TomoSeq data search

Data search

Results for MligTC455_33135

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33135

62

1.29

Mlig455_063128

Neo: Irradiation

Age: -

DNAJC9

Mlig455_063128 {REF} {Length: 1872} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=71.2]} {Human: ENSG00000213551, DNAJC9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=198, Expect=8e-62]} {Mouse: ENSMUSG00000021811, Dnajc9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=199, Expect=2e-62]} {Dmel: FBgn0037878, CG6693, [RH, Score=167, Expect=7e-50]} {Celegans: WBGene00001041, dnj-23, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=139, Expect=7e-40]} {Smed: dd_Smed_v6_7703_0_1, dd_Smed_v6_7703_0_1, [RH, Score=154, Expect=1e-45]} {RNA1509_13475, RNA1509_20680} {RNA1310_18119, RNA1509_13475, RNA1509_20680} {RNA1509_13475, RNA1509_20680, RNA815_4493}

Cumulative graph for MligTC455_33135

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.529	1.601	0.99968	1.00000
RegionR2	0.067	1.601	0.89077	1.00000
RegionR3	1.199	1.601	0.33904	0.87542
RegionR4	1.285	1.601	0.31052	0.62520
RegionR5	2.265	1.601	0.02763	0.12212
RegionR6	0.688	1.601	0.56267	1.00000
RegionR7	1.66	1.601	0.33118	0.96607
RegionR8	-2.635	1.601	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.68	1.601	0.99982	1.00000
RegenerationR2	4.207	1.601	0.00029	0.02289
RegenerationR3	1.872	1.601	0.08565	0.47682
RegenerationR4	1.775	1.601	0.07600	0.43852
RegenerationR5	0.862	1.601	0.27679	0.70596
RegenerationR6	3.611	1.601	0.00116	0.03763
RegenerationBL	4.444	1.601	0.00285	0.04537
RegenerationTP	2.435	1.601	0.34873	0.79035

Genes with expression patterns similar to MligTC455_33135

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33135	62	1.29	Mlig455_063128	Neo: Irradiation Age: -	DNAJC9	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_063128 {REF} {Length: 1872} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=71.2]} {Human: ENSG00000213551, DNAJC9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=198, Expect=8e-62]} {Mouse: ENSMUSG00000021811, Dnajc9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=199, Expect=2e-62]} {Dmel: FBgn0037878, CG6693, [RH, Score=167, Expect=7e-50]} {Celegans: WBGene00001041, dnj-23, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=139, Expect=7e-40]} {Smed: dd_Smed_v6_7703_0_1, dd_Smed_v6_7703_0_1, [RH, Score=154, Expect=1e-45]} {RNA1509_13475, RNA1509_20680} {RNA1310_18119, RNA1509_13475, RNA1509_20680} {RNA1509_13475, RNA1509_20680, RNA815_4493}
2.	MligTC455_19206	81	1.68	Mlig455_005179	Neo: Int S/G2/M Age: -	TIMELESS	2.556	0.808	0.796	-	-	-	0.952	Mlig455_005179 {REF} {Length: 5270} {TRANSSPLICED} {Pfam: Timeless protein [PF04821.16, score=144.6]} {Human: ENSG00000111602, TIMELESS, timeless circadian regulator, [RH, Score=330, Expect=2e-93]} {Mouse: ENSMUSG00000039994, Timeless, timeless circadian clock 1, [RH, Score=321, Expect=2e-90]} {Dmel: FBgn0038118, timeout, [Score=250, Expect=4e-67]} {Celegans: WBGene00006571, tim-1, Protein timeless homolog, [RH, Score=146, Expect=5e-35]} {Smed: dd_Smed_v6_19257_0_2, dd_Smed_v6_19257_0_2, [RH, Score=235, Expect=9e-65]} {RNA1509_18295} {RNA1310_1716.2} {RNA815_12908}
3.	MligTC455_38129	57	1.19	Mlig455_037989	Neo: - Age: -	ANK3	1.773	-	-	-	0.814	0.959	-	Mlig455_037989 {REF} {Length: 4695} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=336.2]; Ankyrin repeats (many copies) [PF13637.8, score=255.9]; Ankyrin repeat [PF00023.32, score=230.6]; Ankyrin repeats (many copies) [PF13857.8, score=219.5]; Ankyrin repeat [PF13606.8, score=216.4]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=309, Expect=2e-85]; ENSG00000029534, ANK1, ankyrin 1, [Score=301, Expect=8e-83]; ENSG00000145362, ANK2, ankyrin 2, [Score=297, Expect=1e-81]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=308, Expect=2e-85]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=301, Expect=1e-84]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=298, Expect=2e-84]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=303, Expect=4e-87]} {RNA1509_40711} {RNA1310_1924, RNA1509_40711} {RNA1509_40711, RNA815_2799}
4.	MligTC455_17336	156	3.24	Mlig455_000033	Neo: - Age: logFC(26M/2M)=-0.295	NTN1	0.993	-	-	-	0.993	-	-	Mlig455_000033 {REF} {Length: 4688} {Pfam: Laminin N-terminal (Domain VI) [PF00055.19, score=121.0]; Laminin EGF domain [PF00053.26, score=68.8]; UNC-6/NTR/C345C module [PF01759.23, score=41.9]} {Human: ENSG00000065320, NTN1, netrin 1, [RH, Score=337, Expect=1e-105]} {Mouse: ENSMUSG00000020902, Ntn1, netrin 1, [Score=333, Expect=9e-105]} {Dmel: FBgn0015773, NetA, Netrin-A, [RH, Score=289, Expect=1e-86]} {Celegans: WBGene00006746, unc-6, Netrin unc-6, [RH, Score=291, Expect=6e-89]} {Smed: dd_Smed_v6_14852_0_1, dd_Smed_v6_14852_0_1, [RH, Score=293, Expect=4e-89]} {RNA1509_17008, RNA1509_52088, RNA1509_59596} {RNA1310_3999, RNA1509_17008, RNA1509_52088, RNA1509_59596} {RNA1509_17008, RNA1509_52088, RNA1509_59596, RNA815_18383}
5.	MligTC455_21066	306	6.38	Mlig455_036488	Neo: - Age: logFC(26M/2M)=-0.511 Region-enriched R2: 1.835/0.04804	RABEPK	0.985	-	-	-	0.985	-	-	Mlig455_036488 {REF} {Length: 3248} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=103.2]; Galactose oxidase, central domain [PF13415.8, score=88.3]; Kelch motif [PF13854.8, score=80.8]; Kelch motif [PF13964.8, score=78.9]; Kelch motif [PF01344.27, score=56.4]; Kelch motif [PF07646.17, score=53.5]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [RH, Score=202, Expect=8e-61]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [RH, Score=195, Expect=3e-58]} {Dmel: FBgn0040344, CG3711, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6387_0_1, dd_Smed_v6_6387_0_1, [Score=56.6, Expect=1e-08]} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1310_16584, RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075, RNA815_18867}
6.	MligTC455_45050	55	1.14	Mlig455_067805	Neo: - Age: -	ADSL	0.959	-	-	-	-	-	0.959	Mlig455_067805 {REF} {Length: 3003} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=80.8]} {Human: ENSG00000239900, ADSL, adenylosuccinate lyase, [Score=447, Expect=2e-155]} {Mouse: ENSMUSG00000022407, Adsl, adenylosuccinate lyase, [Score=446, Expect=3e-155]} {Dmel: FBgn0038467, AdSL, Adenylosuccinate Lyase, [Score=431, Expect=1e-148]} {Celegans: WBGene00011064, adsl-1, Adenylosuccinate lyase, [Score=314, Expect=2e-104]} {Smed: dd_Smed_v6_2280_0_1, dd_Smed_v6_2280_0_1, [Score=416, Expect=4e-143]} {RNA1509_16456} {RNA1310_14851} {RNA815_12501}
7.	MligTC455_38748	58	1.21	Mlig455_061816	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_061816 {REF} {Length: 1047} {RNA1509_29037} {RNA1310_1430.1} {RNA815_36259}
8.	MligTC455_25167	113	2.36	Mlig455_052954, Mlig455_061057	Neo: - Age: -	CLIP3	0.956	-	-	-	-	0.956	-	Mlig455_052954 {REF} {Length: 2739} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=231.4]; Ankyrin repeats (3 copies) [PF12796.9, score=47.5]; Ankyrin repeat [PF00023.32, score=28.7]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]} {Human: ENSG00000105270, CLIP3, CAP-Gly domain containing linker protein 3, [RH, Score=226, Expect=1e-65]} {Mouse: ENSMUSG00000013921, Clip3, CAP-GLY domain containing linker protein 3, [RH, Score=223, Expect=8e-65]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [Score=145, Expect=5e-36]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [Score=64.3, Expect=2e-11]} {Smed: dd_Smed_v6_6540_0_1, dd_Smed_v6_6540_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_29697} {RNA1310_15773} {RNA815_18829} Mlig455_061057 {REF} {Length: 372} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=37.2]} {RNA1509_26416} {RNA1310_51603} {RNA815_10138}

Berezikov Lab - 2020-2021 © ERIBA