Data search
Results for MligTC455_33240
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33240 | 98 | 2.04 | Mlig455_012016, Mlig455_012479 | Neo: - Age: Up-Down-Down |
RABGGTA | Mlig455_012016 {REF} {Length: 2651} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=53.1, Expect=2e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=7e-12]} {RNA1310_32134} {RNA815_15162} Mlig455_012479 {REF} {Length: 2764} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=52.8, Expect=3e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=6e-12]} {RNA1310_32134} {RNA815_15162} |
Cumulative graph for MligTC455_33240
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.923 | 1.995 | 0.16593 | 0.78985 | |
| RegionR2 | 0.393 | 1.995 | 0.64200 | 0.97921 | |
| RegionR3 | -0.542 | 1.995 | 0.94513 | 1.00000 | |
| RegionR4 | 1.57 | 1.995 | 0.12650 | 0.35906 | |
| RegionR5 | 0.358 | 1.995 | 0.59958 | 0.95708 | |
| RegionR6 | -0.489 | 1.995 | 0.93777 | 1.00000 | |
| RegionR7 | 0.93 | 1.995 | 0.39888 | 1.00000 | |
| RegionR8 | -5.144 | 1.995 | 0.10050 | 0.59465 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.172 | 1.995 | 0.24050 | 0.96582 | |
| RegenerationR2 | -0.462 | 1.995 | 0.55444 | 0.89549 | |
| RegenerationR3 | 0.669 | 1.995 | 0.45922 | 0.83710 | |
| RegenerationR4 | -0.678 | 1.995 | 0.41553 | 0.82354 | |
| RegenerationR5 | -0.095 | 1.995 | 0.89256 | 1.00000 | |
| RegenerationR6 | 1.771 | 1.995 | 0.03777 | 0.24258 | |
| RegenerationBL | -2.906 | 1.995 | 1.00000 | 1.00000 | |
| RegenerationTP | 1.125 | 1.995 | 0.58681 | 0.95385 |
Genes with expression patterns similar to MligTC455_33240
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33240 | 98 | 2.04 | Mlig455_012016, Mlig455_012479 | Neo: - Age: Up-Down-Down |
RABGGTA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012016 {REF} {Length: 2651} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=53.1, Expect=2e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=7e-12]} {RNA1310_32134} {RNA815_15162} Mlig455_012479 {REF} {Length: 2764} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=52.8, Expect=3e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=6e-12]} {RNA1310_32134} {RNA815_15162} |
| 2. | MligTC455_09815 | 233 | 4.84 | Mlig455_069904 | Neo: - Age: - Region-enriched R5: 1.280/0.02090 |
1.675 | 0.706 | - | - | - | 0.969 | - | Mlig455_069904 {REF} {Length: 2860} {TRANSSPLICED} {RNA1509_48847} {RNA1310_16604, RNA1509_48847} {RNA1509_48847, RNA815_16640} | |
| 3. | MligTC455_23166 | 46 | 0.95 | Mlig455_010298 | Neo: - Age: - |
OGG1 | 1.662 | - | - | - | 0.956 | 0.706 | - | Mlig455_010298 {REF} {Length: 1352} {TRANSSPLICED} {Pfam: 8-oxoguanine DNA glycosylase, N-terminal domain [PF07934.14, score=77.9]; HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=21.0]} {Human: ENSG00000114026, OGG1, 8-oxoguanine DNA glycosylase, [Score=194, Expect=2e-58]} {Mouse: ENSMUSG00000030271, Ogg1, 8-oxoguanine DNA-glycosylase 1, [Score=186, Expect=3e-55]} {Dmel: FBgn0027864, Ogg1, 8-oxoguanine DNA glycosylase, [Score=154, Expect=3e-43]} {Smed: dd_Smed_v6_14471_0_2, dd_Smed_v6_14471_0_2, [Score=139, Expect=3e-38]} {RNA1509_12040} {RNA1310_54599} {RNA815_7397} |
| 4. | MligTC455_07771 | 25 | 0.53 | Mlig455_003398 | Neo: - Age: Up-Down-Up Region-enriched R2: 7.012/0.01381 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_003398 {REF} {Length: 1701} {RNA1509_48780} {RNA1310_65644.1} {RNA815_18118.2} | |
| 5. | MligTC455_43832 | 1124 | 23.42 | Mlig455_021852, Mlig455_021927, Mlig455_022019 | Neo: Irradiation Age: logFC(26M/2M)=0.255 Region-enriched R5: 1.315/0.00106 |
RCC1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_021852 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=361, Expect=1e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=363, Expect=2e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=267, Expect=5e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=310, Expect=2e-97]} {RNA1509_16612, RNA1509_36762} {RNA1310_17834, RNA1509_36762} {RNA1509_36762, RNA815_21477} Mlig455_021927 {REF} {Length: 3409} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=232.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=360, Expect=5e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=360, Expect=4e-119]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=268, Expect=3e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=309, Expect=3e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477} Mlig455_022019 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.5]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.7]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=363, Expect=9e-120]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=365, Expect=1e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=271, Expect=3e-83]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=127, Expect=5e-31]} {Smed: dd_Smed_v6_4136_0_2, dd_Smed_v6_4136_0_2, [RH, Score=309, Expect=5e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477} |
| 6. | MligTC455_39933 | 508 | 10.59 | Mlig455_039923, Mlig455_041199, Mlig455_070099 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_039923 {REF} {Length: 1686} {RNA1509_33787} {RNA1310_32325} {RNA815_38543} Mlig455_041199 {REF} {Length: 998} {NoTransDecoderORF} {RNA1509_42668} {RNA1310_62004, RNA1509_42668} {RNA1509_42668, RNA815_38543} Mlig455_070099 {REF} {Length: 1993} {RNA1509_33787} {RNA1310_32325} {RNA815_38543} |
|
| 7. | MligTC455_25387 | 40 | 0.84 | Mlig455_012092 | Neo: - Age: - |
BIRC8 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_012092 {REF} {Length: 3441} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=80.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.3]; Prokaryotic RING finger family 4 [PF14447.8, score=19.9]} {Human: ENSG00000163098, BIRC8, baculoviral IAP repeat containing 8, [RH, Score=94.0, Expect=6e-21]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [RH, Score=114, Expect=3e-26]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=137, Expect=4e-34]} {Celegans: WBGene00017342, F10D7.5, [Score=49.7, Expect=7e-06]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=69.3, Expect=2e-12]} {RNA1509_10778} {RNA1310_3284.1} {RNA815_899.3} |
| 8. | MligTC455_17421 | 67 | 1.39 | Mlig455_008476 | Neo: - Age: - |
ARL4A | 0.954 | 0.954 | - | - | - | - | - | Mlig455_008476 {REF} {Length: 1473} {Pfam: ADP-ribosylation factor family [PF00025.23, score=103.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=47.6]; 50S ribosome-binding GTPase [PF01926.25, score=25.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.6]; AAA ATPase domain [PF13191.8, score=19.8]; NACHT domain [PF05729.14, score=19.5]} {Human: ENSG00000122644, ARL4A, ADP ribosylation factor like GTPase 4A, [Score=94.7, Expect=5e-23]; ENSG00000113595, TRIM23, tripartite motif containing 23, [Score=92.0, Expect=2e-20]} {Mouse: ENSMUSG00000047446, Arl4a, ADP-ribosylation factor-like 4A, [Score=95.5, Expect=2e-23]; ENSMUSG00000021712, Trim23, tripartite motif-containing 23, [Score=92.4, Expect=1e-20]; ENSMUSG00000034936, Arl4d, ADP-ribosylation factor-like 4D, [Score=92.0, Expect=3e-22]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=94.0, Expect=3e-23]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=89.7, Expect=1e-21]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=100, Expect=1e-25]} {RNA1310_31391} {RNA815_53202} |
| 9. | MligTC455_23786 | 47 | 0.98 | Mlig455_021109 | Neo: - Age: Up-Up-Down |
BRSK1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_021109 {REF} {Length: 3593} {Pfam: Protein kinase domain [PF00069.27, score=35.3]} {Human: ENSG00000160469, BRSK1, BR serine/threonine kinase 1, [Score=124, Expect=2e-29]; ENSG00000174672, BRSK2, BR serine/threonine kinase 2, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000053046, Brsk2, BR serine/threonine kinase 2, [RH, Score=124, Expect=3e-30]} {Dmel: FBgn0036544, sff, sugar-free frosting, [Score=148, Expect=1e-37]} {Celegans: WBGene00004719, sad-1, Serine/threonine kinase SAD-1, [Score=158, Expect=2e-41]} {Smed: dd_Smed_v6_5328_1_3, dd_Smed_v6_5328_1_3, [Score=187, Expect=3e-52]} {RNA1509_20961} {RNA1310_15822} {RNA815_12388} |
| 10. | MligTC455_44672 | 22 | 0.46 | Mlig455_011312 | Neo: - |
CIAO1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_011312 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=165.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=73.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=40.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=26.9]; Transcription factor IIIC subunit delta N-term [PF12657.9, score=23.3]; WD40-like Beta Propeller Repeat [PF07676.14, score=22.9]; Proteasome subunit A N-terminal signature [PF10584.11, score=20.0]; IKI3 family [PF04762.14, score=19.3]} {Human: ENSG00000144021, CIAO1, cytosolic iron-sulfur assembly component 1, [RH, Score=269, Expect=3e-88]} {Mouse: ENSMUSG00000003662, Ciao1, cytosolic iron-sulfur protein assembly 1, [RH, Score=270, Expect=1e-88]} {Dmel: FBgn0033972, Ciao1, [RH, Score=266, Expect=2e-87]} {Celegans: WBGene00012479, Y18D10A.9, Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog, [RH, Score=211, Expect=4e-66]} {Smed: dd_Smed_v6_6661_0_1, dd_Smed_v6_6661_0_1, [RH, Score=243, Expect=3e-78]} {RNA1509_6667} {RNA1310_26308} {RNA815_12985} |