TomoSeq data search

Data search

Results for MligTC455_48017

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48017

2073

43.19

Mlig455_030013

Neo: -

Age: -

OTC

Mlig455_030013 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain [PF00185.26, score=163.0]; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain [PF02729.23, score=147.3]} {Human: ENSG00000036473, OTC, ornithine carbamoyltransferase, [RH, Score=362, Expect=7e-124]} {Mouse: ENSMUSG00000031173, Otc, ornithine transcarbamylase, [RH, Score=368, Expect=2e-126]} {Dmel: FBgn0003189, r, rudimentary, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004259, pyr-1, CAD protein Glutamine-dependent carbamoyl-phosphate synthase Aspartate carbamoyltransferase Dihydroorotase, [Score=60.1, Expect=2e-09]} {Smed: dd_Smed_v6_3906_0_1, dd_Smed_v6_3906_0_1, [RH, Score=405, Expect=1e-141]} {RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1310_20910, RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1509_10847, RNA1509_36418, RNA1509_38947, RNA815_9039}

Cumulative graph for MligTC455_48017

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.19	5.504	0.76870	1.00000
RegionR2	-0.108	5.504	0.75376	1.00000
RegionR3	0.122	5.504	0.67043	1.00000
RegionR4	-1.501	5.504	0.00007	0.00115
RegionR5	-0.57	5.504	0.05401	0.19816
RegionR6	0.44	5.504	0.12257	0.63806
RegionR7	0.774	5.504	0.01373	0.20841
RegionR8	1.034	5.504	0.00447	0.11748

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.009	5.504	0.29640	0.99329
RegenerationR2	-0.525	5.504	0.13676	0.56448
RegenerationR3	-0.276	5.504	0.44752	0.83064
RegenerationR4	0.485	5.504	0.21657	0.66370
RegenerationR5	0.324	5.504	0.36821	0.77887
RegenerationR6	-0.415	5.504	0.25380	0.60372
RegenerationBL	-0.856	5.504	0.01794	0.14352
RegenerationTP	-0.31	5.504	0.39654	0.82689

Genes with expression patterns similar to MligTC455_48017

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48017	2073	43.19	Mlig455_030013	Neo: - Age: -	OTC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_030013 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain [PF00185.26, score=163.0]; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain [PF02729.23, score=147.3]} {Human: ENSG00000036473, OTC, ornithine carbamoyltransferase, [RH, Score=362, Expect=7e-124]} {Mouse: ENSMUSG00000031173, Otc, ornithine transcarbamylase, [RH, Score=368, Expect=2e-126]} {Dmel: FBgn0003189, r, rudimentary, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004259, pyr-1, CAD protein Glutamine-dependent carbamoyl-phosphate synthase Aspartate carbamoyltransferase Dihydroorotase, [Score=60.1, Expect=2e-09]} {Smed: dd_Smed_v6_3906_0_1, dd_Smed_v6_3906_0_1, [RH, Score=405, Expect=1e-141]} {RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1310_20910, RNA1509_10847, RNA1509_36418, RNA1509_38947} {RNA1509_10847, RNA1509_36418, RNA1509_38947, RNA815_9039}
2.	MligTC455_51575	571	11.89	Mlig455_022958	Neo: - Age: Up-Down-Down	CCDC57	0.966	-	-	-	0.966	-	-	Mlig455_022958 {REF} {Length: 3808} {Human: ENSG00000176155, CCDC57, coiled-coil domain containing 57, [RH, Score=111, Expect=2e-24]} {Smed: dd_Smed_v6_10967_0_1, dd_Smed_v6_10967_0_1, [RH, Score=201, Expect=1e-53]} {RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404} {RNA1310_3169, RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404} {RNA1509_12720, RNA1509_57308, RNA1509_57386, RNA1509_9404, RNA815_2625}
3.	MligTC455_33124	1010	21.03	Mlig455_063486	Neo: - Age: Down-Up-Down	SYP	0.955	-	-	-	0.955	-	-	Mlig455_063486 {REF} {Length: 2775} {Pfam: Membrane-associating domain [PF01284.25, score=105.1]} {Human: ENSG00000102003, SYP, synaptophysin, [RH, Score=162, Expect=6e-48]; ENSG00000163630, SYNPR, synaptoporin, [RH, Score=160, Expect=1e-47]} {Mouse: ENSMUSG00000031144, Syp, synaptophysin, [RH, Score=160, Expect=2e-47]; ENSMUSG00000056296, Synpr, synaptoporin, [RH, Score=158, Expect=5e-47]} {Celegans: WBGene00004979, sph-1, SynaptoPHysin, [RH, Score=79.3, Expect=1e-17]} {Smed: dd_Smed_v6_682_0_1, dd_Smed_v6_682_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_20189} {RNA1310_9076} {RNA815_6504}
4.	MligTC455_50564	726	15.12	Mlig455_049263, Mlig455_050605	Neo: - Age: Down-Up-Down	CALM1, CALM2	0.953	-	-	-	0.953	-	-	Mlig455_049263 {REF} {Length: 1880} {Pfam: EF hand [PF00036.34, score=103.2]; EF-hand domain pair [PF13499.8, score=98.0]; EF-hand domain [PF13405.8, score=86.3]; EF-hand domain pair [PF13833.8, score=78.9]; EF hand [PF13202.8, score=77.1]; EF-hand domain [PF14658.8, score=37.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.4]; EF-hand domain [PF08976.13, score=22.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=132, Expect=2e-39]; ENSG00000143933, CALM2, calmodulin 2, [Score=131, Expect=1e-38]; ENSG00000160014, CALM3, calmodulin 3, [Score=130, Expect=7e-39]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=130, Expect=5e-39]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=130, Expect=5e-39]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=130, Expect=5e-39]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=126, Expect=2e-37]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=129, Expect=8e-39]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=129, Expect=7e-39]} {Smed: dd_Smed_v6_3441_0_1, dd_Smed_v6_3441_0_1, [RH, Score=128, Expect=3e-38]} {RNA1509_50656} {RNA1310_18704, RNA1509_50656} {RNA1509_50656, RNA815_15069.2} Mlig455_050605 {REF} {Length: 1042} {Pfam: EF hand [PF00036.34, score=74.5]; EF-hand domain pair [PF13833.8, score=63.2]; EF-hand domain pair [PF13499.8, score=62.2]; EF hand [PF13202.8, score=60.1]; EF-hand domain [PF13405.8, score=56.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=22.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=87.4, Expect=4e-22]; ENSG00000160014, CALM3, calmodulin 3, [Score=86.7, Expect=1e-22]; ENSG00000198668, CALM1, calmodulin 1, [Score=86.7, Expect=1e-22]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=87.8, Expect=3e-22]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=86.7, Expect=8e-23]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=86.7, Expect=2e-22]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=85.5, Expect=5e-22]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=85.5, Expect=1e-22]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=85.5, Expect=3e-22]} {RNA1509_50656} {RNA1310_18022} {RNA815_15069.1}

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