Data search
Results for MligTC455_21959
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21959 | 458 | 9.54 | Mlig455_037394 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.145 Regeneration-enriched BL: 2.145 |
YY1AP1 | Mlig455_037394 {REF} {Length: 6292} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=26.8]; Myb-like DNA-binding domain [PF13921.8, score=21.7]} {Human: ENSG00000163374, YY1AP1, YY1 associated protein 1, [RH, Score=61.6, Expect=1e-08]; ENSG00000116580, GON4L, gon-4 like, [RH, Score=59.7, Expect=5e-08]} {Mouse: ENSMUSG00000054199, Gon4l, gon-4-like (C.elegans), [RH, Score=55.8, Expect=6e-07]} {RNA1509_7143, RNA1509_9438} {RNA1310_696.1, RNA1509_9438} {RNA1509_9438, RNA815_3771} |
Cumulative graph for MligTC455_21959
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.525 | 3.661 | 0.08076 | 0.62095 | |
| RegionR2 | 1.767 | 3.661 | 0.02176 | 0.16204 | |
| RegionR3 | 0.944 | 3.661 | 0.21778 | 0.75881 | |
| RegionR4 | 0.936 | 3.661 | 0.28641 | 0.59577 | |
| RegionR5 | 0.891 | 3.661 | 0.22876 | 0.53468 | |
| RegionR6 | 0.58 | 3.661 | 0.50661 | 1.00000 | |
| RegionR7 | 1.431 | 3.661 | 0.06857 | 0.50382 | |
| RegionR8 | -0.024 | 3.661 | 0.86205 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.666 | 3.661 | 0.99982 | 1.00000 | |
| RegenerationR2 | 0.085 | 3.661 | 0.83910 | 1.00000 | |
| RegenerationR3 | 0.938 | 3.661 | 0.05851 | 0.41430 | |
| RegenerationR4 | 0.578 | 3.661 | 0.26227 | 0.71003 | |
| RegenerationR5 | 1.148 | 3.661 | 0.00785 | 0.16090 | |
| RegenerationR6 | 1.637 | 3.661 | 0.00121 | 0.03846 | |
| RegenerationBL | 2.145 | 3.661 | 0.00019 | 0.00698 | Specific for BL: 2.145 |
| RegenerationTP | 0.756 | 3.661 | 0.26242 | 0.71019 |
Genes with expression patterns similar to MligTC455_21959
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21959 | 458 | 9.54 | Mlig455_037394 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.145 Regeneration-enriched BL: 2.145 |
YY1AP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_037394 {REF} {Length: 6292} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=26.8]; Myb-like DNA-binding domain [PF13921.8, score=21.7]} {Human: ENSG00000163374, YY1AP1, YY1 associated protein 1, [RH, Score=61.6, Expect=1e-08]; ENSG00000116580, GON4L, gon-4 like, [RH, Score=59.7, Expect=5e-08]} {Mouse: ENSMUSG00000054199, Gon4l, gon-4-like (C.elegans), [RH, Score=55.8, Expect=6e-07]} {RNA1509_7143, RNA1509_9438} {RNA1310_696.1, RNA1509_9438} {RNA1509_9438, RNA815_3771} |
| 2. | MligTC455_47256 | 1264 | 26.33 | Mlig455_035294 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.234 Region-enriched R4: 1.028/0.00756 |
FRG1 | 1.783 | - | - | - | 0.814 | - | 0.969 | Mlig455_035294 {REF} {Length: 1519} {TRANSSPLICED} {Pfam: FRG1-like domain [PF06229.14, score=186.6]; FAM32A [PF08555.12, score=20.3]} {Human: ENSG00000275145, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283630, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000283153, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]; ENSG00000109536, FRG1, FSHD region gene 1, [RH, Score=208, Expect=2e-66]} {Mouse: ENSMUSG00000031590, Frg1, FSHD region gene 1, [RH, Score=209, Expect=7e-67]} {Dmel: FBgn0036964, FRG1, FSHD region gene 1, [RH, Score=168, Expect=7e-51]} {Celegans: WBGene00014177, frg-1, Protein FRG1 homolog, [RH, Score=129, Expect=8e-36]} {Smed: dd_Smed_v6_3094_0_1, dd_Smed_v6_3094_0_1, [RH, Score=206, Expect=8e-66]} {RNA1509_13353, RNA1509_49322} {RNA1310_22014.1, RNA1509_13353, RNA1509_49322} {RNA1509_13353, RNA1509_49322, RNA815_8956} |
| 3. | MligTC455_45197 | 938 | 19.54 | Mlig455_052429 | Neo: - Age: - |
ANKRD44 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_052429 {REF} {Length: 3376} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=125.4]; Ankyrin repeats (many copies) [PF13637.8, score=101.6]; Ankyrin repeats (many copies) [PF13857.8, score=90.3]; Ankyrin repeat [PF13606.8, score=72.4]; Ankyrin repeat [PF00023.32, score=54.1]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=110, Expect=1e-24]; ENSG00000119509, INVS, inversin, [Score=110, Expect=5e-24]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=107, Expect=5e-23]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=107, Expect=2e-23]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=106, Expect=4e-23]} {Dmel: FBgn0260487, CG42534, [Score=109, Expect=4e-24]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [Score=95.5, Expect=5e-20]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [Score=112, Expect=4e-25]} {RNA1509_13535, RNA1509_8541} {RNA1310_5307.1, RNA1509_13535, RNA1509_8541} {RNA1509_13535, RNA1509_8541, RNA815_942} |
| 4. | MligTC455_23025 | 1509 | 31.43 | Mlig455_000988 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.920 Region-enriched R4: 1.884/0.00009 |
DHRS4 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_000988 {REF} {Length: 1155} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=216.8]; short chain dehydrogenase [PF00106.27, score=169.8]; KR domain [PF08659.12, score=38.4]} {Human: ENSG00000284807, DHRS4, dehydrogenase/reductase 4, [RH, Score=260, Expect=7e-87]; ENSG00000157326, DHRS4, dehydrogenase/reductase 4, [RH, Score=260, Expect=7e-87]} {Mouse: ENSMUSG00000022210, Dhrs4, dehydrogenase/reductase (SDR family) member 4, [RH, Score=261, Expect=2e-87]} {Dmel: FBgn0035588, CG10672, [RH, Score=276, Expect=9e-93]} {Celegans: WBGene00000976, dhs-13, DeHydrogenases, Short chain, [RH, Score=254, Expect=5e-85]} {Smed: dd_Smed_v6_6646_0_1, dd_Smed_v6_6646_0_1, [RH, Score=261, Expect=4e-88]} {RNA1509_20367} {RNA1310_32758.1, RNA1509_20367} {RNA1509_20367, RNA815_14440.1} |
| 5. | MligTC455_51788 | 205 | 4.26 | Mlig455_063194 | Neo: - Age: logFC(26M/2M)=-0.513 |
SPEG | 0.958 | - | - | 0.958 | - | - | - | Mlig455_063194 {REF} {Length: 1354} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=104.4]; Immunoglobulin domain [PF13927.8, score=71.3]; Immunoglobulin domain [PF13895.8, score=44.3]; Immunoglobulin domain [PF00047.27, score=41.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=21.8]} {Human: ENSG00000072195, SPEG, SPEG complex locus, [Score=88.2, Expect=2e-18]} {Mouse: ENSMUSG00000026207, Speg, SPEG complex locus, [Score=84.0, Expect=3e-17]; ENSMUSG00000022836, Mylk, myosin, light polypeptide kinase, [Score=82.8, Expect=9e-17]; ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=80.1, Expect=7e-16]} {Dmel: FBgn0052311, zormin, [Score=84.7, Expect=1e-17]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=80.5, Expect=3e-16]} {Smed: dd_Smed_v6_3381_0_1, dd_Smed_v6_3381_0_1, [Score=97.4, Expect=5e-22]} {RNA1509_46253} {RNA1310_14115} {RNA815_27903} |
| 6. | MligTC455_50504 | 987 | 20.56 | Mlig455_040540, Mlig455_062095 | Neo: - Age: - |
KIAA0319L | 0.956 | - | - | 0.956 | - | - | - | Mlig455_040540 {REF} {Length: 4585} {TRANSSPLICED} {Pfam: PKD domain [PF18911.2, score=59.7]; PKD domain [PF00801.22, score=52.4]; Y_Y_Y domain [PF07495.15, score=37.1]; REJ domain [PF02010.17, score=36.5]; Domain of unknown function (DUF4625) [PF15418.8, score=22.1]; Secretion system C-terminal sorting domain [PF18962.2, score=21.9]} {Human: ENSG00000142687, KIAA0319L, KIAA0319 like, [RH, Score=420, Expect=4e-129]; ENSG00000137261, KIAA0319, KIAA0319, [RH, Score=399, Expect=4e-121]} {Mouse: ENSMUSG00000028830, AU040320, expressed sequence AU040320, [RH, Score=431, Expect=3e-133]} {Dmel: FBgn0035833, CG7565, [RH, Score=383, Expect=1e-115]} {Smed: dd_Smed_v6_5457_0_1, dd_Smed_v6_5457_0_1, [RH, Score=366, Expect=1e-111]} {RNA1509_31013, RNA1509_33220, RNA1509_44959, RNA1509_5618} {RNA1310_1550.1, RNA1509_31013, RNA1509_33220, RNA1509_44959, RNA1509_5618} {RNA1509_31013, RNA1509_33220, RNA1509_44959, RNA1509_5618, RNA815_5335} Mlig455_062095 {REF} {Length: 4787} {Pfam: PKD domain [PF18911.2, score=59.8]; PKD domain [PF00801.22, score=51.5]; REJ domain [PF02010.17, score=38.4]; Y_Y_Y domain [PF07495.15, score=34.1]; Secretion system C-terminal sorting domain [PF18962.2, score=20.6]; Domain of unknown function (DUF4625) [PF15418.8, score=20.0]} {Human: ENSG00000142687, KIAA0319L, KIAA0319 like, [RH, Score=425, Expect=7e-131]} {Mouse: ENSMUSG00000028830, AU040320, expressed sequence AU040320, [RH, Score=435, Expect=9e-135]} {Dmel: FBgn0035833, CG7565, [RH, Score=386, Expect=2e-116]} {Smed: dd_Smed_v6_5457_0_1, dd_Smed_v6_5457_0_1, [RH, Score=373, Expect=5e-114]} {RNA1509_44959, RNA1509_53169} {RNA1310_1550.1, RNA1509_53169} {RNA1509_53169, RNA815_5335} |
| 7. | MligTC455_33024 | 313 | 6.52 | Mlig455_052691 | Neo: - Age: - Region-enriched R4: 1.872/0.03565 |
RSU1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_052691 {REF} {Length: 2925} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; RDD family [PF06271.14, score=37.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [Score=247, Expect=9e-77]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [Score=244, Expect=1e-75]} {Dmel: FBgn0028546, ics, icarus, [Score=224, Expect=4e-68]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [Score=219, Expect=8e-67]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [Score=245, Expect=1e-76]} {RNA1509_22022, RNA1509_43307} {RNA1310_28006.1, RNA1509_43307} {RNA1509_43307, RNA815_12788.1} |
| 8. | MligTC455_21431 | 1618 | 33.71 | Mlig455_006938 | Neo: Int S/G2/M Age: - |
HYOU1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_006938 {REF} {Length: 5721} {Pfam: Hsp70 protein [PF00012.22, score=302.4]} {Human: ENSG00000280682, HYOU1, hypoxia up-regulated 1, [RH, Score=686, Expect=0.0]; ENSG00000149428, HYOU1, hypoxia up-regulated 1, [RH, Score=686, Expect=0.0]} {Mouse: ENSMUSG00000032115, Hyou1, hypoxia up-regulated 1, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0023529, CG2918, [RH, Score=638, Expect=0.0]} {Celegans: WBGene00020781, T24H7.2, [RH, Score=440, Expect=3e-139]} {Smed: dd_Smed_v6_2324_0_1, dd_Smed_v6_2324_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_2039} {RNA1310_2884} {RNA815_385} |
| 9. | MligTC455_45701 | 1910 | 39.79 | Mlig455_005201 | Neo: - |
NFU1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_005201 {REF} {Length: 1048} {TRANSSPLICED} {Pfam: Scaffold protein Nfu/NifU N terminal [PF08712.13, score=105.5]; NifU-like domain [PF01106.19, score=93.5]} {Human: ENSG00000169599, NFU1, NFU1 iron-sulfur cluster scaffold, [RH, Score=248, Expect=9e-83]} {Mouse: ENSMUSG00000029993, Nfu1, NFU1 iron-sulfur cluster scaffold, [RH, Score=251, Expect=8e-84]} {Dmel: FBgn0052857, CG32857, [RH, Score=265, Expect=1e-88]} {Celegans: WBGene00003064, lpd-8, LiPid Depleted, [RH, Score=209, Expect=8e-68]} {RNA1509_6976} {RNA1310_31621, RNA1509_6976} {RNA1509_6976, RNA815_15289} |
Berezikov Lab - 2020-2021 © ERIBA