M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09815

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09815 233 4.84 Mlig455_069904

Neo: -

Age: -

Region-enriched R5: 1.280/0.02090

 Mlig455_069904 {REF} {Length: 2860} {TRANSSPLICED} {RNA1509_48847} {RNA1310_16604, RNA1509_48847} {RNA1509_48847, RNA815_16640}

Cumulative graph for MligTC455_09815

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.504 2.85 0.36110 1.00000
RegionR2 0.791 2.85 0.24675 0.62404
RegionR3 0.628 2.85 0.21956 0.76092
RegionR4 -0.451 2.85 0.45565 0.78394
RegionR5 1.28 2.85 0.00254 0.02090
RegionR6 0.524 2.85 0.33832 0.92570
RegionR7 0.674 2.85 0.29901 0.93385
RegionR8 -1.941 2.85 0.09996 0.59409

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.603 2.85 0.42638 1.00000
RegenerationR2 -0.029 2.85 0.95003 1.00000
RegenerationR3 -0.056 2.85 0.91375 1.00000
RegenerationR4 0.344 2.85 0.54970 0.89271
RegenerationR5 -0.489 2.85 0.27119 0.70263
RegenerationR6 0.889 2.85 0.09241 0.37827
RegenerationBL -1.698 2.85 0.19337 0.52883
RegenerationTP -0.841 2.85 0.50600 0.90408


Genes with expression patterns similar to MligTC455_09815

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09815 233 4.84 Mlig455_069904

Neo: -

Age: -

Region-enriched R5: 1.280/0.02090

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069904 {REF} {Length: 2860} {TRANSSPLICED} {RNA1509_48847} {RNA1310_16604, RNA1509_48847} {RNA1509_48847, RNA815_16640}
2. MligTC455_51277 158 3.29 Mlig455_049694

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.977/0.02487

 DCPS 2.565 - - 0.955 - 0.809 0.801 Mlig455_049694 {REF} {Length: 2306} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=82.1]; Scavenger mRNA decapping enzyme (DcpS) N-terminal [PF05652.14, score=47.3]} {Human: ENSG00000110063, DCPS, decapping enzyme, scavenger, [RH, Score=228, Expect=1e-71]} {Mouse: ENSMUSG00000032040, Dcps, decapping enzyme, scavenger, [RH, Score=223, Expect=7e-70]} {Dmel: FBgn0037372, CG2091, [RH, Score=213, Expect=5e-66]} {Celegans: WBGene00000940, dcs-1, m7GpppX diphosphatase, [RH, Score=203, Expect=6e-63]} {Smed: dd_Smed_v6_1924_0_1, dd_Smed_v6_1924_0_1, [RH, Score=190, Expect=4e-58]} {RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1310_19913, RNA1509_32508, RNA1509_51975, RNA1509_55727} {RNA1509_32508, RNA1509_51975, RNA1509_55727, RNA815_5168}
3. MligTC455_25997 236 4.92 Mlig455_069262

Neo: -

Age: -

Region-enriched R5: 1.777/0.04733

 1.867 - - 0.960 - 0.907 - Mlig455_069262 {REF} {Length: 4569} {TRANSSPLICED} {RNA1509_54304, RNA1509_56297} {RNA1310_24884, RNA1509_54304, RNA1509_56297} {RNA1509_54304, RNA1509_56297, RNA815_13578}
4. MligTC455_50242 658 13.71 Mlig455_010544, Mlig455_061792, Mlig455_061832

Neo: -

Age: -

Region-enriched R5: 2.437/0.00039

 1.796 - - 0.960 - 0.836 -

Mlig455_010544 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388, RNA1509_46524} {RNA1310_11073, RNA1509_46524} {RNA1509_46524, RNA815_6049}

Mlig455_061792 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073} {RNA815_6049}

Mlig455_061832 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073, RNA1509_22388} {RNA1509_22388, RNA815_6049}
5. MligTC455_35359 375 7.81 Mlig455_062928

Neo: -

Age: Up-Down-Down

 SCAP 1.692 - 0.736 0.956 - - - Mlig455_062928 {REF} {Length: 5472} {TRANSSPLICED} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=147.1]; Patched family [PF02460.20, score=59.8]; WD domain, G-beta repeat [PF00400.34, score=28.0]} {Human: ENSG00000114650, SCAP, SREBF chaperone, [RH, Score=364, Expect=8e-106]} {Mouse: ENSMUSG00000032485, Scap, SREBF chaperone, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033052, SCAP, SREBP cleavage activating protein, [RH, Score=289, Expect=2e-80]} {Celegans: WBGene00004744, scp-1, SREBP Cleavage activating Protein (SCAP) homolog, [RH, Score=236, Expect=1e-63]} {Smed: dd_Smed_v6_12222_0_1, dd_Smed_v6_12222_0_1, [RH, Score=366, Expect=2e-108]} {RNA1509_25017, RNA1509_28936} {RNA1310_1382.1, RNA1509_25017, RNA1509_28936} {RNA1509_25017, RNA1509_28936, RNA815_1411.1}
6. MligTC455_33240 98 2.04 Mlig455_012016, Mlig455_012479

Neo: -

Age: Up-Down-Down

 RABGGTA 1.675 0.706 - - - 0.969 -

Mlig455_012016 {REF} {Length: 2651} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.8]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=9e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=53.1, Expect=2e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=7e-12]} {RNA1310_32134} {RNA815_15162}

Mlig455_012479 {REF} {Length: 2764} {Pfam: Protein prenyltransferase alpha subunit repeat [PF01239.24, score=42.9]} {Human: ENSG00000100949, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]; ENSG00000285193, RABGGTA, Rab geranylgeranyltransferase subunit alpha, [Score=57.8, Expect=8e-09]} {Mouse: ENSMUSG00000040472, Rabggta, Rab geranylgeranyl transferase, a subunit, [Score=52.8, Expect=3e-07]} {Dmel: FBgn0027296, temp, tempura, [RH, Score=66.2, Expect=6e-12]} {RNA1310_32134} {RNA815_15162}
7. MligTC455_43832 1124 23.42 Mlig455_021852, Mlig455_021927, Mlig455_022019

Neo: Irradiation

Age: logFC(26M/2M)=0.255

Region-enriched R5: 1.315/0.00106

 RCC1 1.673 0.714 - - - 0.959 -

Mlig455_021852 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=361, Expect=1e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=363, Expect=2e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=267, Expect=5e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=310, Expect=2e-97]} {RNA1509_16612, RNA1509_36762} {RNA1310_17834, RNA1509_36762} {RNA1509_36762, RNA815_21477}

Mlig455_021927 {REF} {Length: 3409} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=232.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=360, Expect=5e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=360, Expect=4e-119]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=268, Expect=3e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=309, Expect=3e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477}

Mlig455_022019 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.5]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.7]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=363, Expect=9e-120]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=365, Expect=1e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=271, Expect=3e-83]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=127, Expect=5e-31]} {Smed: dd_Smed_v6_4136_0_2, dd_Smed_v6_4136_0_2, [RH, Score=309, Expect=5e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477}
8. MligTC455_49891 386 8.03 Mlig455_016073

Neo: -

Age: -

Region-enriched R5: 1.569/0.00576

 SLC44A1 1.667 - 0.717 0.950 - - - Mlig455_016073 {REF} {Length: 4090} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.3]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=262, Expect=1e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=5e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=258, Expect=4e-75]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=4e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=3e-84]} {RNA1509_16805, RNA1509_42975, RNA1509_57946} {RNA1310_5849, RNA1509_42975, RNA1509_57946} {RNA1509_42975, RNA1509_57946, RNA815_2956.1}
9. MligTC455_15756 43 0.89 Mlig455_006996

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_006996 {REF} {Length: 571} {Pfam: SEA domain [PF01390.22, score=24.1]; Predicted membrane protein (DUF2107) [PF09880.11, score=19.3]} {RNA1509_58111, RNA1509_58578} {RNA1310_40223, RNA1509_58111} {RNA1509_58111, RNA815_37309}
10. MligTC455_19241 948 19.75 Mlig455_002726, Mlig455_063341

Neo: -

Age: Up-Down-Up

Region-enriched R5: 2.258/0.00026

 DNAJC12 0.973 - - 0.973 - - -

Mlig455_002726 {REF} {Length: 879} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=65.9]} {Human: ENSG00000108176, DNAJC12, DnaJ heat shock protein family (Hsp40) member C12, [RH, Score=80.1, Expect=7e-19]} {Mouse: ENSMUSG00000036764, Dnajc12, DnaJ heat shock protein family (Hsp40) member C12, [RH, Score=77.4, Expect=7e-18]} {Dmel: FBgn0027654, jdp, [RH, Score=89.4, Expect=8e-23]} {Celegans: WBGene00010640, K07F5.16, [RH, Score=58.9, Expect=2e-11]} {Smed: dd_Smed_v6_9438_0_1, dd_Smed_v6_9438_0_1, [RH, Score=85.9, Expect=6e-22]} {RNA1509_27449} {RNA1310_40611, RNA1509_27449} {RNA1509_27449, RNA815_20228}

Mlig455_063341 {REF} {Length: 879} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=65.9]} {Human: ENSG00000108176, DNAJC12, DnaJ heat shock protein family (Hsp40) member C12, [RH, Score=80.1, Expect=7e-19]} {Mouse: ENSMUSG00000036764, Dnajc12, DnaJ heat shock protein family (Hsp40) member C12, [RH, Score=77.4, Expect=7e-18]} {Dmel: FBgn0027654, jdp, [RH, Score=89.4, Expect=8e-23]} {Celegans: WBGene00010640, K07F5.16, [RH, Score=58.9, Expect=2e-11]} {Smed: dd_Smed_v6_9438_0_1, dd_Smed_v6_9438_0_1, [RH, Score=85.9, Expect=6e-22]} {RNA1509_27449} {RNA1310_40611} {RNA815_20228}
11. MligTC455_41424 181 3.77 Mlig455_018196

Neo: -

Age: -

 BBS4 0.97 - - 0.970 - - - Mlig455_018196 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=132.0]; Tetratricopeptide repeat [PF00515.30, score=117.7]; Tetratricopeptide repeat [PF13181.8, score=99.9]; TPR repeat [PF13414.8, score=73.7]; Tetratricopeptide repeat [PF14559.8, score=56.0]; Tetratricopeptide repeat [PF13432.8, score=55.0]; Tetratricopeptide repeat [PF13371.8, score=54.8]; Tetratricopeptide repeat [PF13428.8, score=50.2]; Tetratricopeptide repeat [PF13424.8, score=50.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=49.8]; Tetratricopeptide repeat [PF13176.8, score=46.4]; Tetratricopeptide repeat [PF13431.8, score=40.4]; Tetratricopeptide repeat [PF13174.8, score=33.5]; Coatomer epsilon subunit [PF04733.16, score=22.6]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.8]} {Human: ENSG00000140463, BBS4, Bardet-Biedl syndrome 4, [RH, Score=496, Expect=6e-171]} {Mouse: ENSMUSG00000025235, Bbs4, Bardet-Biedl syndrome 4 (human), [RH, Score=492, Expect=1e-169]} {Dmel: FBgn0033578, BBS4, Bardet-Biedl syndrome 4, [RH, Score=252, Expect=5e-77]} {Celegans: WBGene00043992, bbs-4, Bardet-Biedl syndrome 4 protein homolog, [RH, Score=207, Expect=2e-60]} {Smed: dd_Smed_v6_11370_0_1, dd_Smed_v6_11370_0_1, [RH, Score=446, Expect=3e-152]} {RNA1509_10669, RNA1509_53697, RNA1509_59346} {RNA1310_19623.1, RNA1509_53697, RNA1509_59346} {RNA1509_53697, RNA1509_59346, RNA815_1541.1}
12. MligTC455_45494 220 4.59 Mlig455_033942

Neo: -

Age: -

 AFMID 0.968 - - 0.968 - - - Mlig455_033942 {REF} {Length: 3208} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF07859.15, score=27.7]; Alpha/beta hydrolase family [PF12697.9, score=25.0]} {Human: ENSG00000183077, AFMID, arylformamidase, [RH, Score=105, Expect=1e-25]} {Mouse: ENSMUSG00000017718, Afmid, arylformamidase, [RH, Score=129, Expect=4e-35]} {Dmel: FBgn0031821, KFase, Kynurenine formamidase, [RH, Score=104, Expect=9e-26]} {Celegans: WBGene00017051, afmd-1, ArylForMamiDase, [RH, Score=88.2, Expect=3e-20]} {Smed: dd_Smed_v6_12523_0_1, dd_Smed_v6_12523_0_1, [RH, Score=120, Expect=4e-32]} {RNA1509_21968, RNA1509_42924, RNA1509_59628} {RNA1310_33850.2, RNA1509_21968, RNA1509_42924, RNA1509_59628} {RNA1509_21968, RNA1509_42924, RNA1509_59628, RNA815_6864.1}
13. MligTC455_11750 437 9.11 Mlig455_050976

Neo: -

Age: logFC(26M/2M)=-0.564

 0.965 - - - - 0.965 - Mlig455_050976 {REF} {Length: 2145} {RNA1509_16212} {RNA1310_15461.1, RNA1509_16212} {RNA1509_16212, RNA815_8985.1}
14. MligTC455_12500 37 0.78 Mlig455_028967

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_028967 {REF} {Length: 276} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295}
15. MligTC455_48926 253 5.27 Mlig455_021971

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.527

 GSTZ1 0.964 - - - - 0.964 - Mlig455_021971 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Glutathione S-transferase, N-terminal domain [PF13417.8, score=68.3]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=64.0]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=54.8]} {Human: ENSG00000100577, GSTZ1, glutathione S-transferase zeta 1, [RH, Score=231, Expect=7e-77]} {Mouse: ENSMUSG00000021033, Gstz1, glutathione transferase zeta 1 (maleylacetoacetate isomerase), [RH, Score=238, Expect=7e-80]} {Dmel: FBgn0037697, GstZ2, Glutathione S transferase Z2, [RH, Score=230, Expect=1e-76]} {Celegans: WBGene00001790, gst-42, Probable maleylacetoacetate isomerase, [RH, Score=189, Expect=1e-60]} {Smed: dd_Smed_v6_1703_0_1, dd_Smed_v6_1703_0_1, [RH, Score=226, Expect=3e-75]} {RNA1509_16440} {RNA1310_16659.1} {RNA815_19786}
16. MligTC455_48567 358 7.45 Mlig455_043150

Neo: -

Age: -

Region-enriched R5: 1.668/0.02982

 0.963 - - 0.963 - - - Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1}
17. MligTC455_29821 225 4.69 Mlig455_010534

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_010534 {REF} {Length: 1710} {NoTransDecoderORF} {RNA1509_24136} {RNA1310_54446} {RNA815_22707}
18. MligTC455_43385 46 0.96 Mlig455_069735

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_069735 {REF} {Length: 1118} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_58258} {RNA815_51678}
19. MligTC455_03563 760 15.83 Mlig455_025786

Neo: Int S/G2/M

Age: -

 POLR2B 0.953 - - 0.953 - - - Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
20. MligTC455_29822 222 4.63 Mlig455_061799

Neo: -

Age: -

 PLAGL2 0.952 - - - - 0.952 - Mlig455_061799 {REF} {Length: 6222} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=24.4]; Zinc finger, C2H2 type [PF00096.28, score=23.9]} {Human: ENSG00000126003, PLAGL2, PLAG1 like zinc finger 2, [Score=61.6, Expect=5e-09]; ENSG00000198816, ZNF358, zinc finger protein 358, [Score=61.2, Expect=7e-09]} {Mouse: ENSMUSG00000070495, Ctcfl, CCCTC-binding factor (zinc finger protein)-like, [Score=63.5, Expect=9e-10]; ENSMUSG00000051413, Plagl2, pleiomorphic adenoma gene-like 2, [Score=60.8, Expect=5e-09]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=60.5, Expect=8e-09]} {Celegans: WBGene00013734, Y111B2A.10, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_11201_0_1, dd_Smed_v6_11201_0_1, [Score=68.6, Expect=1e-11]} {RNA1509_11247, RNA1509_18625, RNA1509_24136} {RNA1310_3056.1, RNA1509_11247, RNA1509_18625, RNA1509_24136} {RNA1509_11247, RNA1509_18625, RNA1509_24136, RNA815_16992}
21. MligTC455_33949 219 4.56 Mlig455_030087, Mlig455_043225

Neo: -

Age: Down-Down-Down

 THAP9 0.952 - - 0.952 - - -

Mlig455_030087 {REF} {Length: 5685} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=117.4]; Transposase protein [PF12017.10, score=28.9]} {Human: ENSG00000168152, THAP9, THAP domain containing 9, [Score=212, Expect=5e-56]} {RNA1509_45496} {RNA1310_1582} {RNA815_252.1}

Mlig455_043225 {REF} {Length: 3516} {RNA1509_29843} {RNA1310_14922.1} {RNA815_27718}
22. MligTC455_25623 363 7.56 Mlig455_040317

Neo: -

Age: -

 EXOC2 0.95 - - 0.950 - - - Mlig455_040317 {REF} {Length: 3634} {TRANSSPLICED} {Pfam: Exocyst complex component Sec5 [PF15469.8, score=183.5]; IPT/TIG domain [PF01833.26, score=36.0]} {Human: ENSG00000112685, EXOC2, exocyst complex component 2, [RH, Score=139, Expect=4e-33]} {Mouse: ENSMUSG00000021357, Exoc2, exocyst complex component 2, [RH, Score=133, Expect=3e-31]} {Dmel: FBgn0266670, Sec5, Secretory 5, [RH, Score=154, Expect=6e-38]} {Celegans: WBGene00004752, sec-5, Exocyst complex component 2, [RH, Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_3648_0_1, dd_Smed_v6_3648_0_1, [RH, Score=161, Expect=1e-40]} {RNA1509_37652, RNA1509_7460} {RNA1310_2755.2, RNA1509_37652, RNA1509_7460} {RNA1509_37652, RNA1509_7460, RNA815_3813.1}
23. MligTC455_35427 379 7.9 Mlig455_047446

Neo: -

Age: Down-Up-Down

 COG2 0.95 - - 0.950 - - - Mlig455_047446 {REF} {Length: 3609} {TRANSSPLICED} {Pfam: COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=103.4]; Domain of unknown function (DUF3510) [PF12022.10, score=95.6]} {Human: ENSG00000135775, COG2, component of oligomeric golgi complex 2, [RH, Score=285, Expect=2e-84]} {Mouse: ENSMUSG00000031979, Cog2, component of oligomeric golgi complex 2, [RH, Score=285, Expect=8e-85]} {Dmel: FBgn0026634, ldlCp, ldlCp-related protein, [RH, Score=201, Expect=9e-55]} {Celegans: WBGene00000585, cogc-2, Conserved oligomeric Golgi complex subunit 2, [RH, Score=135, Expect=1e-32]} {Smed: dd_Smed_v6_5210_0_1, dd_Smed_v6_5210_0_1, [RH, Score=283, Expect=2e-84]} {RNA1509_17078} {RNA1310_5891} {RNA815_9043.1}
24. MligTC455_47797 540 11.25 Mlig455_026443, Mlig455_026475

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.381

 TMEM222 0.95 - - 0.950 - - -

Mlig455_026443 {REF} {Length: 6387} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF778) [PF05608.14, score=78.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.0]; Ring finger domain [PF13639.8, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.1]} {Human: ENSG00000186501, TMEM222, transmembrane protein 222, [Score=129, Expect=3e-34]} {Mouse: ENSMUSG00000028857, Tmem222, transmembrane protein 222, [Score=124, Expect=2e-32]} {Dmel: FBgn0032000, CG8372, [Score=118, Expect=8e-31]} {Celegans: WBGene00019221, H20J04.6, [Score=124, Expect=5e-33]} {Smed: dd_Smed_v6_1946_0_2, dd_Smed_v6_1946_0_2, [Score=134, Expect=8e-37]} {RNA1509_32293} {RNA1310_12215.2} {RNA815_8332}

Mlig455_026475 {REF} {Length: 2505} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.9]; Ring finger domain [PF13639.8, score=23.2]} {RNA1509_32293} {RNA1310_12215.2, RNA1509_32293} {RNA1509_32293, RNA815_8332}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA