Data search
Results for MligTC455_33024
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33024 | 313 | 6.52 | Mlig455_052691 | Neo: - Age: - Region-enriched R4: 1.872/0.03565 |
RSU1 | Mlig455_052691 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; RDD family [PF06271.14, score=37.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [Score=247, Expect=9e-77]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [Score=244, Expect=1e-75]} {Dmel: FBgn0028546, ics, icarus, [Score=224, Expect=4e-68]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [Score=219, Expect=8e-67]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [Score=245, Expect=1e-76]} {RNA1509_22022, RNA1509_43307} {RNA1310_28006.1, RNA1509_43307} {RNA1509_43307, RNA815_12788.1} |
Cumulative graph for MligTC455_33024
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.265 | 3.167 | 0.36751 | 1.00000 | |
| RegionR2 | -0.962 | 3.167 | 0.18077 | 0.53137 | |
| RegionR3 | 0.816 | 3.167 | 0.12166 | 0.60305 | |
| RegionR4 | 1.872 | 3.167 | 0.00488 | 0.03565 | |
| RegionR5 | 0.799 | 3.167 | 0.12021 | 0.34695 | |
| RegionR6 | 0.131 | 3.167 | 0.82733 | 1.00000 | |
| RegionR7 | -1.412 | 3.167 | 0.10707 | 0.62140 | |
| RegionR8 | -2.509 | 3.167 | 0.03414 | 0.36279 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.935 | 3.167 | 0.10741 | 0.82962 | |
| RegenerationR2 | -0.503 | 3.167 | 0.39559 | 0.81217 | |
| RegenerationR3 | -1.156 | 3.167 | 0.06087 | 0.41945 | |
| RegenerationR4 | -0.723 | 3.167 | 0.26214 | 0.70987 | |
| RegenerationR5 | 0.075 | 3.167 | 0.90391 | 1.00000 | |
| RegenerationR6 | 0.288 | 3.167 | 0.64737 | 0.89707 | |
| RegenerationBL | 0.497 | 3.167 | 0.58298 | 0.93468 | |
| RegenerationTP | -0.01 | 3.167 | 0.99568 | 1.00000 |
Genes with expression patterns similar to MligTC455_33024
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33024 | 313 | 6.52 | Mlig455_052691 | Neo: - Age: - Region-enriched R4: 1.872/0.03565 |
RSU1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052691 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; RDD family [PF06271.14, score=37.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [Score=247, Expect=9e-77]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [Score=244, Expect=1e-75]} {Dmel: FBgn0028546, ics, icarus, [Score=224, Expect=4e-68]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [Score=219, Expect=8e-67]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [Score=245, Expect=1e-76]} {RNA1509_22022, RNA1509_43307} {RNA1310_28006.1, RNA1509_43307} {RNA1509_43307, RNA815_12788.1} |
| 2. | MligTC455_34599 | 360 | 7.51 | Mlig455_068284 | Neo: - |
DDX4 | 1.734 | 0.769 | - | - | 0.965 | - | - | Mlig455_068284 {REF} {Length: 3678} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=136.9]; Zinc knuckle [PF00098.25, score=57.3]; Zinc knuckle [PF13696.8, score=28.9]; Helicase conserved C-terminal domain [PF00271.33, score=25.7]; Type III restriction enzyme, res subunit [PF04851.17, score=21.8]; Zinc knuckle [PF13917.8, score=19.9]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=263, Expect=4e-78]; ENSG00000215301, DDX3X, DEAD-box helicase 3 X-linked, [Score=253, Expect=1e-74]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=258, Expect=3e-76]; ENSMUSG00000069045, Ddx3y, DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, [Score=254, Expect=2e-75]; ENSMUSG00000039224, D1Pas1, DNA segment, Chr 1, Pasteur Institute 1, [Score=252, Expect=1e-74]; ENSMUSG00000000787, Ddx3x, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked, [Score=250, Expect=8e-74]} {Dmel: FBgn0263231, bel, belle, [Score=271, Expect=1e-80]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [Score=265, Expect=2e-77]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=284, Expect=4e-85]} {RNA1509_8356} {RNA1310_5204.1} {RNA815_10854} |
| 3. | MligTC455_47044 | 361 | 7.53 | Mlig455_041546 | Neo: - Age: - Region-enriched R5: 1.406/0.01737 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_041546 {REF} {Length: 500} {TRANSSPLICED} {RNA1509_56604} {RNA1310_60152.1} {RNA815_39626} | |
| 4. | MligTC455_21959 | 458 | 9.54 | Mlig455_037394 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.145 Regeneration-enriched BL: 2.145 |
YY1AP1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_037394 {REF} {Length: 6292} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=26.8]; Myb-like DNA-binding domain [PF13921.8, score=21.7]} {Human: ENSG00000163374, YY1AP1, YY1 associated protein 1, [RH, Score=61.6, Expect=1e-08]; ENSG00000116580, GON4L, gon-4 like, [RH, Score=59.7, Expect=5e-08]} {Mouse: ENSMUSG00000054199, Gon4l, gon-4-like (C.elegans), [RH, Score=55.8, Expect=6e-07]} {RNA1509_7143, RNA1509_9438} {RNA1310_696.1, RNA1509_9438} {RNA1509_9438, RNA815_3771} |
| 5. | MligTC455_35270 | 13 | 0.27 | Mlig455_058036 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_058036 {REF} {Length: 896} {NoTransDecoderORF} {RNA1310_129300} |
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