TomoSeq data search

Data search

Results for MligTC455_37631

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37631

434

9.05

Mlig455_048228

Neo: -

Age: -

Mlig455_048228 {REF} {Length: 1576} {NoTransDecoderORF} {RNA1509_25621} {RNA1310_23576.1, RNA1509_25621} {RNA1509_25621, RNA815_49488}

Cumulative graph for MligTC455_37631

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.087	3.486	0.05992	0.56264
RegionR2	1.615	3.486	0.15593	0.49434
RegionR3	1.257	3.486	0.20333	0.74332
RegionR4	0.325	3.486	0.73146	1.00000
RegionR5	0.794	3.486	0.43823	0.79861
RegionR6	1.214	3.486	0.24615	0.83183
RegionR7	1.427	3.486	0.20165	0.81023
RegionR8	0.455	3.486	0.69709	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.897	3.486	0.23404	0.96368
RegenerationR2	0.065	3.486	0.94389	1.00000
RegenerationR3	0.4	3.486	0.68362	0.94143
RegenerationR4	-0.401	3.486	0.68403	0.94676
RegenerationR5	-0.175	3.486	0.84552	1.00000
RegenerationR6	-0.044	3.486	0.96277	1.00000
RegenerationBL	0.289	3.486	0.73631	1.00000
RegenerationTP	-2.57	3.486	0.04263	0.34273

Genes with expression patterns similar to MligTC455_37631

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37631	434	9.05	Mlig455_048228	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048228 {REF} {Length: 1576} {NoTransDecoderORF} {RNA1509_25621} {RNA1310_23576.1, RNA1509_25621} {RNA1509_25621, RNA815_49488}
2.	MligTC455_28293	39147	815.55	Mlig455_005203	Neo: - Age: Down-Down-Up		1.725	-	0.734	-	-	-	0.991	Mlig455_005203 {REF} {Length: 3375} {RNA1509_1933} {RNA1310_32718, RNA1509_1933} {RNA1509_1933, RNA815_15584}
3.	MligTC455_36128	429	8.94	Mlig455_066220	Neo: - Age: Up-Down-Down	MADD	0.98	-	-	-	-	0.980	-	Mlig455_066220 {REF} {Length: 5775} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=101.4]; uDENN domain [PF03456.20, score=39.7]} {Human: ENSG00000110514, MADD, MAP kinase activating death domain, [Score=341, Expect=4e-96]} {Mouse: ENSMUSG00000040687, Madd, MAP-kinase activating death domain, [Score=339, Expect=6e-96]} {Dmel: FBgn0030613, Rab3-GEF, Rab3 GDP-GTP exchange factor, [Score=337, Expect=6e-95]} {Celegans: WBGene00000086, aex-3, MAP kinase-activating death domain protein, [Score=378, Expect=7e-110]} {Smed: dd_Smed_v6_8355_0_1, dd_Smed_v6_8355_0_1, [Score=436, Expect=2e-137]} {RNA1509_19227} {RNA1310_4163, RNA1509_19227} {RNA1509_19227, RNA815_25214}
4.	MligTC455_02519	307	6.39	Mlig455_053862, Mlig455_055346	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.845 Region-enriched R4: 2.921/0.02705		0.975	-	-	-	-	-	0.975	Mlig455_053862 {REF} {Length: 3215} {RNA1509_29842} {RNA1310_31370.1} {RNA815_11432} Mlig455_055346 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_40701} {RNA1310_25832} {RNA815_32380}
5.	MligTC455_28022	319	6.65	Mlig455_042317	Neo: - Age: -		0.971	-	-	-	-	-	0.971	Mlig455_042317 {REF} {Length: 246} {NoTransDecoderORF} {RNA1509_117} {RNA1310_851.1} {RNA815_6853}
6.	MligTC455_33242	38726	806.8	Mlig455_039321	Neo: - Age: - Regeneration-downregulated BL: -1.536 Regeneration-depleted BL: -1.536		0.964	-	-	-	-	-	0.964	Mlig455_039321 {REF} {Length: 3983} {Smed: dd_Smed_v6_23342_0_1, dd_Smed_v6_23342_0_1, [RH, Score=57.4, Expect=5e-12]} {RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1310_14249, RNA1509_313, RNA1509_32450, RNA1509_340} {RNA1509_313, RNA1509_32450, RNA1509_340, RNA815_20483.1}
7.	MligTC455_28402	3882	80.88	Mlig455_060433	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_060433 {REF} {Length: 111} {NoTransDecoderORF} {RNA1509_39915} {RNA1310_67753} {RNA815_52664}
8.	MligTC455_38191	2400	50.01	Mlig455_017874	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.876	CYP2J2	0.953	-	-	-	-	0.953	-	Mlig455_017874 {REF} {Length: 1877} {Pfam: Cytochrome P450 [PF00067.24, score=330.9]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=257, Expect=2e-79]; ENSG00000130649, CYP2E1, cytochrome P450 family 2 subfamily E member 1, [Score=249, Expect=2e-76]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=247, Expect=1e-75]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=246, Expect=1e-74]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=265, Expect=2e-82]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=254, Expect=2e-78]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=252, Expect=1e-77]} {Dmel: FBgn0036910, Cyp305a1, [Score=221, Expect=8e-66]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=240, Expect=3e-73]} {Smed: dd_Smed_v6_2083_0_1, dd_Smed_v6_2083_0_1, [Score=270, Expect=1e-84]} {RNA1509_13389, RNA1509_33434} {RNA1310_15633.1, RNA1509_33434} {RNA1509_33434, RNA815_5888.1}
9.	MligTC455_18662	26	0.53	Mlig455_027064	Neo: - Age: Up-Down-Down	CEP290	0.951	-	-	-	-	0.951	-	Mlig455_027064 {REF} {Length: 7641} {Pfam: Coiled-coil region of centrosome protein CE290 [PF16574.7, score=98.4]; Autophagy protein 16 (ATG16) [PF08614.13, score=21.6]; Leucine zipper [PF15294.8, score=21.2]; SWI5-dependent HO expression protein 3 [PF17078.7, score=19.2]} {Human: ENSG00000198707, CEP290, centrosomal protein 290, [RH, Score=997, Expect=0.0]} {Mouse: ENSMUSG00000019971, Cep290, centrosomal protein 290, [RH, Score=984, Expect=0.0]} {Smed: dd_Smed_v6_7145_0_1, dd_Smed_v6_7145_0_1, [RH, Score=1253, Expect=0.0]} {RNA1509_1157} {RNA1310_349} {RNA815_113}

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