TomoSeq data search

Data search

Results for MligTC455_33242

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33242

38726

806.80

Mlig455_039321

Neo: -

Age: -

Regeneration-downregulated BL: -1.536

Regeneration-depleted BL: -1.536

Mlig455_039321 {REF} {Length: 3983} {Smed: dd_Smed_v6_23342_0_1, dd_Smed_v6_23342_0_1, [RH, Score=57.4, Expect=5e-12]} {RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1310_14249, RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1509_313, RNA1509_32450, RNA1509_340, RNA815_20483.1}

Cumulative graph for MligTC455_33242

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.653	9.695	0.11993	0.71177
RegionR2	0.239	9.695	0.51470	0.89124
RegionR3	0.874	9.695	0.00652	0.11374
RegionR4	0.506	9.695	0.16740	0.42929
RegionR5	0.103	9.695	0.75518	1.00000
RegionR6	0.069	9.695	0.83680	1.00000
RegionR7	-0.326	9.695	0.33510	0.96944
RegionR8	-0.812	9.695	0.02624	0.31601

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.232	9.695	0.62893	1.00000
RegenerationR2	-0.121	9.695	0.78198	0.98388
RegenerationR3	-0.867	9.695	0.04855	0.38333
RegenerationR4	-0.803	9.695	0.07734	0.44225
RegenerationR5	-0.35	9.695	0.42600	0.81517
RegenerationR6	-1.383	9.695	0.00193	0.04998
RegenerationBL	-1.536	9.695	0.00013	0.00536	Specific for BL: -1.536
RegenerationTP	-0.976	9.695	0.01786	0.22943

Genes with expression patterns similar to MligTC455_33242

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33242	38726	806.8	Mlig455_039321	Neo: - Age: - Regeneration-downregulated BL: -1.536 Regeneration-depleted BL: -1.536		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039321 {REF} {Length: 3983} {Smed: dd_Smed_v6_23342_0_1, dd_Smed_v6_23342_0_1, [RH, Score=57.4, Expect=5e-12]} {RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1310_14249, RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1509_313, RNA1509_32450, RNA1509_340, RNA815_20483.1}
2.	MligTC455_27940	75506	1573.05	Mlig455_045909	Neo: - Age: Down-Up-Down		1.704	-	0.749	0.955	-	-	-	Mlig455_045909 {REF} {Length: 937} {RNA1509_22026} {RNA1310_53541} {RNA815_18911.1}
3.	MligTC455_27941	75529	1573.52	Mlig455_045960	Neo: - Age: logFC(26M/2M)=-1.009		1.704	-	0.749	0.955	-	-	-	Mlig455_045960 {REF} {Length: 705} {RNA1509_6876} {RNA1310_53541} {RNA815_18911.1}
4.	MligTC455_27943	82204	1712.59	Mlig455_063231	Neo: - Age: logFC(26M/2M)=-0.903		1.704	-	0.752	0.952	-	-	-	Mlig455_063231 {REF} {Length: 978} {RNA1509_5391} {RNA1310_50006.1} {RNA815_18818.1}
5.	MligTC455_27944	82649	1721.85	Mlig455_067360	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.202		1.694	-	0.743	0.951	-	-	-	Mlig455_067360 {REF} {Length: 1112} {RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468} {RNA1310_50006.1, RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468} {RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468, RNA815_18818.1}
6.	MligTC455_27942	82849	1726.02	Mlig455_062028	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.714		1.686	-	0.735	0.951	-	-	-	Mlig455_062028 {REF} {Length: 2411} {RNA1509_5391} {RNA1310_50006.1} {RNA815_18818.1}
7.	MligTC455_42089	2017	42.02	Mlig455_039671	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.579 Region-enriched R4: 1.250/0.00077 Region-enriched R3: 1.030/0.00188	CALM2	1.67	-	-	-	0.707	0.963	-	Mlig455_039671 {REF} {Length: 1183} {Pfam: EF hand [PF00036.34, score=95.7]; EF-hand domain [PF13405.8, score=88.1]; EF-hand domain pair [PF13499.8, score=88.0]; EF hand [PF13202.8, score=67.8]; EF-hand domain pair [PF13833.8, score=67.7]; Caleosin related protein [PF05042.15, score=30.7]; EF-hand domain [PF14658.8, score=29.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=22.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.7]; Dockerin type I domain [PF00404.20, score=19.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=146, Expect=6e-45]; ENSG00000160014, CALM3, calmodulin 3, [Score=146, Expect=6e-45]; ENSG00000198668, CALM1, calmodulin 1, [Score=146, Expect=5e-45]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=146, Expect=4e-45]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=146, Expect=4e-45]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=146, Expect=4e-45]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=139, Expect=2e-42]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=145, Expect=7e-45]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=145, Expect=7e-45]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=145, Expect=5e-45]} {RNA1509_16438, RNA1509_36384, RNA1509_8935} {RNA1310_33320, RNA1509_16438, RNA1509_36384, RNA1509_8935} {RNA1509_16438, RNA1509_36384, RNA1509_8935, RNA815_16618}
8.	MligTC455_37631	434	9.05	Mlig455_048228	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_048228 {REF} {Length: 1576} {NoTransDecoderORF} {RNA1509_25621} {RNA1310_23576.1, RNA1509_25621} {RNA1509_25621, RNA815_49488}
9.	MligTC455_01819	14	0.3	Mlig455_059785	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_059785 {REF} {Length: 1348} {RNA1310_113229}
10.	MligTC455_35002	390	8.12	Mlig455_070372	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.711	SVEP1	0.956	-	-	-	-	0.956	-	Mlig455_070372 {REF} {Length: 1042} {Pfam: EGF-like domain [PF00008.29, score=33.8]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=51.6, Expect=3e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0004647, N, Notch, [Score=50.1, Expect=4e-07]} {RNA1509_29817} {RNA1310_28236} {RNA815_11876.1}

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