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Results for MligTC455_33042

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33042 366 7.62 Mlig455_041855

Neo: -

Age: -

 RAB3C Mlig455_041855 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=6e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=2e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=334, Expect=1e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=331, Expect=1e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=331, Expect=1e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=327, Expect=7e-115]} {Dmel: FBgn0005586, Rab3, [RH, Score=346, Expect=1e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=342, Expect=4e-121]} {RNA1509_33673} {RNA1310_14402} {RNA815_5665.1}

Cumulative graph for MligTC455_33042

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.539 3.342 0.43032 1.00000
RegionR2 0.275 3.342 0.71157 1.00000
RegionR3 0.732 3.342 0.19851 0.73728
RegionR4 -0.101 3.342 0.88764 1.00000
RegionR5 0.673 3.342 0.18943 0.47249
RegionR6 0.38 3.342 0.52400 1.00000
RegionR7 -0.97 3.342 0.29583 0.93088
RegionR8 0.55 3.342 0.51437 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.432 3.342 0.59741 1.00000
RegenerationR2 1.339 3.342 0.02216 0.24486
RegenerationR3 0.53 3.342 0.40801 0.80721
RegenerationR4 1.593 3.342 0.01609 0.19883
RegenerationR5 0.893 3.342 0.11803 0.51605
RegenerationR6 1.035 3.342 0.11062 0.41028
RegenerationBL 1.448 3.342 0.05513 0.27180
RegenerationTP 1.791 3.342 0.02396 0.26290


Genes with expression patterns similar to MligTC455_33042

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33042 366 7.62 Mlig455_041855

Neo: -

Age: -

 RAB3C 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_041855 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=6e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=2e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=334, Expect=1e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=331, Expect=1e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=331, Expect=1e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=327, Expect=7e-115]} {Dmel: FBgn0005586, Rab3, [RH, Score=346, Expect=1e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=342, Expect=4e-121]} {RNA1509_33673} {RNA1310_14402} {RNA815_5665.1}
2. MligTC455_39789 7445 155.1 Mlig455_028826, Mlig455_036262

Neo: -

Age: logFC(26M/2M)=-0.843

 GLRA2, RPL35 0.963 - - - 0.963 - -

Mlig455_028826 {REF} {Length: 1888} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=140.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=101.0]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=263, Expect=1e-81]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=261, Expect=3e-81]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=259, Expect=4e-80]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=256, Expect=3e-79]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=266, Expect=5e-83]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=262, Expect=1e-81]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=258, Expect=1e-79]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=256, Expect=5e-79]} {Dmel: FBgn0030707, CG8916, [Score=236, Expect=3e-71]} {Celegans: WBGene00001591, glc-1, Glutamate-gated chloride channel alpha, [Score=238, Expect=1e-72]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=275, Expect=5e-87]} {RNA1310_64518}

Mlig455_036262 {REF} {Length: 507} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=140, Expect=6e-44]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=141, Expect=2e-44]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=141, Expect=2e-44]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=138, Expect=3e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=5e-30]} {RNA1509_9000} {RNA1310_68306.2} {RNA815_35452}
3. MligTC455_28660 16005 333.43 Mlig455_017132

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.329

 RPL37A 0.96 - - - 0.960 - - Mlig455_017132 {REF} {Length: 421} {TRANSSPLICED} {Pfam: Ribosomal L37ae protein family [PF01780.21, score=134.9]; C1 domain [PF03107.18, score=19.3]} {Human: ENSG00000197756, RPL37A, ribosomal protein L37a, [RH, Score=139, Expect=3e-44]} {Mouse: ENSMUSG00000046330, Rpl37a, ribosomal protein L37a, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0261608, RpL37A, Ribosomal protein L37A, [RH, Score=140, Expect=7e-45]} {Celegans: WBGene00004456, rpl-43, 60S ribosomal protein L37a, [RH, Score=132, Expect=7e-42]} {Smed: dd_Smed_v6_140_0_1, dd_Smed_v6_140_0_1, [RH, Score=116, Expect=7e-36]} {RNA1509_37674, RNA1509_8174} {RNA1310_53200.1, RNA1509_37674, RNA1509_8174} {RNA1509_37674, RNA1509_8174, RNA815_27192}
4. MligTC455_39790 22547 469.74 Mlig455_054533, Mlig455_055385, Mlig455_055459

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.315

 RPL35 0.955 - - - 0.955 - -

Mlig455_054533 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=144, Expect=2e-45]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=145, Expect=1e-45]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=145, Expect=1e-45]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=137, Expect=7e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=6e-30]} {RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424, RNA1509_9000} {RNA1310_68306.2, RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424} {RNA1509_2855, RNA1509_41554, RNA1509_5741, RNA1509_7424, RNA815_35452}

Mlig455_055385 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=140, Expect=6e-44]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=141, Expect=2e-44]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=141, Expect=2e-44]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=138, Expect=3e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=5e-30]} {RNA1509_1154, RNA1509_9000} {RNA1310_68306.2, RNA1509_1154, RNA1509_9000} {RNA1509_1154, RNA1509_9000, RNA815_35452}

Mlig455_055459 {REF} {Length: 508} {TRANSSPLICED} {Pfam: Ribosomal L29 protein [PF00831.25, score=63.9]} {Human: ENSG00000136942, RPL35, ribosomal protein L35, [RH, Score=144, Expect=2e-45]} {Mouse: ENSMUSG00000078193, Gm2000, predicted gene 2000, [RH, Score=145, Expect=1e-45]; ENSMUSG00000062997, Rpl35, ribosomal protein L35, [RH, Score=145, Expect=1e-45]} {Dmel: FBgn0029785, RpL35, Ribosomal protein L35, [RH, Score=137, Expect=7e-43]} {Celegans: WBGene00004449, rpl-35, 60S ribosomal protein L35, [RH, Score=120, Expect=3e-36]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [RH, Score=104, Expect=6e-30]} {RNA1509_14871, RNA1509_9000} {RNA1310_68306.2, RNA1509_14871} {RNA1509_14871, RNA815_35452}
5. MligTC455_29165 10381 216.27 Mlig455_000185

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.368

 RPS20 0.954 - - - 0.954 - - Mlig455_000185 {REF} {Length: 549} {TRANSSPLICED} {Pfam: Ribosomal protein S10p/S20e [PF00338.24, score=93.0]} {Human: ENSG00000008988, RPS20, ribosomal protein S20, [RH, Score=177, Expect=2e-58]} {Mouse: ENSMUSG00000028234, Rps20, ribosomal protein S20, [RH, Score=177, Expect=1e-58]} {Dmel: FBgn0019936, RpS20, Ribosomal protein S20, [RH, Score=172, Expect=4e-57]} {Celegans: WBGene00004489, rps-20, Ribosomal Protein, Small subunit, [RH, Score=160, Expect=4e-52]} {Smed: dd_Smed_v6_123_0_1, dd_Smed_v6_123_0_1, [RH, Score=132, Expect=2e-41]} {RNA1509_1951, RNA1509_1973, RNA1509_3409, RNA1509_8573} {RNA1310_56038.1, RNA1509_1951, RNA1509_1973, RNA1509_3409, RNA1509_8573} {RNA1509_1951, RNA1509_1973, RNA1509_3409, RNA1509_8573, RNA815_27133}
6. MligTC455_48316 736 15.33 Mlig455_024236

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.170

 0.954 - - - 0.954 - - Mlig455_024236 {REF} {Length: 1366} {Pfam: NADH-ubiquinone reductase complex 1 MLRQ subunit [PF06522.13, score=19.0]} {RNA1509_23312, RNA1509_24608, RNA1509_52164} {RNA1310_29405, RNA1509_23312, RNA1509_24608, RNA1509_52164} {RNA1509_23312, RNA1509_24608, RNA1509_52164, RNA815_17291.1}
7. MligTC455_09959 2412 50.25 Mlig455_043894

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.095/0.00000

Regeneration-upregulated BL: 1.261

Regeneration-enriched BL: 1.261

 POLDIP3 0.95 - - - 0.950 - - Mlig455_043894 {REF} {Length: 1920} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=41.8]} {Human: ENSG00000100227, POLDIP3, DNA polymerase delta interacting protein 3, [RH, Score=93.2, Expect=1e-20]} {Mouse: ENSMUSG00000041815, Poldip3, polymerase (DNA-directed), delta interacting protein 3, [RH, Score=96.7, Expect=4e-22]} {Dmel: FBgn0030959, CG6961, [RH, Score=74.3, Expect=2e-14]} {Smed: dd_Smed_v6_6532_0_1, dd_Smed_v6_6532_0_1, [RH, Score=76.3, Expect=2e-15]} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1310_21831.1, RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713, RNA815_6046}

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