Data search
Results for MligTC455_33124
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33124 | 1010 | 21.03 | Mlig455_063486 | Neo: - Age: Down-Up-Down |
SYP | Mlig455_063486 {REF} {Length: 2775} {Pfam: Membrane-associating domain [PF01284.25, score=105.1]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=162, Expect=6e-48]; ENSG00000163630, SYNPR, synaptoporin, [RH, Score=160, Expect=1e-47]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=160, Expect=2e-47]; ENSMUSG00000056296, Synpr, synaptoporin, [RH, Score=158, Expect=5e-47]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [RH, Score=79.3, Expect=1e-17]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504} |
Cumulative graph for MligTC455_33124
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.273 | 4.451 | 0.12618 | 0.72113 | |
| RegionR2 | 0.502 | 4.451 | 0.22346 | 0.59354 | |
| RegionR3 | -0.181 | 4.451 | 0.62244 | 1.00000 | |
| RegionR4 | -0.801 | 4.451 | 0.04807 | 0.18775 | |
| RegionR5 | 0.368 | 4.451 | 0.25788 | 0.57739 | |
| RegionR6 | 0.357 | 4.451 | 0.31376 | 0.90261 | |
| RegionR7 | 0.934 | 4.451 | 0.01283 | 0.20023 | |
| RegionR8 | 0.094 | 4.451 | 0.84817 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.595 | 4.451 | 0.29300 | 0.99089 | |
| RegenerationR2 | -0.504 | 4.451 | 0.20835 | 0.65598 | |
| RegenerationR3 | -0.173 | 4.451 | 0.69406 | 0.94572 | |
| RegenerationR4 | -0.324 | 4.451 | 0.46323 | 0.84904 | |
| RegenerationR5 | -0.537 | 4.451 | 0.17834 | 0.60690 | |
| RegenerationR6 | -0.709 | 4.451 | 0.10449 | 0.40055 | |
| RegenerationBL | -0.749 | 4.451 | 0.10249 | 0.37738 | |
| RegenerationTP | -0.063 | 4.451 | 0.88913 | 1.00000 |
Genes with expression patterns similar to MligTC455_33124
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33124 | 1010 | 21.03 | Mlig455_063486 | Neo: - Age: Down-Up-Down |
SYP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063486 {REF} {Length: 2775} {Pfam: Membrane-associating domain [PF01284.25, score=105.1]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=162, Expect=6e-48]; ENSG00000163630, SYNPR, synaptoporin, [RH, Score=160, Expect=1e-47]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=160, Expect=2e-47]; ENSMUSG00000056296, Synpr, synaptoporin, [RH, Score=158, Expect=5e-47]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [RH, Score=79.3, Expect=1e-17]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504} |
| 2. | MligTC455_53314 | 484 | 10.08 | Mlig455_053621 | Neo: - Age: - |
STK32B | 1.745 | - | - | - | - | 0.794 | 0.951 | Mlig455_053621 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=187.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=103.0]; Kinase-like [PF14531.8, score=34.9]; Fungal protein kinase [PF17667.3, score=22.2]} {Human: ENSG00000152953, STK32B, serine/threonine kinase 32B, [RH, Score=415, Expect=2e-142]} {Mouse: ENSMUSG00000029123, Stk32b, serine/threonine kinase 32B, [RH, Score=427, Expect=3e-147]; ENSMUSG00000039954, Stk32a, serine/threonine kinase 32A, [RH, Score=422, Expect=2e-145]} {Dmel: FBgn0052944, CG32944, [RH, Score=376, Expect=8e-127]} {Celegans: WBGene00010838, M03C11.1, [RH, Score=335, Expect=1e-111]} {Smed: dd_Smed_v6_6683_0_1, dd_Smed_v6_6683_0_1, [Score=368, Expect=8e-125]} {RNA1509_33504} {RNA1310_15182, RNA1509_33504} {RNA1509_33504, RNA815_6867} |
| 3. | MligTC455_26482 | 390 | 8.12 | Mlig455_023827 | Neo: - Age: Up-Down-Up |
CCDC88A | 0.96 | - | - | - | - | - | 0.960 | Mlig455_023827 {REF} {Length: 4847} {Pfam: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=20.7]} {Human: ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000032740, Ccdc88a, coiled coil domain containing 88A, [Score=73.9, Expect=9e-13]} {Dmel: FBgn0283724, Girdin, [Score=78.6, Expect=2e-14]} {Smed: dd_Smed_v6_5291_0_2, dd_Smed_v6_5291_0_2, [Score=82.8, Expect=6e-16]} {RNA1509_18704} {RNA1310_2232.1} {RNA815_6605} |
| 4. | MligTC455_48017 | 2073 | 43.19 | Mlig455_030013 | Neo: - Age: - |
OTC | 0.955 | - | - | - | 0.955 | - | - | Mlig455_030013 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain [PF00185.26, score=163.0]; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain [PF02729.23, score=147.3]} {Human: ENSG00000036473, OTC, ornithine carbamoyltransferase, [RH, Score=362, Expect=7e-124]} {Mouse: ENSMUSG00000031173, Otc, ornithine transcarbamylase, [RH, Score=368, Expect=2e-126]} {Dmel: FBgn0003189, r, rudimentary, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004259, pyr-1, CAD protein Glutamine-dependent carbamoyl-phosphate synthase Aspartate carbamoyltransferase Dihydroorotase, [Score=60.1, Expect=2e-09]} {Smed: dd_Smed_v6_3906_0_1, dd_Smed_v6_3906_0_1, [RH, Score=405, Expect=1e-141]} {RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1310_20910, RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1509_10847, RNA1509_36418, RNA1509_38947, RNA815_9039} |
| 5. | MligTC455_51381 | 347 | 7.23 | Mlig455_024564 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_024564 {REF} {Length: 1946} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [RH, Score=73.2, Expect=7e-15]} {RNA1509_27432} {RNA1310_25177} {RNA815_20912} |
Berezikov Lab - 2020-2021 © ERIBA