Data search


search
Exact
Search

Results for MligTC455_38129

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38129 57 1.19 Mlig455_037989

Neo: -

Age: -

ANK3 Mlig455_037989 {REF} {Length: 4695} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=336.2]; Ankyrin repeats (many copies) [PF13637.8, score=255.9]; Ankyrin repeat [PF00023.32, score=230.6]; Ankyrin repeats (many copies) [PF13857.8, score=219.5]; Ankyrin repeat [PF13606.8, score=216.4]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=309, Expect=2e-85]; ENSG00000029534, ANK1, ankyrin 1, [Score=301, Expect=8e-83]; ENSG00000145362, ANK2, ankyrin 2, [Score=297, Expect=1e-81]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=308, Expect=2e-85]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=301, Expect=1e-84]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=298, Expect=2e-84]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=303, Expect=4e-87]} {RNA1509_40711} {RNA1310_1924, RNA1509_40711} {RNA1509_40711, RNA815_2799}

Cumulative graph for MligTC455_38129

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.09 1.561 1.00000 1.00000
RegionR2 0.859 1.561 0.53776 0.90687
RegionR3 0.805 1.561 0.45604 0.96702
RegionR4 2.343 1.561 0.12782 0.36145
RegionR5 -0.983 1.561 0.92195 1.00000
RegionR6 1.021 1.561 0.37622 0.95656
RegionR7 -4.528 1.561 1.00000 1.00000
RegionR8 0.574 1.561 0.64905 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.688 1.561 0.99987 1.00000
RegenerationR2 -0.08 1.561 0.96223 1.00000
RegenerationR3 -1.134 1.561 0.26237 0.69736
RegenerationR4 -0.933 1.561 0.42454 0.82785
RegenerationR5 0.569 1.561 0.62329 0.91988
RegenerationR6 -0.045 1.561 0.95567 1.00000
RegenerationBL 2.251 1.561 0.17448 0.50064
RegenerationTP 1.685 1.561 0.39709 0.82716


Genes with expression patterns similar to MligTC455_38129

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38129 57 1.19 Mlig455_037989

Neo: -

Age: -

ANK3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037989 {REF} {Length: 4695} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=336.2]; Ankyrin repeats (many copies) [PF13637.8, score=255.9]; Ankyrin repeat [PF00023.32, score=230.6]; Ankyrin repeats (many copies) [PF13857.8, score=219.5]; Ankyrin repeat [PF13606.8, score=216.4]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=309, Expect=2e-85]; ENSG00000029534, ANK1, ankyrin 1, [Score=301, Expect=8e-83]; ENSG00000145362, ANK2, ankyrin 2, [Score=297, Expect=1e-81]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=308, Expect=2e-85]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=301, Expect=1e-84]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=298, Expect=2e-84]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=303, Expect=4e-87]} {RNA1509_40711} {RNA1310_1924, RNA1509_40711} {RNA1509_40711, RNA815_2799}
2. MligTC455_27237 28 0.59 Mlig455_015440

Neo: -

Age: logFC(26M/2M)=0.295

1.841 - - 0.975 - - 0.866 Mlig455_015440 {REF} {Length: 9008} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=20.4]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=71.6, Expect=2e-14]} {RNA1509_28127, RNA1509_7380, RNA1509_881} {RNA1310_1765, RNA1509_7380, RNA1509_881} {RNA1509_7380, RNA1509_881, RNA815_2484.1}
3. MligTC455_33135 62 1.29 Mlig455_063128

Neo: Irradiation

Age: -

DNAJC9 1.773 - - - 0.814 0.959 - Mlig455_063128 {REF} {Length: 1872} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=71.2]} {Human: ENSG00000213551, DNAJC9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=198, Expect=8e-62]} {Mouse: ENSMUSG00000021811, Dnajc9, DnaJ heat shock protein family (Hsp40) member C9, [RH, Score=199, Expect=2e-62]} {Dmel: FBgn0037878, CG6693, [RH, Score=167, Expect=7e-50]} {Celegans: WBGene00001041, dnj-23, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=139, Expect=7e-40]} {Smed: dd_Smed_v6_7703_0_1, dd_Smed_v6_7703_0_1, [RH, Score=154, Expect=1e-45]} {RNA1509_13475, RNA1509_20680} {RNA1310_18119, RNA1509_13475, RNA1509_20680} {RNA1509_13475, RNA1509_20680, RNA815_4493}
4. MligTC455_20468 65 1.35 Mlig455_024540, Mlig455_024576

Neo: -

Age: -

POU4F1, POU4F2 1.695 - - 0.972 0.723 - -

Mlig455_024540 {REF} {Length: 3020} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.9]; Homeodomain [PF00046.31, score=68.2]; Helix-turn-helix domain [PF13560.8, score=19.9]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=4e-86]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=270, Expect=2e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=264, Expect=6e-85]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=2e-86]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=269, Expect=4e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=264, Expect=4e-85]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=259, Expect=1e-82]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=239, Expect=4e-76]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=308, Expect=3e-102]} {RNA1509_57422} {RNA1310_14116, RNA1509_57422} {RNA1509_57422, RNA815_35899}

Mlig455_024576 {REF} {Length: 2574} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=108.5]; Homeodomain [PF00046.31, score=67.5]} {Human: ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=271, Expect=3e-85]; ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=270, Expect=1e-84]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=265, Expect=1e-83]} {Mouse: ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=270, Expect=3e-85]; ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=270, Expect=9e-85]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=265, Expect=7e-84]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=260, Expect=1e-81]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=241, Expect=1e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=310, Expect=3e-101]} {RNA1509_57422} {RNA1310_14116} {RNA815_35899}
5. MligTC455_49710 69 1.45 Mlig455_064824

Neo: -

Age: -

0.987 - - 0.987 - - - Mlig455_064824 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_51983} {RNA1310_69193} {RNA815_28501}
6. MligTC455_24310 169 3.52 Mlig455_044934

Neo: -

Age: -

Region-enriched R2: 3.442/0.01506

SLC16A12 0.978 - - 0.978 - - - Mlig455_044934 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=125.7]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [RH, Score=187, Expect=2e-53]} {Dmel: FBgn0033095, CG3409, [Score=138, Expect=1e-34]} {Celegans: WBGene00021227, mct-1, MonoCarboxylate Transporter family, [Score=117, Expect=3e-28]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=3e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_6321}
7. MligTC455_46353 31 0.64 Mlig455_001059

Neo: -

Age: -

0.975 - - 0.975 - - - Mlig455_001059 {REF} {Length: 2081} {RNA1310_38644} {RNA815_43709}
8. MligTC455_00647 76 1.58 Mlig455_032515

Neo: -

Age: -

0.969 - - - 0.969 - - Mlig455_032515 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52118}
9. MligTC455_28236 57 1.19 Mlig455_006755, Mlig455_054681

Neo: -

Age: -

0.966 - - 0.966 - - -

Mlig455_006755 {REF} {Length: 1436} {NoTransDecoderORF} {RNA1509_44500} {RNA1310_4439.1} {RNA815_12729}

Mlig455_054681 {REF} {Length: 1105} {NoTransDecoderORF} {RNA1509_2932} {RNA1310_4439.1} {RNA815_1450.1}
10. MligTC455_38748 58 1.21 Mlig455_061816

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_061816 {REF} {Length: 1047} {RNA1509_29037} {RNA1310_1430.1} {RNA815_36259}
11. MligTC455_41205 44 0.91 Mlig455_002062

Neo: -

Age: -

B4GALT2 0.965 - - - 0.965 - - Mlig455_002062 {REF} {Length: 2766} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=126.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=92.4]} {Human: ENSG00000117411, B4GALT2, beta-1,4-galactosyltransferase 2, [Score=218, Expect=3e-66]; ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=212, Expect=8e-64]; ENSG00000121578, B4GALT4, beta-1,4-galactosyltransferase 4, [Score=211, Expect=5e-64]; ENSG00000158470, B4GALT5, beta-1,4-galactosyltransferase 5, [Score=209, Expect=1e-62]; ENSG00000118276, B4GALT6, beta-1,4-galactosyltransferase 6, [Score=208, Expect=2e-62]} {Mouse: ENSMUSG00000028541, B4galt2, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2, [Score=218, Expect=1e-66]; ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=218, Expect=6e-66]; ENSMUSG00000017929, B4galt5, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5, [Score=211, Expect=1e-63]; ENSMUSG00000056124, B4galt6, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6, [Score=209, Expect=7e-63]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=206, Expect=1e-61]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=221, Expect=1e-67]} {Smed: dd_Smed_v6_13813_0_1, dd_Smed_v6_13813_0_1, [RH, Score=242, Expect=7e-77]} {RNA1310_30379} {RNA815_40748}
12. MligTC455_41462 113 2.36 Mlig455_015878

Neo: -

Age: -

0.965 - - 0.965 - - - Mlig455_015878 {REF} {Length: 654} {NoTransDecoderORF}
13. MligTC455_20729 90 1.86 Mlig455_050490

Neo: -

Age: -

GABBR2 0.964 - - 0.964 - - - Mlig455_050490 {REF} {Length: 2996} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=131.5]; Receptor family ligand binding region [PF01094.30, score=107.3]; Periplasmic binding protein [PF13458.8, score=25.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=245, Expect=7e-69]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=244, Expect=8e-69]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=247, Expect=6e-69]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=220, Expect=7e-61]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=122, Expect=2e-28]} {RNA1509_23979} {RNA1310_12425} {RNA815_12865}
14. MligTC455_41920 49 1.01 Mlig455_048072

Neo: -

Age: -

0.963 - - 0.963 - - - Mlig455_048072 {REF} {Length: 2492} {Pfam: Innexin [PF00876.20, score=330.4]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=88.6, Expect=1e-18]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=254, Expect=8e-80]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=296, Expect=3e-95]} {RNA1509_56200} {RNA1310_9243} {RNA815_4486.1}
15. MligTC455_03930 234 4.88 Mlig455_000392, Mlig455_000393, Mlig455_067965

Neo: -

Age: -

STOM, STOML3 0.95 - - 0.950 - - -

Mlig455_000392 {REF} {Length: 1261} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=49.4]} {Human: ENSG00000133115, STOML3, stomatin like 3, [Score=121, Expect=8e-34]; ENSG00000148175, STOM, stomatin, [Score=119, Expect=7e-33]} {Mouse: ENSMUSG00000027744, Stoml3, stomatin (Epb7.2)-like 3, [Score=120, Expect=2e-33]; ENSMUSG00000026880, Stom, stomatin, [Score=116, Expect=5e-32]} {Dmel: FBgn0260657, CG42540, [Score=120, Expect=3e-32]} {Celegans: WBGene00006068, sto-6, STOmatin, [Score=147, Expect=4e-44]} {Smed: dd_Smed_v6_6562_0_1, dd_Smed_v6_6562_0_1, [Score=154, Expect=7e-46]} {RNA1509_39119} {RNA1310_36188} {RNA815_4616.2}

Mlig455_000393 {REF} {Length: 314} {NoTransDecoderORF} {RNA1310_87113} {RNA815_45729}

Mlig455_067965 {REF} {Length: 2337} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=113.5]} {Human: ENSG00000148175, STOM, stomatin, [Score=296, Expect=4e-98]; ENSG00000133115, STOML3, stomatin like 3, [Score=295, Expect=2e-97]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=293, Expect=5e-97]; ENSMUSG00000027744, Stoml3, stomatin (Epb7.2)-like 3, [Score=293, Expect=4e-97]} {Dmel: FBgn0260657, CG42540, [Score=310, Expect=4e-101]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=306, Expect=7e-101]} {Smed: dd_Smed_v6_16206_0_1, dd_Smed_v6_16206_0_1, [RH, Score=373, Expect=4e-128]} {RNA1509_39119} {RNA1310_36188} {RNA815_7860}
16. MligTC455_33845 53 1.1 Mlig455_004238

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_004238 {REF} {Length: 727} {NoTransDecoderORF} {RNA1310_127880.2} {RNA815_42471}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA