TomoSeq data search

Data search

Results for MligTC455_33245

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33245	63	1.31	Mlig455_070611	Neo: - Age: Down-Up-Down	ATMIN	Mlig455_070611 {REF} {Length: 4464} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.0]; C2H2-type zinc finger [PF13894.8, score=21.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.9]} {Human: ENSG00000166454, ATMIN, ATM interactor, [RH, Score=75.5, Expect=8e-14]} {Mouse: ENSMUSG00000047388, Atmin, ATM interactor, [RH, Score=77.4, Expect=2e-14]} {Celegans: WBGene00016427, C34H4.5, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_7949_0_1, dd_Smed_v6_7949_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_15608, RNA1509_34807} {RNA1310_15728.1, RNA1509_34807} {RNA1509_34807, RNA815_11525.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33245

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.469	1.449	0.99976	1.00000
RegionR2	-0.247	1.449	0.85805	1.00000
RegionR3	1.539	1.449	0.21037	0.75183
RegionR4	1.126	1.449	0.42250	0.75069
RegionR5	1.935	1.449	0.07481	0.24971
RegionR6	1.634	1.449	0.20478	0.77920
RegionR7	-3.747	1.449	1.00000	1.00000
RegionR8	0.23	1.449	0.75403	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.792	1.449	0.99983	1.00000
RegenerationR2	0.515	1.449	0.79819	0.98919
RegenerationR3	-0.318	1.449	0.82927	0.99040
RegenerationR4	-0.473	1.449	0.72852	0.96431
RegenerationR5	-0.687	1.449	0.59742	0.90904
RegenerationR6	-0.333	1.449	0.89268	1.00000
RegenerationBL	1.93	1.449	0.38858	0.75692
RegenerationTP	-1.128	1.449	1.00000	1.00000

Genes with expression patterns similar to MligTC455_33245

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33245	63	1.31	Mlig455_070611	Neo: - Age: Down-Up-Down	ATMIN	4	1.000	1.000	-	-	1.000	1.000	Mlig455_070611 {REF} {Length: 4464} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.0]; C2H2-type zinc finger [PF13894.8, score=21.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.9]} {Human: ENSG00000166454, ATMIN, ATM interactor, [RH, Score=75.5, Expect=8e-14]} {Mouse: ENSMUSG00000047388, Atmin, ATM interactor, [RH, Score=77.4, Expect=2e-14]} {Celegans: WBGene00016427, C34H4.5, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_7949_0_1, dd_Smed_v6_7949_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_15608, RNA1509_34807} {RNA1310_15728.1, RNA1509_34807} {RNA1509_34807, RNA815_11525.1}
2.	MligTC455_21657	84	1.76	Mlig455_048610	Neo: - Age: -	LMO1	0.976	-	-	-	-	0.976	-	Mlig455_048610 {REF} {Length: 2071} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845}
3.	MligTC455_22776	28	0.59	Mlig455_001677	Neo: - Age: -	PRKAA2	0.965	-	-	-	-	0.965	-	Mlig455_001677 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.5]; Kinase-like [PF14531.8, score=27.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; RIO1 family [PF01163.24, score=21.7]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=560, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=555, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=531, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=505, Expect=1e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=551, Expect=0.0]} {RNA1509_12822, RNA1509_58504} {RNA1310_12328.1, RNA1509_12822, RNA1509_58504} {RNA1509_12822, RNA1509_58504, RNA815_3277.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33245

1.31

Mlig455_070611

Neo: -

Age: Down-Up-Down

ATMIN

1.000

MligTC455_21657

1.76

Mlig455_048610

Neo: -

Age: -

LMO1

0.976

Mlig455_048610 {REF} {Length: 2071} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845}

MligTC455_22776

0.59

Mlig455_001677

Neo: -

Age: -

PRKAA2

0.965

Mlig455_001677 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.5]; Kinase-like [PF14531.8, score=27.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; RIO1 family [PF01163.24, score=21.7]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=560, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=555, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=531, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=505, Expect=1e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=551, Expect=0.0]} {RNA1509_12822, RNA1509_58504} {RNA1310_12328.1, RNA1509_12822, RNA1509_58504} {RNA1509_12822, RNA1509_58504, RNA815_3277.1}