TomoSeq data search

Data search

Results for MligTC455_33122

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33122

65

1.35

Mlig455_027786, Mlig455_063451

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.648

SYNPR, SYP

Mlig455_027786 {REF} {Length: 3347} {Pfam: Membrane-associating domain [PF01284.25, score=105.6]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=163, Expect=2e-48]; ENSG00000163630, SYNPR, synaptoporin, [RH, Score=162, Expect=2e-48]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=162, Expect=6e-48]; ENSMUSG00000056296, Synpr, synaptoporin, [RH, Score=160, Expect=7e-48]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [RH, Score=80.1, Expect=5e-18]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [RH, Score=178, Expect=1e-55]} {RNA1509_20189, RNA1509_46137, RNA1509_55192} {RNA1310_9076, RNA1509_20189, RNA1509_46137, RNA1509_55192} {RNA1509_20189, RNA1509_46137, RNA1509_55192, RNA815_6504}

Mlig455_063451 {REF} {Length: 1444} {Pfam: Membrane-associating domain [PF01284.25, score=65.8]} {Human: ENSG00000163630, SYNPR, synaptoporin, [Score=97.1, Expect=1e-24]; ENSG00000102003, SYP, synaptophysin, [Score=94.7, Expect=1e-23]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=93.2, Expect=2e-24]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [Score=63.2, Expect=1e-12]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [Score=94.4, Expect=2e-24]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504}

Cumulative graph for MligTC455_33122

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.727	1.471	0.99986	1.00000
RegionR2	0.8	1.471	0.72848	1.00000
RegionR3	-0.57	1.471	0.94639	1.00000
RegionR4	1.553	1.471	0.29457	0.60612
RegionR5	0.894	1.471	0.49594	0.85936
RegionR6	-0.353	1.471	0.87381	1.00000
RegionR7	-2.787	1.471	0.99989	1.00000
RegionR8	3.19	1.471	0.19142	0.78298

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.159	1.471	0.99986	1.00000
RegenerationR2	0.89	1.471	0.56649	0.90107
RegenerationR3	1.712	1.471	0.38812	0.79473
RegenerationR4	0.56	1.471	0.73477	0.96583
RegenerationR5	1.3	1.471	0.46332	0.83861
RegenerationR6	1.487	1.471	0.54712	0.83733
RegenerationBL	-0.473	1.471	0.88383	1.00000
RegenerationTP	1.759	1.471	0.49115	0.89638

Genes with expression patterns similar to MligTC455_33122

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33122	65	1.35	Mlig455_027786, Mlig455_063451	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.648	SYNPR, SYP	4	-	-	1.000	1.000	1.000	1.000	Mlig455_027786 {REF} {Length: 3347} {Pfam: Membrane-associating domain [PF01284.25, score=105.6]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=163, Expect=2e-48]; ENSG00000163630, SYNPR, synaptoporin, [RH, Score=162, Expect=2e-48]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=162, Expect=6e-48]; ENSMUSG00000056296, Synpr, synaptoporin, [RH, Score=160, Expect=7e-48]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [RH, Score=80.1, Expect=5e-18]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [RH, Score=178, Expect=1e-55]} {RNA1509_20189, RNA1509_46137, RNA1509_55192} {RNA1310_9076, RNA1509_20189, RNA1509_46137, RNA1509_55192} {RNA1509_20189, RNA1509_46137, RNA1509_55192, RNA815_6504} Mlig455_063451 {REF} {Length: 1444} {Pfam: Membrane-associating domain [PF01284.25, score=65.8]} {Human: ENSG00000163630, SYNPR, synaptoporin, [Score=97.1, Expect=1e-24]; ENSG00000102003, SYP, synaptophysin, [Score=94.7, Expect=1e-23]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=93.2, Expect=2e-24]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [Score=63.2, Expect=1e-12]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [Score=94.4, Expect=2e-24]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504}
2.	MligTC455_33123	64	1.33	Mlig455_063455	Neo: - Age: -	SYP	2.794	-	-	0.996	-	0.906	0.892	Mlig455_063455 {REF} {Length: 2098} {Pfam: Membrane-associating domain [PF01284.25, score=30.0]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=74.7, Expect=5e-17]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [Score=72.8, Expect=7e-16]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [Score=87.4, Expect=3e-22]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504}
3.	MligTC455_53362	25	0.51	Mlig455_042367	Neo: - Age: -		0.985	-	-	-	0.985	-	-	Mlig455_042367 {REF} {Length: 186} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
4.	MligTC455_13333	116	2.42	Mlig455_017077	Neo: - Age: -		0.971	-	-	0.971	-	-	-	Mlig455_017077 {REF} {Length: 2070} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=19.5]} {RNA1509_11472} {RNA1310_17969} {RNA815_7860}
5.	MligTC455_28745	165	3.43	Mlig455_011834	Neo: - Age: Up-Down-Up	ITPR1	0.97	-	-	0.970	-	-	-	Mlig455_011834 {REF} {Length: 9842} {Pfam: RIH domain [PF01365.23, score=97.3]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.7]; RyR and IP3R Homology associated [PF08454.13, score=66.6]; MIR domain [PF02815.21, score=57.6]; Ion transport protein [PF00520.33, score=21.7]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=226, Expect=3e-58]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=225, Expect=6e-58]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=220, Expect=2e-56]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=229, Expect=3e-59]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=154, Expect=9e-37]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=142, Expect=2e-33]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3006, Expect=0.0]} {RNA1509_2749, RNA1509_40391} {RNA1310_434.2, RNA1509_40391} {RNA1509_40391, RNA815_1122}
6.	MligTC455_28744	162	3.37	Mlig455_011019	Neo: - Age: Down-Up-Down	ITPR1	0.968	-	-	0.968	-	-	-	Mlig455_011019 {REF} {Length: 3051} {Pfam: Ion transport protein [PF00520.33, score=20.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=114, Expect=7e-26]; ENSMUSG00000030592, Ryr1, ryanodine receptor 1, skeletal muscle, [Score=109, Expect=2e-24]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=97.4, Expect=9e-21]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=447, Expect=6e-150]} {RNA1509_25537} {RNA1310_434.1} {RNA815_10022}
7.	MligTC455_25181	2947	61.4	Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883	Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511		0.967	-	-	-	-	0.967	-	Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223}
8.	MligTC455_43878	233	4.86	Mlig455_070393	Neo: - Age: Down-Up-Up	SELENOT	0.959	-	-	0.959	-	-	-	Mlig455_070393 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Rdx family [PF10262.11, score=36.8]} {Human: ENSG00000198843, SELENOT, selenoprotein T, [Score=90.1, Expect=8e-24]} {Mouse: ENSMUSG00000075700, Selenot, selenoprotein T, [Score=90.1, Expect=7e-24]} {Dmel: FBgn0031670, CG3887, [Score=94.0, Expect=2e-25]} {Celegans: WBGene00007955, selt-1.1, Putative selT-like protein C35C5.3, [Score=83.2, Expect=4e-21]} {Smed: dd_Smed_v6_969_0_1, dd_Smed_v6_969_0_1, [RH, Score=104, Expect=2e-30]} {RNA1509_3391, RNA1509_4381} {RNA1310_55836.1, RNA1509_3391, RNA1509_4381} {RNA1509_3391, RNA1509_4381, RNA815_9707.1}
9.	MligTC455_29148	351	7.31	Mlig455_006975	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.502		0.958	-	-	-	-	0.958	-	Mlig455_006975 {REF} {Length: 2167} {RNA1310_27903} {RNA815_7705.1}
10.	MligTC455_28080	127	2.65	Mlig455_004779	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.599		0.955	-	-	0.955	-	-	-	Mlig455_004779 {REF} {Length: 6259} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
11.	MligTC455_12603	37	0.76	Mlig455_012565	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_012565 {REF} {Length: 1526} {NoTransDecoderORF} {RNA1509_7456} {RNA1310_20308} {RNA815_9582.1}
12.	MligTC455_37212	42	0.88	Mlig455_035381	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	-	0.953	Mlig455_035381 {REF} {Length: 2362} {RNA1509_31894} {RNA1310_21244} {RNA815_11232.1}
13.	MligTC455_32379	46	0.96	Mlig455_012393	Neo: - Age: Up-Down-Up	ROS1	0.95	-	-	-	0.950	-	-	Mlig455_012393 {REF} {Length: 7814} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=278.1]; Protein kinase domain [PF00069.27, score=126.0]; Fibronectin type III domain [PF00041.23, score=34.5]} {Human: ENSG00000047936, ROS1, ROS proto-oncogene 1, receptor tyrosine kinase, [RH, Score=293, Expect=9e-79]; ENSG00000171094, ALK, ALK receptor tyrosine kinase, [RH, Score=292, Expect=3e-85]} {Mouse: ENSMUSG00000019893, Ros1, Ros1 proto-oncogene, [RH, Score=293, Expect=6e-79]; ENSMUSG00000055471, Alk, anaplastic lymphoma kinase, [RH, Score=290, Expect=1e-78]; ENSMUSG00000027297, Ltk, leukocyte tyrosine kinase, [RH, Score=284, Expect=2e-83]} {Dmel: FBgn0003366, sev, sevenless, [RH, Score=304, Expect=2e-82]} {Celegans: WBGene00004740, scd-2, ALK tyrosine kinase receptor homolog scd-2, [RH, Score=222, Expect=7e-58]} {Smed: dd_Smed_v6_8973_0_1, dd_Smed_v6_8973_0_1, [RH, Score=234, Expect=2e-61]} {RNA1509_22677} {RNA1310_2018.1, RNA1509_22677} {RNA1509_22677, RNA815_12907}

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