TomoSeq data search

Data search

Results for MligTC455_50531

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50531	176	3.68	Mlig455_017449	Neo: - Age: Up-Down-Up		Mlig455_017449 {REF} {Length: 1259} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50531

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.664	2.397	0.66639	1.00000
RegionR2	-0.119	2.397	0.86333	1.00000
RegionR3	-0.693	2.397	0.27366	0.81781
RegionR4	-0.164	2.397	0.79629	1.00000
RegionR5	-0.004	2.397	0.99932	1.00000
RegionR6	-0.147	2.397	0.81331	1.00000
RegionR7	-0.393	2.397	0.67112	1.00000
RegionR8	0.856	2.397	0.39604	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.454	2.397	0.17671	0.91886
RegenerationR2	-0.25	2.397	0.64075	0.93154
RegenerationR3	0.403	2.397	0.54094	0.87820
RegenerationR4	0.084	2.397	0.88539	1.00000
RegenerationR5	0.618	2.397	0.23511	0.66891
RegenerationR6	0.386	2.397	0.54212	0.83395
RegenerationBL	-0.366	2.397	0.66764	1.00000
RegenerationTP	-0.56	2.397	0.55997	0.93882

Genes with expression patterns similar to MligTC455_50531

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50531	176	3.68	Mlig455_017449	Neo: - Age: Up-Down-Up		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_017449 {REF} {Length: 1259} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885}
2.	MligTC455_16130	187	3.9	Mlig455_027252	Neo: - Age: -	KDM1B	0.961	-	-	-	0.961	-	-	Mlig455_027252 {REF} {Length: 3669} {Pfam: FAD dependent oxidoreductase [PF12831.9, score=18.0]} {Human: ENSG00000165097, KDM1B, lysine demethylase 1B, [Score=56.6, Expect=8e-09]} {Mouse: ENSMUSG00000038080, Kdm1b, lysine (K)-specific demethylase 1B, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_4269_0_2, dd_Smed_v6_4269_0_2, [Score=51.2, Expect=1e-07]} {RNA1509_34924} {RNA1310_10646} {RNA815_4287}
3.	MligTC455_32891	240	5.01	Mlig455_020398	Neo: - Age: -	ZFYVE19	0.95	-	-	-	-	-	0.950	Mlig455_020398 {REF} {Length: 1343} {Pfam: FYVE zinc finger [PF01363.23, score=26.5]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=88.2, Expect=5e-19]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=123, Expect=3e-31]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_50531

176

3.68

Mlig455_017449

Neo: -

Age: Up-Down-Up

1.000

Mlig455_017449 {REF} {Length: 1259} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885}

MligTC455_16130

187

3.9

Mlig455_027252

Neo: -

Age: -

KDM1B

0.961

Mlig455_027252 {REF} {Length: 3669} {Pfam: FAD dependent oxidoreductase [PF12831.9, score=18.0]} {Human: ENSG00000165097, KDM1B, lysine demethylase 1B, [Score=56.6, Expect=8e-09]} {Mouse: ENSMUSG00000038080, Kdm1b, lysine (K)-specific demethylase 1B, [Score=60.1, Expect=3e-10]} {Smed: dd_Smed_v6_4269_0_2, dd_Smed_v6_4269_0_2, [Score=51.2, Expect=1e-07]} {RNA1509_34924} {RNA1310_10646} {RNA815_4287}

MligTC455_32891

240

5.01

Mlig455_020398

Neo: -

Age: -

ZFYVE19

0.95

0.950

Mlig455_020398 {REF} {Length: 1343} {Pfam: FYVE zinc finger [PF01363.23, score=26.5]} {Human: ENSG00000166140, ZFYVE19, zinc finger FYVE-type containing 19, [RH, Score=88.2, Expect=5e-19]} {Mouse: ENSMUSG00000068580, Zfyve19, zinc finger, FYVE domain containing 19, [RH, Score=123, Expect=3e-31]} {Dmel: FBgn0030694, CG15602, [Score=73.2, Expect=4e-14]} {RNA1509_42277} {RNA1310_26483.2} {RNA815_23338}