.896 Region-enriched R2: 1.234/0.03490 Regeneration-downregulated R5: -1.845 Regeneration-depleted R5: -1.845		0.956	-	-	0.956	-	-	-	Mlig455_067119 {REF} {Length: 1795} {RNA1509_9585} {RNA1310_17157, RNA1509_9585} {RNA1509_9585, RNA815_623.1}
5.	MligTC455_42742	391	8.14	Mlig455_002747	Neo: - Age: -	SDF4	0.955	-	-	-	0.955	-	-	Mlig455_002747 {REF} {Length: 1553} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=63.0]; EF hand [PF13202.8, score=61.2]; EF-hand domain [PF13405.8, score=55.3]; EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13833.8, score=33.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.5]} {Human: ENSG00000078808, SDF4, stromal cell derived factor 4, [RH, Score=126, Expect=2e-32]} {Mouse: ENSMUSG00000029076, Sdf4, stromal cell derived factor 4, [RH, Score=135, Expect=3e-36]} {Dmel: FBgn0051475, CG31475, [RH, Score=90.9, Expect=7e-20]} {Celegans: WBGene00016965, C56C10.9, [RH, Score=93.2, Expect=4e-21]} {Smed: dd_Smed_v6_9880_0_1, dd_Smed_v6_9880_0_1, [RH, Score=150, Expect=3e-42]} {RNA1509_24066} {RNA1310_21115, RNA1509_24066} {RNA1509_24066, RNA815_17056}
6.	MligTC455_13942	192	4	Mlig455_015587	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.561	SYT14	0.953	-	-	0.953	-	-	-	Mlig455_015587 {REF} {Length: 3362} {Pfam: C2 domain [PF00168.32, score=38.6]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=8e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=108, Expect=3e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=136, Expect=2e-34]} {RNA1509_12596} {RNA1310_670.1, RNA1509_12596} {RNA1509_12596, RNA815_7240.1}
7.	MligTC455_46143	279	5.81	Mlig455_033068	Neo: - Age: logFC(26M/2M)=-0.620		0.952	-	-	0.952	-	-	-	Mlig455_033068 {REF} {Length: 1261} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=53.8]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [Score=174, Expect=4e-53]} {RNA1509_53212} {RNA1310_31009, RNA1509_53212} {RNA1509_53212, RNA815_13367}
8.	MligTC455_50531	176	3.68	Mlig455_017449	Neo: - Age: Up-Down-Up		0.95	-	-	-	-	-	0.950	Mlig455_017449 {REF} {Length: 1259} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885}

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