Data search
Results for MligTC455_33304
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33304 | 14 | 0.30 | Mlig455_031937 | Neo: Irradiation Age: Up-Down-Down |
SVEP1 | Mlig455_031937 {REF} {Length: 9886} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=132.0]; WSC domain [PF01822.21, score=27.9]; Polyphosphate kinase C-terminal domain 1 [PF17941.3, score=20.0]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=73.9, Expect=5e-12]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=77.0, Expect=3e-13]} {RNA1509_52468} {RNA1310_25459.1} {RNA815_495.1} |
Cumulative graph for MligTC455_33304
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -8.567 | 0.614 | 0.99960 | 1.00000 | |
| RegionR2 | 5.864 | 0.614 | 0.99977 | 1.00000 | |
| RegionR3 | 2.302 | 0.614 | 0.99987 | 1.00000 | |
| RegionR4 | -3.553 | 0.614 | 0.99985 | 1.00000 | |
| RegionR5 | 0.822 | 0.614 | 0.99993 | 1.00000 | |
| RegionR6 | 2.281 | 0.614 | 0.99990 | 1.00000 | |
| RegionR7 | 1.159 | 0.614 | 0.99995 | 1.00000 | |
| RegionR8 | -0.31 | 0.614 | 0.99993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.968 | 0.614 | 0.99989 | 1.00000 | |
| RegenerationR2 | 2.521 | 0.614 | 0.04345 | 0.34401 | |
| RegenerationR3 | 4.925 | 0.614 | 0.00555 | 0.13434 | |
| RegenerationR4 | 6.635 | 0.614 | 0.00069 | 0.02721 | |
| RegenerationR5 | 1.862 | 0.614 | 0.99981 | 1.00000 | |
| RegenerationR6 | 4.708 | 0.614 | 0.00778 | 0.10772 | |
| RegenerationBL | 2.078 | 0.614 | 0.99990 | 1.00000 | |
| RegenerationTP | 2.305 | 0.614 | 0.99987 | 1.00000 |
Genes with expression patterns similar to MligTC455_33304
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33304 | 14 | 0.3 | Mlig455_031937 | Neo: Irradiation Age: Up-Down-Down |
SVEP1 | 1 | - | - | - | - | 1.000 | - | Mlig455_031937 {REF} {Length: 9886} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=132.0]; WSC domain [PF01822.21, score=27.9]; Polyphosphate kinase C-terminal domain 1 [PF17941.3, score=20.0]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=73.9, Expect=5e-12]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=77.0, Expect=3e-13]} {RNA1509_52468} {RNA1310_25459.1} {RNA815_495.1} |
| 2. | MligTC455_07711 | 15 | 0.31 | Mlig455_035975 | Neo: - Age: - |
0.99 | - | - | - | - | 0.990 | - | Mlig455_035975 {REF} {Length: 476} {NoTransDecoderORF} {RNA1509_35506} {RNA1310_3152.3} {RNA815_24414} | |
| 3. | MligTC455_29620 | 214 | 4.45 | Mlig455_046746, Mlig455_046767, Mlig455_069972 | Neo: - Age: Up-Down-Up |
EPHA1, KSR1 | 0.989 | - | - | - | - | 0.989 | - | Mlig455_046746 {REF} {Length: 3906} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.5]; Protein kinase domain [PF00069.27, score=65.0]; Kinase-like [PF14531.8, score=20.1]} {Human: ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=126, Expect=3e-29]; ENSG00000171435, KSR2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=130, Expect=1e-30]; ENSMUSG00000061578, Ksr2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Dmel: FBgn0015402, ksr, kinase suppressor of ras, [Score=151, Expect=2e-37]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [RH, Score=331, Expect=1e-102]} {RNA1509_38394} {RNA1310_3636} {RNA815_15015.1} Mlig455_046767 {REF} {Length: 3979} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.5]; Protein kinase domain [PF00069.27, score=65.0]; Kinase-like [PF14531.8, score=20.1]} {Human: ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=125, Expect=4e-29]; ENSG00000171435, KSR2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=130, Expect=1e-30]; ENSMUSG00000061578, Ksr2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Dmel: FBgn0015402, ksr, kinase suppressor of ras, [Score=152, Expect=2e-37]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [RH, Score=329, Expect=5e-102]} {RNA1509_38394} {RNA1310_3636} {RNA815_15015.1} Mlig455_069972 {REF} {Length: 1901} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=60.7]; Protein kinase domain [PF00069.27, score=33.2]} {Human: ENSG00000146904, EPHA1, EPH receptor A1, [Score=50.8, Expect=1e-07]; ENSG00000284816, EPHA1, EPH receptor A1, [Score=50.8, Expect=1e-07]; ENSG00000120899, PTK2B, protein tyrosine kinase 2 beta, [Score=50.1, Expect=3e-07]; ENSG00000047936, ROS1, ROS proto-oncogene 1, receptor tyrosine kinase, [Score=48.9, Expect=7e-07]; ENSG00000140443, IGF1R, insulin like growth factor 1 receptor, [Score=48.5, Expect=1e-06]} {Mouse: ENSMUSG00000029859, Epha1, Eph receptor A1, [Score=51.6, Expect=5e-08]; ENSMUSG00000003534, Ddr1, discoidin domain receptor family, member 1, [Score=50.8, Expect=1e-07]; ENSMUSG00000014361, Mertk, c-mer proto-oncogene tyrosine kinase, [Score=50.8, Expect=1e-07]; ENSMUSG00000028876, Epha10, Eph receptor A10, [Score=49.7, Expect=2e-07]; ENSMUSG00000059456, Ptk2b, PTK2 protein tyrosine kinase 2 beta, [Score=49.3, Expect=3e-07]} {Dmel: FBgn0003366, sev, sevenless, [Score=52.8, Expect=2e-08]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=53.5, Expect=6e-09]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=125, Expect=5e-34]} {RNA1509_38394} {RNA1310_34788} {RNA815_31369} |
| 4. | MligTC455_53117 | 86 | 1.79 | Mlig455_029454 | Neo: - Age: logFC(26M/2M)=-0.687 |
CHRNA4 | 0.983 | - | - | - | - | 0.983 | - | Mlig455_029454 {REF} {Length: 3116} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=160.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=110.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.7]} {Human: ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=210, Expect=3e-59]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=210, Expect=5e-60]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=211, Expect=1e-59]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=209, Expect=5e-60]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=207, Expect=5e-60]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=204, Expect=5e-58]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=204, Expect=2e-56]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=202, Expect=1e-57]} {Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [RH, Score=451, Expect=1e-152]} {RNA1509_18288} {RNA1310_21192} {RNA815_24334} |
| 5. | MligTC455_19382 | 51 | 1.07 | Mlig455_032372 | Neo: - Age: - Region-enriched R2: 7.387/0.00125 |
GABBR2 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_032372 {REF} {Length: 3616} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=166.5]; Receptor family ligand binding region [PF01094.30, score=93.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=323, Expect=4e-95]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=322, Expect=7e-95]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=352, Expect=3e-104]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=317, Expect=3e-94]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=1e-44]} {RNA1509_48457} {RNA1310_28999} {RNA815_30452} |
| 6. | MligTC455_37203 | 15 | 0.3 | Mlig455_016211 | Neo: - Age: - |
TRAF2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_016211 {REF} {Length: 3900} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=30.7]} {Human: ENSG00000127191, TRAF2, TNF receptor associated factor 2, [Score=58.5, Expect=6e-09]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=59.3, Expect=3e-09]} {Smed: dd_Smed_v6_17551_0_2, dd_Smed_v6_17551_0_2, [Score=50.8, Expect=5e-07]} {RNA1509_7329} {RNA1310_29315} {RNA815_5375} |
| 7. | MligTC455_19628 | 30 | 0.63 | Mlig455_029214, Mlig455_029236 | Neo: - Age: - |
PCDH17, PCDHGB7 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_029214 {REF} {Length: 3381} {Pfam: Cadherin domain [PF00028.19, score=242.3]; Cadherin-like [PF08266.14, score=45.9]; Cadherin-like [PF16184.7, score=33.1]} {Human: ENSG00000118946, PCDH17, protocadherin 17, [RH, Score=283, Expect=5e-81]} {Mouse: ENSMUSG00000035566, Pcdh17, protocadherin 17, [RH, Score=283, Expect=1e-79]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [RH, Score=276, Expect=6e-78]; ENSMUSG00000102918, Pcdhgc3, protocadherin gamma subfamily C, 3, [RH, Score=269, Expect=6e-76]} {Dmel: FBgn0284247, ds, dachsous, [Score=242, Expect=2e-65]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=181, Expect=5e-46]} {Smed: dd_Smed_v6_14117_0_1, dd_Smed_v6_14117_0_1, [Score=379, Expect=3e-115]} {RNA1310_67542} {RNA815_48433} Mlig455_029236 {REF} {Length: 3402} {Pfam: Cadherin domain [PF00028.19, score=93.3]} {Human: ENSG00000254122, PCDHGB7, protocadherin gamma subfamily B, 7, [Score=100, Expect=4e-22]; ENSG00000254221, PCDHGB1, protocadherin gamma subfamily B, 1, [Score=99.8, Expect=8e-22]; ENSG00000240184, PCDHGC3, protocadherin gamma subfamily C, 3, [Score=96.7, Expect=8e-21]} {Mouse: ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [Score=111, Expect=9e-26]} {Dmel: FBgn0284247, ds, dachsous, [Score=96.7, Expect=5e-21]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=74.7, Expect=4e-14]} {Smed: dd_Smed_v6_6251_0_1, dd_Smed_v6_6251_0_1, [Score=114, Expect=3e-27]} {RNA1310_67542} {RNA815_48433} |
| 8. | MligTC455_21246 | 58 | 1.21 | Mlig455_023143, Mlig455_023298 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_023143 {REF} {Length: 3802} {Pfam: SAP domain [PF02037.29, score=30.6]; Phage integrase family [PF00589.24, score=28.3]} {RNA1509_29350} {RNA1310_3424.1} {RNA815_6756.1} Mlig455_023298 {REF} {Length: 3744} {Pfam: SAP domain [PF02037.29, score=30.6]; Phage integrase family [PF00589.24, score=28.3]} {RNA1509_29350} {RNA1310_3424.1} {RNA815_6756.1} |
|
| 9. | MligTC455_52036 | 13 | 0.27 | Mlig455_068246, Mlig455_068266 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_068246 {REF} {Length: 593} {NoTransDecoderORF} {RNA1509_46135} {RNA1310_32009.2} Mlig455_068266 {REF} {Length: 787} {NoTransDecoderORF} {RNA1509_46135} {RNA1310_32009.2} |
|
| 10. | MligTC455_43389 | 18 | 0.38 | Mlig455_019091 | Neo: - Age: - |
PRKAR2A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_019091 {REF} {Length: 2410} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=122.4]; Regulatory subunit of type II PKA R-subunit [PF02197.19, score=40.5]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=305, Expect=2e-100]; ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=313, Expect=9e-104]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=335, Expect=1e-112]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=219, Expect=2e-68]} {Smed: dd_Smed_v6_4188_0_1, dd_Smed_v6_4188_0_1, [Score=335, Expect=6e-113]} {RNA1509_34470} {RNA1310_27777} {RNA815_5628} |